Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_021307.1 Length=49894 Score E Sequences producing significant alignments: (Bits) Value seq15871 80.6 8e-11 >seq15871 Length=886 Score = 80.6 bits (88), Expect = 8e-11 Identities = 56/64 (88%), Gaps = 0/64 (0%) Strand=Plus/Plus Query 1680 ATAGGCATGTAGCTCAATTGGTAGAGCAGCGGTCTCCAAAGCCGCCGGTTGCAGGTTCGA 1739 ||| || ||||||||||||| |||||||||||||||||| |||| ||||| ||||||| Sbjct 621 ATACGCCAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGA 680 Query 1740 GTCC 1743 |||| Sbjct 681 GTCC 684 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 159471870369408