Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_020104.1 Length=1021348 Score E Sequences producing significant alignments: (Bits) Value seq8878 235 4e-56 seq11257 150 1e-30 seq3663 141 6e-28 seq1324 127 1e-23 seq14623 125 5e-23 seq23314 122 6e-22 seq14357 113 3e-19 seq32362 96.9 2e-14 seq25614 95.1 8e-14 seq31848 89.7 3e-12 seq2529 86.0 4e-11 >seq8878 Length=1618 Score = 235 bits (260), Expect = 4e-56 Identities = 595/887 (67%), Gaps = 26/887 (3%) Strand=Plus/Minus Query 475309 GGGAACTCATGACGTAACTTTACTATCACTCGAAGATGGTCTTTTCTCTGTAAGAGCAAC 475368 ||||||| ||| || || || || | | ||||| ||| | || || | || || Sbjct 879 GGGAACTTTTGATGTTTCTCTATTAACTATTGAAGAGGGTATCTTTGAGGTCAAGGCCAC 820 Query 475369 AGCTGGAGATTCACATCTTGGTGGTGAAGATTTTGATAATAGACTTGT--ATCATGGTGT 475426 || |||||| | ||| | ||||||||||| ||||||||| | | || | ||| | | Sbjct 819 GGCAGGAGATACCCATTTGGGTGGTGAAGACTTTGATAATCGGTTAGTTAACCAT--TTT 762 Query 475427 GTTGAAGATTTCAAGAGGAAAAATAAAGTTGATCTTTCAACATCTGCTAAAGCA-TTAAG 475485 | | || || || || ||| |||| |||||| | ||| | ||| ||| | Sbjct 761 ACTCAGGAATTTAAAAGAAAATATAAGAAAGATCTTGGTAGCAGTGCAAGAGCCCTTAGG 702 Query 475486 ACGTCTTAGAACTGCTTGTGAACGTGCTAAGCGAGCTCTTTCTTCTGCTACTCAAACTAC 475545 | || | ||||| || |||||| | |||||| || | | ||||| || |||| ||||| Sbjct 701 AGGT-TGAGAACAGCCTGTGAAAGGGCTAAGAGAACGTTGTCTTCAACTGCTCAGACTAC 643 Query 475546 TGTTGAAGTTGATTCTCTTTTTGAAGGAATTGATTATAATACTC--TTATTACAAGGGCT 475603 |||| |||||||| | | ||||||||||||| | ||||| ||||| ||||| Sbjct 642 CATTGAGATTGATTCTTTGTACGAAGGAATTGATTTT--TACTCCACCATTACTAGGGCC 585 Query 475604 AAATTTGAAGATATTTGTTCTGATCTCTTTAGAAAAACAATTGAACCCGTTGAACAAGT- 475662 | |||||| || | ||||| ||||| ||| || || || |||| | |||| Sbjct 584 AGATTTGAGGAGCTCAACATGGATCTGTTTAGGAAATGCATGGAGCCTGTTG-AGAAGTG 526 Query 475663 TCTCAGAGATTCTAAACTTGACAA-ATCACAAGTCCATGAAATTGTTCTTGTAGGAGGTT 475721 | | || ||| | || | || || | ||| || ||||| |||| ||||| ||||| | Sbjct 525 TTTGAGGGATGCCAAGATGGATAAGAGCAC-TGTTCATGATGTTGTGCTTGTGGGAGGAT 467 Query 475722 CAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATAT-TTTAATGGTAAAAAGTTA 475780 | || | || || ||| | || ||| || || || | || |||||||| || | Sbjct 466 CTACCCGTATCCCGAAAGT-GCAGCAATTGTTGCAGGATTTCTTCAATGGTAAGGAGCT- 409 Query 475781 AATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCTGTCCAAGCAGCTA 475838 || ||| ||| ||||| |||||||||||||| ||||| ||||| || ||||| || | Sbjct 408 -CTGCAAGAGTATCAATCCCGATGAAGCTGTTGCTTATGGTGCTGCGGTTCAAGCTGCAA 350 Query 475839 TTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTTGACGTAACTCCAC 475898 || || || || | | ||||| | | | || | ||| ||||||| ||||| | Sbjct 349 TTCTAAGTGGAGAAGGAAATGAGAAGGTGCAAGACCTTTTGCTTCTTGACGTCACTCCCC 290 Query 475899 TTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATTGACAGAAATACTC 475958 | ||| |||| | ||||| | ||||| | |||||| | | || || || || Sbjct 289 TGTCACTAGGATTGGAAACTGCCGGAGGAGTGATGACTGTTTTGATCCCGAGGAACACAA 230 Query 475959 CTATCCCATGCAAAAAATCAAAAGTATTTTCCACTTATTCTGATAATCAAACAACTGTAA 476018 | || || || ||| | |||| || ||||| || ||||| ||||| | ||| Sbjct 229 CGATTCCTACGAAGAAAGAACAAGTCTTCTCCACATACTCTGACAATCAGCCTGGTGTCT 170 Query 476019 CCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAACAAACTT---GGAA 476075 |||||| | ||||||||||||||| | ||||| | | ||||| ||| || | Sbjct 169 TGATCCAAGTATTTGAAGGTGAAAGAGCAAGAACTAAGG---ACAACAATCTTTTGGGTA 113 Query 476076 CTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAATTGAAGTTACTT 476135 ||| | | ||||||||||||||||| || || || ||||| || ||| | Sbjct 112 AGTTTGAGTTGTCTGGTATTCCTCCTGCTCCAAGGGGTGTGCCTCAGATCACTGTTTGCT 53 Query 476136 TTGATATTGATGCAAATGGTATTCTTAATGTTACTGCTTGTGATAAA 476182 |||| |||||||| |||||||| || || || ||||| |||||| Sbjct 52 TTGACATTGATGCCAATGGTATCCTGAACGTCTCTGCTGAGGATAAA 6 >seq11257 Length=1275 Score = 150 bits (166), Expect = 1e-30 Identities = 398/590 (67%), Gaps = 16/590 (3%) Strand=Plus/Minus Query 475592 ATTACAAGGGCTAAATTTGAAGATATTTGTTCTG-ATCTCTTTAGAAAAACAATTGAACC 475650 ||||| || |||| || ||||| ||| | || |||| || ||||| || || || Sbjct 1249 ATTACTAGAGCTAGGTTCGAAGA-ATTGAATATGGATCTATTCAGAAAGTGTATGGAGCC 1191 Query 475651 CGTTGAACAAGT-TCTCAGAGATTCTAAACTTGACAAAT-CACAAGTCCATGAAATTGTT 475708 |||||| |||| | | |||||| |||| | || ||| | | | ||||||| ||||| Sbjct 1190 TGTTGAA-AAGTGTTTGAGAGATGCTAAGATGGATAAAAGCTCTA-TCCATGATGTTGTT 1133 Query 475709 CTTGTAGGAGGTTCAACAAGAATTCCAAAAATAAGAGAAATGCTTTCATCATAT-TTTAA 475767 | || || || || || |||||||| ||| | | | || || || | | ||||| Sbjct 1132 TTGGTTGGTGGGTCTACTAGAATTCCCAAAGTGCAACAGTTG-TTGCAGGACTTCTTTAA 1074 Query 475768 TGGTAAAAAGTTAAATGAAAGTGTA--AATCCTGATGAAGCTGTTGCATATGGAGCTGCT 475825 ||| ||| || | || ||| | | || || ||||| |||||||| ||||| ||||| Sbjct 1073 TGGGAAAGAGCTC--TGCAAGAGCATTAACCCCGATGAGGCTGTTGCCTATGGTGCTGCA 1016 Query 475826 GTCCAAGCAGCTATTTTATCAGGTCAATCAGACGAGAAACTAAATAATATTGTACTTGTT 475885 || || || |||||| || || || | ||||| | | | | ||||| || Sbjct 1015 GTGCAGGCTGCTATTCTAAGCGGAGAAGGCAATGAGAAGGTTCAAGACCTGTTACTTCTT 956 Query 475886 GACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATGACTAATCTTATT 475945 |||||| ||| || || | ||||| || |||| || || |||||||| | | ||| Sbjct 955 GACGTATATCCTCTCTCCCTTGGTCTGGAGACAGCAGGCGGTGTTATGACTGTTTTGATT 896 Query 475946 GACAGAAATACTCCTATCCCATGCAAAAAATCAAAAG-TATTTTCCACTTATTCTGATAA 476004 ||||||||| | || || | |||| || | || | || || || || || || || Sbjct 895 CCTAGAAATACTACCATTCC-TACAAAGAAAGAGCAGGTCTTCTCTACATACTCGGACAA 837 Query 476005 TCAAACAACTGTAACCATCCAAATCTTTGAAGGTGAAAGAAAATTCACTAAAGATAATAA 476064 || | ||| ||| ||| | | ||||||||| |||| | || | ||| || || Sbjct 836 CCAGCCCGGTGTTCTCATTCAAGTGTATGAAGGTGAGAGAACACGAACAAGAGACAACAA 777 Query 476065 CAAACTTGG-AACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAGGAGTTCCTCAAA 476123 | || || ||| ||| | ||||| || |||||||||||||| |||||||||| Sbjct 776 TTTGTTGGGCAAGTTTGAATTGTCT-GGTATCCCACCTGCTCCCAGAGGTGTTCCTCAAA 718 Query 476124 TTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTGCT 476173 | ||| ||||| |||||||| |||||||| | |||||| | ||| Sbjct 717 TCACAGTGTGCTTTGACATTGATGCCAATGGTATCTTGAATGTTTCGGCT 668 >seq3663 Length=3564 Score = 141 bits (156), Expect = 6e-28 Identities = 357/539 (66%), Gaps = 9/539 (2%) Strand=Plus/Plus Query 474333 TTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAAAGTAG 474392 |||| ||||| || || || || ||| || || | ||| ||||| |||| | || | Sbjct 1197 TTGGGATTGACTTGGGTACGACGTACTCATGCGTTGGTGTGTGGCAGAATGATCGCGTGG 1256 Query 474393 AAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTACTGAAA 474452 | || |||||||||||||| || ||| | || || || || ||||| | || || || | Sbjct 1257 AGATTATTGCCAATGACCAGGGCAATCGTACCACGCCGTCGTATGTGGCGTTCACGGACA 1316 Query 474453 CTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAATACTA 474512 | || | ||| ||||| ||||||||||| | |||| || || | |||||| Sbjct 1317 CGGAGCGTCTAATTGGTGATGCTGCTAAGAACCAAGTGGCCATGAACGCGCATAATACGG 1376 Query 474513 TTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATCTGATA 474572 | ||||||| ||| | ||||| || ||||| || || || || || || || | Sbjct 1377 TCTTTGATGTCAAACGTTTGATCGGACGTAAATTCACGGACACAGAGGTGCAGTCGGACA 1436 Query 474573 TGCGTCATTGGCCTTTTAAGGTGATAAATGTTGGTGGTAA-----ACCATATATAGAAGC 474627 | |||||||| ||||| || | || || ||| || || | || Sbjct 1437 TTAAGCATTGGCCGTTTAAAGTTACGCGTGGCCCTGATAACAAGCCTCAAGTAGTGGTGC 1496 Query 474628 AATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTTAGC 474687 ||| | ||| || || || |||| ||||||| | ||||| || ||||| || Sbjct 1497 AATCGA--AAGGAGAGACGAAGACATTTCAACCGGAAGAGATTTCGTCCATGGTGTTGAT 1554 Query 474688 CAAAATGAAACAAACCGC-GAGCTCATATCTTGGACAAGAAGTAACTGATGCAGTAATTA 474746 |||||| | | || ||| | || |||| || |||| | |||| || | | Sbjct 1555 TAAAATGCGCGAGATTGCAGAG-GCTTACATTGGGAAACAAGTGAAGAATGCCGTGGTGA 1613 Query 474747 CTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGAAGAATTG 474806 | ||||| || ||||| ||||| || || ||||| ||||| |||||||| ||| |||| Sbjct 1614 CGGTTCCTGCTTATTTCAATGACTCGCAGCGTCAGGCAACGAAAGATGCTGGAGTGATTG 1673 Query 474807 CAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCTTATGGT 474865 | || || || || ||||||| ||||| || ||||| || || || | || || ||| Sbjct 1674 CTGGACTGAACGTGCTACGTATCATTAACGAGCCAACTGCTGCTGCGATCGCCTACGGT 1732 >seq1324 Length=7794 Score = 127 bits (140), Expect = 1e-23 Identities = 118/150 (79%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 474727 AGTAACTGATGCAGTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAAC 474786 ||| || || ||||| ||||| ||||| || || ||||| ||| |||||||||||||||| Sbjct 6228 AGTTACAGAAGCAGTTATTACAGTTCCTGCTTACTTTAACGATGCTCAACGTCAAGCAAC 6287 Query 474787 TAAAGATGCGGGAAGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGC 474846 |||||||||||| | ||| || ||| | | ||| |||||| ||||| |||||||| || Sbjct 6288 TAAAGATGCGGGTAAAATCGCTGGTTTAGACGTTAAACGTATCATTAACGAACCAACTGC 6347 Query 474847 AGCCGCACTTGCTTATGGTCTTGATAAGAA 474876 || |||||||| | ||| | || || || Sbjct 6348 TGCTGCACTTGCGTTCGGTATGGACAAAAA 6377 Score = 89.7 bits (98), Expect = 3e-12 Identities = 91/119 (76%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 290839 TGAAGCTGCTGTTGGTTCATTTATAATTCTTAATACATCAAGACCTGCAATTTTTGCCGA 290898 || ||| || |||||||| || || || | | || || | ||| || ||||| ||| Sbjct 6354 TGCAGCAGCAGTTGGTTCGTTAATGATACGTTTAACGTCTAAACCAGCGATTTTACCCGC 6295 Query 290899 ATCTAAAGTTGCCTGGCGTTGCGCATCATTAAAATAAGCAGGGACTGTAATAACAGCTT 290957 |||| |||||| || ||||| ||||| ||||| |||||||| ||||||||||| |||| Sbjct 6294 ATCTTTAGTTGCTTGACGTTGAGCATCGTTAAAGTAAGCAGGAACTGTAATAACTGCTT 6236 >seq14623 Length=969 Score = 125 bits (138), Expect = 5e-23 Identities = 159/216 (74%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 |||||||| |||||||| || || ||| || | ||| ||||| || || |||| | Sbjct 251 AGACGGAGGACAAGATGCAGCGTGGATTCCTTCTGGATATTGTAATCGGCAAGGGTTCGG 192 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 |||||| || |||||||||||||| || ||||| ||||| || || ||||| |||||| Sbjct 191 CCATCTTCCAGCTGCTTTCCAGCAAATATCAGACGCTGTTGGTCCGGGGGAATGCCTTCC 132 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGT 480733 || || || || ||| || ||| ||||| || |||| | | | | |||||| || Sbjct 131 TTATCCTGGATTTTTGCCTTTACATTGTCAATGGTGTCAGAGCTCTCGA-CTTCAAGAGT 73 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || ||||| ||||| || ||||| ||||| Sbjct 72 GATGGTCTTGCCGGTAAGAGTTTTGACGAAGATTTG 37 Score = 113 bits (124), Expect = 3e-19 Identities = 155/214 (72%), Gaps = 2/214 (1%) Strand=Plus/Minus Query 480557 ACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTT 480616 |||||| || ||||| || || ||| || || ||| || || || || |||| | Sbjct 477 ACGGAGGACGAGATGCAGGGTTGATTCCTTTTGAATATTGTAGTCTGCCAGGGTTCGGCC 418 Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 ||||| || |||||||| ||||| || |||||||| || ||||| || ||||||||||| Sbjct 417 GTCTTCGAGCTGCTTTCCGGCAAATATCAGACGTTGCTGGTCAGGCGGGATTCCTTCCTT 358 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735 ||| || ||||| ||| ||| ||||| ||||| | | | | || || ||| || | Sbjct 357 GTCCTGGATCTTGGCTTTTACATTGTCAATGGTATCCGAGCTCTCAACTTCCAA-CGTTA 299 Query 480736 TAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || ||||| || || || || ||||| || || Sbjct 298 TCGTCTTACCAGTCAGGGTTTTGACGAAGATCTG 265 Score = 104 bits (114), Expect = 2e-16 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 |||||||| || || || | || |||||| | || ||||| || || ||||| Sbjct 707 AGACGGAGGACCAGGTGCAAGGTGGATTCTTTCTGGATGTTGTAATCGGCAAGGGTTCTA 648 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||| || || |||||||| ||||| || | ||| || || ||||| ||||| || || Sbjct 647 CCATCCTCGAGCTGCTTTCCGGCAAAGATTAAACGCTGCTGGTCAGGGGGAATGCCCTCT 588 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGT 480733 ||||| || ||||| |||||| ||||||||||| | | | | || || ||| ||| Sbjct 587 TTGTCCTGGATCTTGGCCTTGACATTATCAATAGTATCCGAGCTCTCAACTTCCAA-GGT 529 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 || || || || ||||| || ||||| ||||| || Sbjct 528 GATCGTCTTTCCAGTGAGGGTTTTAACAAAAATCTG 493 Score = 104 bits (114), Expect = 2e-16 Identities = 154/216 (71%), Gaps = 2/216 (1%) Strand=Plus/Minus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 |||||||| |||||||| | ||| |||||| || ||| || ||||| || |||| | Sbjct 935 AGACGGAGGACAAGATGCAAGGTAGATTCTTTCTGAATATTGTAGTCAGCAAGGGTTCGG 876 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 |||||| || || ||||||||||| || || || || || ||||| || || |||||| Sbjct 875 CCATCTTCGAGCTGTTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCTTCC 816 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGT 480733 ||||| || ||||| || ||| || || || || | | | | | || ||| || Sbjct 815 TTGTCCTGTATCTTAGCCTTCACATTGTCGATGGTGTCCGAGCTCTCCACTTCCAA-AGT 757 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || ||||| || || || || || || || || Sbjct 756 AATGGTCTTACCTGTTAGGGTTTTGACAAAGATCTG 721 >seq23314 Length=550 Score = 122 bits (134), Expect = 6e-22 Identities = 235/343 (69%), Gaps = 4/343 (1%) Strand=Plus/Minus Query 475874 ATTGTACTTGTTGACGTAACTCCACTTTCATTAGGTCTTGAAACAGTTGGAGGGATTATG 475933 || || ||| |||| || ||||| || ||| | || || ||||| |||| || | ||| Sbjct 379 ATCGTGCTTCTTGATGTTACTCCGCTGTCACTTGGACTGGAAACTCTTGGTGGTGTAATG 320 Query 475934 ACTAATCTTATTGACAGAAATACTCCTATCCCATGCAAAAAATCAAAAGTATTTTCCACT 475993 || || | ||| | || ||| | | ||| | |||||| | || ||||| || Sbjct 319 ACGAAAATCATTCCTCGGAACACTACACTACCAACCTCAAAATCTGAGGTGTTTTCTACG 260 Query 475994 TATTCTGATAATCAAACAACTGTAACCATCCAAATCTT-TG-AAGGTGAAAGAAAATTCA 476051 | ||||| ||| |||| ||| ||| ||| || || |||||||| || |||| Sbjct 259 GCTGCTGATGGTCAGACAAGTGTTGAAATC--AATGTTCTGCAAGGTGAACGAGAATTTG 202 Query 476052 CTAAAGATAATAACAAACTTGGAACTTTTAATCTTGAAGGTATTCCTCCTGCTCCCAGAG 476111 || || || || ||||| | |||| | || || ||||||||||||||| ||| Sbjct 201 TCAAGGACAACAAGTCGCTTGGGAGTTTTCGGTTGGATGGAATTCCTCCTGCTCCCCGAG 142 Query 476112 GAGTTCCTCAAATTGAAGTTACTTTTGATATTGATGCAAATGGTATTCTTAATGTTACTG 476171 | || |||||||| || || | ||||||||||||||||| ||||||||| || |||| Sbjct 141 GTGTCCCTCAAATAGAGGTGAAGTTTGATATTGATGCAAACGGTATTCTTTCAGTCACTG 82 Query 476172 CTTGTGATAAATCTAGTAACAAGAGTAAAAATATAACTATTAC 476214 || || ||| | | | |||| | ||||||| ||||| Sbjct 81 CTGTGGACAAAGGCACTCAAAAGAAGCAGGATATAACAATTAC 39 >seq14357 Length=991 Score = 113 bits (124), Expect = 3e-19 Identities = 392/608 (64%), Gaps = 23/608 (4%) Strand=Plus/Minus Query 474328 TGCAATTGGTATTGATTTAGGAACTACTTACAGTTGTGTAGCTGTTTGGCAAAATGGTAA 474387 ||| || ||||| ||| | || || || || || || | || ||||| ||| | Sbjct 876 TGCGATCGGTATAGATCTCGGTACCACGTATTCCTGCGTTGGGGTGTGGCAGCATGACAG 817 Query 474388 AGTAGAAATAATTGCCAATGACCAAGGTAATAGAACAACACCATCATATGTTTCTTTTAC 474447 ||| || || || |||||||||||||| || || || || || || ||||| |||| || Sbjct 816 AGTGGAGATCATCGCCAATGACCAAGGGAACAGGACCACTCCCTCCTATGTGGCTTTCAC 757 Query 474448 TGAAACTGAACATCTTATTGGAGATGCTGCTAAATATCAAGCTGCATCTAATCCTGTTAA 474507 ||| ||||| | || |||||||| || || || |||| | || |||||| || Sbjct 756 TGATACTGAGCGACTCATTGGAGACGCCGCAAAGAATCAGGTCGCCATGAATCCTACCAA 697 Query 474508 TACTATTTTTGATGCTAAAAGATTGATTGGTCGTAATTTTGATGATACCACTGTCCAATC 474567 ||| |||||||||| || ||||||||||| | ||| ||| || ||||| || Sbjct 696 TACCGTTTTTGATGCCAAGAGATTGATTGGAAGGCGTTTCAGTGACACTACTGTTCAGAG 637 Query 474568 TGATATGCGTCATTGGCCTTTTAAGGTGATAAATG---TTGGTGGTAAACCATATATAGA 474624 ||| || |||||||||||| | || | || | || || || | Sbjct 636 TGACATCAAGTTGTGGCCTTTTAAGTTAATTCCGGGGCCTGCCGACAAGCCCATGATTGT 577 Query 474625 AGCAATACACGCAGGTGAAACTAAACAATTTTCACCGGAACAAATTTCTTCAATGGTTTT 474684 | | || ||| || || || || | | || | ||||| || ||||| || Sbjct 576 TGTTAATTACAAAGGCGAGGAGAAGCAGTTCGCTGCAGAGGAGATTTCATCCATGGTGTT 517 Query 474685 AGCCAAAATGAAACAAACCGC-GAGCTCATATCTTGG----ACAAGAAGTAACTGATGCA 474739 | || |||| | | || ||| | || ||||| |||| ||| |||| Sbjct 516 AATGAAGATGAGGGAGATTGCAGAG-GCTTACCTTGGTGTCACAA----TAAAGAATGCC 462 Query 474740 GTAATTACTGTTCCAGCATATTTTAATGATTCTCAACGTCAAGCAACTAAAGATGCGGGA 474799 || | |||||||| |||||||| ||||| || || | || || || || ||||| ||| Sbjct 461 GTTGTCACTGTTCCTGCATATTTCAATGACTCCCAGAGGCAGGCTACCAAGGATGCTGGA 402 Query 474800 AGAATTGCAGGTCTTAATGTTTTACGTATTATTAATGAACCAACAGCAGCCGCACTTGCT 474859 ||||| || | ||||| | | || || ||||| || || || || || |||| Sbjct 401 GTGATTGCTGGGTTGAATGTGATGAGAATAATCAATGAGCCTACTGCTGCTGCTATTGCC 342 Query 474860 TATGGTCTTGATAAGAATTCTGACA--------AAGAAGTAAATGTTTTAATCTTTGATT 474911 |||||| | || ||||| ||| || |||| |||||| || ||||| |||| Sbjct 341 TATGGTTTGGACAAGAAGGCTGGCAGTGTGGGTGAGAA--AAATGTATTGATCTTCGATT 284 Query 474912 GTGGAGGT 474919 || ||| Sbjct 283 TGGGTGGT 276 >seq32362 Length=298 Score = 96.9 bits (106), Expect = 2e-14 Identities = 155/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| | ||||| ||||||||| ||| || | |||||||| || ||||| Sbjct 227 ACGCAGACGCAAGACAAGGTGAAGTGTAGATTCCTTCTGGATGTTATAATCGGCCAGAGT 168 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || ||| || || || || |||||||| || || | || |||||||| ||||| || Sbjct 167 TCGCCCATCCTCCAGCTGTTTACCAGCAAATATGAGCCTCTGCTGATCAGGTGGAATCCC 108 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAA 480729 ||||||||| ||||| || ||| || ||||| ||||| | | | | || || | Sbjct 107 TTCCTTGTCCTGAATTTTCGCTTTTACGTTATCAATCGTATCGGAGCTCTCAA-CCTCCA 49 Query 480730 GGGTAATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 | || ||||| || || || | ||||| || || || || Sbjct 48 GTGTGATAGTCTTGCCTGTCAACGTCTTCACAAATATCTG 9 >seq25614 Length=477 Score = 95.1 bits (104), Expect = 8e-14 Identities = 152/216 (70%), Gaps = 2/216 (1%) Strand=Plus/Plus Query 480555 AGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTG 480614 ||||| || || | ||| || || ||| || || ||| |||||||| | || ||| Sbjct 53 AGACGAAGCACCAAATGCAGGGTCGATTCCTTTTGAATATTGTAATCAGCCAAGGTCCTG 112 Query 480615 TTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCC 480674 ||| || || ||||| ||||| || ||||| | || || ||||| |||||||||||| Sbjct 113 CCATCCTCCAGCTGCTTACCAGCGAAGATAAGCCTCTGCTGGTCAGGGGGAATTCCTTCC 172 Query 480675 TTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGT 480733 ||||| || ||||| ||||| ||||| || || | | | | || || ||| || Sbjct 173 TTGTCCTGGATCTTGGCCTTGACGTTGTCAATGGTGTCCGAGCTCTCAACTTCCAA-TGT 231 Query 480734 AATAGTTTTACCGGTGAGAGTCTTAACGAAAATTTG 480769 ||| || || || || || || || || || ||||| Sbjct 232 AATTGTCTTTCCAGTTAGTGTTTTTACAAAGATTTG 267 Score = 95.1 bits (104), Expect = 8e-14 Identities = 140/196 (71%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 480557 ACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGTTCTGTT 480616 |||||| ||||| || || ||| |||||| | || ||||| || || |||| | Sbjct 283 ACGGAGAACAAGGTGGAGGGTAGATTCTTTCTGGATGTTGTAATCGGCAAGGGTTCGGCC 342 Query 480617 ATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCCTTCCTT 480676 || ||||| |||||||| || || || ||||| || || || || || || |||||||| Sbjct 343 GTCCTCAAGCTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCGGGGGGGATCCCTTCCTT 402 Query 480677 GTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAGTG-TGTGAAGTTTCAAGGGTAA 480735 ||| || ||||| ||| ||| ||||| || |||| | | | | ||| || || | Sbjct 403 GTCCTGGATCTTAGCTTTAACATTGTCAATGGTGTCAGAGCTCTCGA-CTTCGAGAGTGA 461 Query 480736 TAGTTTTACCGGTGAG 480751 | || ||||||||||| Sbjct 462 TGGTCTTACCGGTGAG 477 >seq31848 Length=311 Score = 89.7 bits (98), Expect = 3e-12 Identities = 118/164 (72%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 480551 ACGAAGACGGAGTACAAGATGAAGTGTACTTTCTTTAGAAACATTATAATCAGCTAGAGT 480610 ||| ||||| | ||||| || || || ||| || | |||||||| || || || Sbjct 177 ACGCAGACGCAAGACAAGGTGGAGGGTTGATTCCTTCTGGATGTTATAATCGGCGAGTGT 118 Query 480611 TCTGTTATCTTCAAGTTGCTTTCCAGCAAAAATAAGACGTTGTTGATCAGGAGGAATTCC 480670 || | ||| || || ||||| || ||||| || || | || ||||| |||||||| || Sbjct 117 TCGGCCATCCTCCAGCTGCTTCCCGGCAAAGATGAGTCTCTGCTGATCTGGAGGAATACC 58 Query 480671 TTCCTTGTCTTGAATCTTTTGTTTGACAGCTTCAATAGTATCAG 480714 |||||||||||||||||| || || ||||| ||||||| Sbjct 57 TTCCTTGTCTTGAATCTTAGCCTTCACGTTATCAATCGTATCAG 14 >seq2529 Length=4890 Score = 86.0 bits (94), Expect = 4e-11 Identities = 188/276 (68%), Gaps = 7/276 (3%) Strand=Plus/Minus Query 520674 TGAACAATATTATCAACATACACAAAATCACGAGTAAATGATCCATCTCCATAAATAATA 520733 || || | ||| |||| ||| ||||||||| | ||| || |||| |||| | Sbjct 2198 TGCACTACATTTTCAATATAGGTAAAATCACGGGAAAAATCACCGGTGCCATTTATAACA 2139 Query 520734 GGAGATTCATTATTTAATA-TCGTGTTGATAAACTTGGGTATAACGGCAGCATATACTCC 520792 ||| ||||| ||| | | | || || | |||| || ||||| || ||||| |||| Sbjct 2138 GGACTTTCATAATTCATGAATTGT-TTCACAAACAATGGAATAACAGCCGCATAGGCTCC 2080 Query 520793 ATTTGGATTTTGTTTTGGTCCAAAAACATTAAAATATCTTAATCCAATACATTCTAAACC 520852 |||||| | || |||||||||| || ||||| || || |||||| || | || Sbjct 2079 ATTTGGGTCCTGGCGACGTCCAAAAACGTTGAAATACCTCAAACCAATAGTCTCAAGGCC 2020 Query 520853 GTATAAAT--CAGTAAATAATTTTGCATATAATTCATTAATATATTTAGTTGTTGCATAT 520910 || | | | ||||| | |||||||||||||| | ||| ||||| ||||||| Sbjct 2019 ATAGGTTTTGCTGAAAATA--TCAGCATATAATTCATTGACATACTTAGTAATTGCATAG 1962 Query 520911 GTTGATAATGAATCTCCTATATT-TATTTCATTTTT 520945 | ||||||| | |||||| || | || || |||| Sbjct 1961 GGAGATAATGGCTTTCCTATTTTGTCTTCCACTTTT 1926 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3266654759854772