Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_020482.1 Length=39921 Score E Sequences producing significant alignments: (Bits) Value seq815 86.0 2e-12 >seq815 Length=11039 Score = 86.0 bits (94), Expect = 2e-12 Identities = 59/67 (88%), Gaps = 0/67 (0%) Strand=Plus/Plus Query 5599 TGGTGGAATTGGTAGACACGCCAGTCTTAGGAACTGGTGTCGCAAGACGTGTAGGTTCAA 5658 ||||| |||||||||||||||||| ||||||| |||||| |||||| |||||||||| | Sbjct 1492 TGGTGAAATTGGTAGACACGCCAGACTTAGGATCTGGTGCCGCAAGGTGTGTAGGTTCGA 1551 Query 5659 ATCCTAT 5665 |||||| Sbjct 1552 GTCCTAT 1558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 127571738726394