Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_020853.1 Length=56958 Score E Sequences producing significant alignments: (Bits) Value seq2903 109 2e-19 >seq2903 Length=4332 Score = 109 bits (120), Expect = 2e-19 Identities = 113/148 (76%), Gaps = 0/148 (0%) Strand=Plus/Plus Query 51584 CCGTAGGGTGGCAGGGGTTGTTCGCCGCAGGGGTTTGTGGCCGCGATGACCTCGCAATAG 51643 ||||||| |||||||| || ||||||||||| || ||||| |||||| ||||||| ||| Sbjct 224 CCGTAGGACGGCAGGGGCTGCTCGCCGCAGGGATTGGTGGCGGCGATGTCCTCGCAGTAG 283 Query 51644 TTCAGGTTGTTCCGGTTATTGATCCGGTCGATGAACAGGACACCCGGCTCAGCAACATCA 51703 ||||||||| | ||||| ||||| | ||| |||| |||||||| || | || Sbjct 284 CGCAGGTTGTTGTCCTCGTTGATGCGGTCCAGGAAGAGGATGCCCGGCTCGGCGAAGTCG 343 Query 51704 TAGGTGTGCTTCATCATGGCGTCCCACA 51731 |||| | |||||| || |||||||| Sbjct 344 TAGGCCGACGTCATCACGGTGTCCCACA 371 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 182067130564560