Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_021072.1 Length=178807 Score E Sequences producing significant alignments: (Bits) Value seq35445 86.0 7e-12 seq14778 86.0 7e-12 >seq35445 Length=682 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880 ||||||||| | || |||||| | ||||| ||||||||||| ||||| |||||| ||| | Sbjct 431 TGGAGAATAAGGGAGTCGAACCCTTGACCTCCTGCGTGCAAGGCAGGCGCTCTAGCCAGC 372 Query 35881 TGAGCTAATTCCCC 35894 |||||||||||||| Sbjct 371 TGAGCTAATTCCCC 358 >seq14778 Length=957 Score = 86.0 bits (94), Expect = 7e-12 Identities = 64/74 (86%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 35822 TGGAGAATAGGAGACTCGAACTCCTGACCCCCTGCGTGCAAAGCAGGTGCTCTA-CCAAC 35880 ||||||||| || |||||| ||||||||||||||||| |||||||||||| ||| | Sbjct 74 TGGAGAATAACGGATTCGAACCGTTGACCCCCTGCGTGCAAGGCAGGTGCTCTAGCCAGC 15 Query 35881 TGAGCTAATTCCCC 35894 |||||||||||||| Sbjct 14 TGAGCTAATTCCCC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571800271983480