Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_021343.1 Length=35430 Score E Sequences producing significant alignments: (Bits) Value seq8333 241 3e-59 seq1131 223 8e-54 seq8149 131 4e-26 seq19373 111 4e-20 seq1720 91.5 3e-14 seq16944 82.4 2e-11 >seq8333 Length=1724 Score = 241 bits (266), Expect = 3e-59 Identities = 822/1272 (65%), Gaps = 47/1272 (4%) Strand=Plus/Minus Query 25624 CGTTCCCGCTGAACAAGCCGGTGCTGCTCACGAACGTGCAGGCCG-CGC--TCGGCAAGG 25680 |||||||||||||| ||||||||||| || ||| | ||||| ||| ||||||||| Sbjct 1671 CGTTCCCGCTGAACGTACCGGTGCTGCTGACCAAC---CCGGCCGGCGCCATCGGCAAGG 1615 Query 25681 CGGGCCGAAAGGGCACGCTGTACACGACGCTCGATGCGATCCAGAAACAGGCCCGCCCGT 25740 | ||| |||||||| | |||| || || ||| || || |||||| | Sbjct 1614 CCGGCGCGGGCGGCACGCTCGCCGGCGCGCTGGACGCCATCAGCAAGCAAGCCCGCGCCA 1555 Query 25741 ACACCGTCGTGGTGCGCGTCCCGCAAGGCAAGGATTCGGCGGAAACCACGTCGAACATTG 25800 ||| || ||||||||||| | |||||| | ||||||||| | | ||| | Sbjct 1554 TCACGGTGGTGGTGCGCGTGGCCGAAGGCACCACCGCCGCGGAAACCGCAACCAACGTCA 1495 Query 25801 TCGGCACCGTGAATGCCGACGGCACGAAAACCGGGCTCAAGGCGCTCGAATCGGCGCCGT 25860 |||||||| | | | |||| | ||||| || |||| || | | || Sbjct 1494 TCGGCACCACCACCGAGGCCGGCCAGCGCACCGGCCTGCAGGCCCT------GCTGGCGG 1441 Query 25861 CCGTGGTGCAG------GTGAAGCCGCGGATTCTGGCGGTTCCGGGGCTCGATACGCAGC 25914 ||| || ||| ||||||||||| || | | | || || || || || || Sbjct 1440 CCGAGGGGCAATTGGGCGTGAAGCCGCGCATCATCGGCGCGCCCGGCCTGGACACCAAGG 1381 Query 25915 CCGTCGCGAACGCGCTGGCATCCACCGGGCAACTGCTGCGTGCGATGGCGTACGTCGCGG 25974 |||| || || |||| ||| | ||| | ||| || || | | ||||| ||| Sbjct 1380 CCGTGGCCGTGGCCATGGCGTCCGTGGCGCAGCAGCTCCGCGCCTTCACCTACGTTTCGG 1321 Query 25975 CTCGCAACGAGACGGGGGAACTGGTCGCCACGCAGGAAGAGGCGGTGGCCTACCGGAAGA 26034 | ||| || | | | | |||||| |||||| || ||| |||||| Sbjct 1320 CCCGCGGCGCCAACGATGCCTATGCCGCCACCAAGGAAGCCGCCGTGCTCTACCGCGGCG 1261 Query 26035 AGTTCGGTCAACGCGAAGTGATGGTGATCTGGCCGGATTTCGTCGCATGGGACGACGCCG 26094 ||||||| || ||||| ||||||||||| ||||| | ||| | || ||||||| || | Sbjct 1260 AGTTCGGGCAGCGCGAGGTGATGGTGATGTGGCCCAACTTCCTGGCCTGGGACGGCGAGG 1201 Query 26095 CGTCGAAAGAGGTTGAAGTGCCCGCCGTAGCGTATGCGGTCGGCCTGCGCGCGAAGATCG 26154 || | | || || ||||||||||| || ||||| | ||||||||||| ||| | | Sbjct 1200 CGGGCGAGGCCGTGGAGGTGCCCGCCGTCGCCTATGCCCTGGGCCTGCGCGCCAAGCTGG 1141 Query 26155 ATCAACAAACCGGCTGGCATAAGACGCTCTCGAACGTCGCTGTGAATGGCGTCGAAGGGA 26214 |||| | | |||||||| ||| | | || ||| | | || || ||||| ||||| | Sbjct 1140 ATCAGGAGATTGGCTGGCACAAGTCCATTTCCAACATGGTGGTCAACGGCGTGGAAGGCA 1081 Query 26215 TCA-GCAAGCCGGTTTCGTGGGATTTGCAGAACCCGGCGACCGATGCGGGTTTCCTCAAC 26273 ||| || | | ||| | || |||||| |||||| | ||||||||| | ||| ||| Sbjct 1080 TCACGCGCGATGTGTTC-TTCGACCTGCAGAGCCCGGCCAGCGATGCGGGCTACCTGAAC 1022 Query 26274 GAGAATCAGGTCACGACGCTGATCAACCGGAACGGCTTCCGATTCTGGGGCTCGCGCAC- 26332 || | ||||| |||||||| || |||| | ||| |||||||| |||||||| Sbjct 1021 AGCAAGGAAGTCACCACGCTGATTCGGCGCGACGGATACCGCTTCTGGGGTTCGCGCACC 962 Query 26333 --GGCGTCCGACGATCCGCTGTTCGCGTTCGAAAACTACACGCGCACGGCGCAGGTGCTG 26390 | | ||| || |||||| || || |||||| ||||| || ||||||||| Sbjct 961 TGCGAGGCCGCCGGCGGAAAGTTCGCCTTTGAGCCCTACACCCGCACCGCCCAGGTGCTG 902 Query 26391 GCCGATACGATGGCCGAAGCACAGATGGTCGTTATCGACGGCGCGATGATTCCGGCGCTA 26450 ||||| || || || ||||| || | ||| | |||||| | ||| || |||| Sbjct 901 GCCGACACCATCGCAGAAGCGCACTTCGTCTTCATCGACAAGCCCATGCACCCCTCGCTG 842 Query 26451 CCGCGCGACGTGATCGAGGGCATCAACGCAAAAATGCGTGAAATGAAAACCAAGGGCCAG 26510 ||||||| || | | ||||||| | || || || | ||| | Sbjct 841 GTGCGCGACATGCTGGGCTACATCAACAGCCGCTTCCGCGATCTGGTCAATGGCGGCTAT 782 Query 26511 TTGATCGGCGGCTCGGCGTGGTTCGACGCGGAACAGAACGGCGTTGTGGCGCTGAAAGAT 26570 | ||||| | | |||| |||||| | || | ||||||| | | ||| | Sbjct 781 CTCATCGGGGCCAATGCGTACTTCGACCCCGATCTGAACGGCAAGGAAGACCTGGCCGTC 722 Query 26571 GGCAAAGCGGTGATCAATTACGACTACACGCCGGTGCCCCCGCTGGAAAACCTCACGCTG 26630 ||| | ||||| |||||||||||||||||||| |||||||| ||||| | | Sbjct 721 GGCCGCCTGCAGATCAGCTACGACTACACGCCGGTGCCGCCGCTGGAGAACCTGGTGTTC 662 Query 26631 CGCCAGAAGATCACCGACCAGTATCTGGCCGATTTCGCGTCGCAGGTCAACGC--GTAAC 26688 ||| ||||||||| || |||||||| || | | || | || ||| | | Sbjct 661 AACCAATCCATCACCGACACCTACCTGGCCGAGTTTG---CCCAAGCCATCGCCGCGAGC 605 Query 26689 GCACCCGCCTGGACAAGTCGTCCGGGCCA-GACATAGGGAAGGGAGGATAGAAAAATGGG 26747 || |||| | || | || || ||| | | || ||| | | ||||| Sbjct 604 TGACACGCCCGCGCACCGCAGCCACCTCATCACACACGTAAAGGA--ACAACGCCATGGG 547 Query 26748 AATGCCGTCCAAACTGAAGCACTTCAACGTGTTTCTCAACGGCGTGTCGTATATCGGGCA 26807 ||||| |||||| ||| |||||||| |||| | ||||| ||||| || | Sbjct 546 CATGCCCAGCAAACTCAAGAACTTCAACCTGTTCGGCGACGGC------AATATCTGGAA 493 Query 26808 GACGGCGGAACTG--------ACGTTGCCGAAGCTCACGCGCAAGATGGAAGAATGGCGC 26859 | |||| | || || |||| || ||||| |||||| |||| ||||||||| Sbjct 492 G--GGCGAGATTGATTCTGTCACCCTGCCCAAACTCACCCGCAAGGTGGAGGAATGGCGC 435 Query 26860 GGCGGCGGCATG 26871 |||||||||||| Sbjct 434 GGCGGCGGCATG 423 >seq1131 Length=8710 Score = 223 bits (246), Expect = 8e-54 Identities = 605/915 (66%), Gaps = 56/915 (6%) Strand=Plus/Plus Query 13318 GTGCAACAAACGCTCGAAAAGCGCATTCAAGAATCGGCGGCGTTCCTGCAAAGCATCAAC 13377 ||||| |||| |||||||| ||||| || |||||| | ||||||||| ||||||| Sbjct 6877 GTGCAGCAAAAGCTCGAAAGCCGCATGCAGGAATCGTCCGCGTTCCTGGCCTCCATCAAC 6936 Query 13378 GTGCAGGGCGTGACCGAACAGATGGGCGAAAAGCTCGGCCTGCTCATCGGCGCACCGATC 13437 | |||||| || ||| ||||| ||| | ||| || | || || || || Sbjct 6937 ATCATCGGCGTGGATGACCAGGCCGGCGACAAGGTGGGCGTGGGCGTCACCGGCCCCATT 6996 Query 13438 GCGAGCACGACGGACACCACGAAGGG---GGACCGGATCACG------GTCGATCTGACC 13488 || ||| || |||| | || || ||| | || ||||| |||| Sbjct 6997 GCCAGCCGCACCAACACAGCCGCCGGCAAGGTCCGCAAGCCGCGCAACGTCGAATCGACC 7056 Query 13489 GACATGGACCCGAACGCTTACGTCTGCGCGCAGACGAATTACGACACGCATTTGAAGTAC 13548 || | |||| ||| ||| ||||| |||||| || | ||||||||| || | ||| Sbjct 7057 GAAA-----CCGACGGCT-ACGCCTGCGTGCAGACCAACTTCGACACGCAGTTCACCTAC 7110 Query 13549 AGCAAGCTCGATGCGTGGGCGCAGTTCCCGAATTTCCAGACGATGGTGCGCGACGTGAAC 13608 || |||||| || |||||||| ||| | ||||||||| | ||||||| || | Sbjct 7111 CGCCTGCTCGACGCCTGGGCGCACCGCCCCGACTTCCAGACGCGCATCCGCGACGCGATC 7170 Query 13609 GCGACGCAACAAGCGCTCGATCGGATTCGAATCGGCTTCAATGGTGT-------GGGCCG 13661 | || || |||||||| || || ||||||||||| || || | ||| Sbjct 7171 ATCAAGCGCCAGGCGCTCGACCGCATGACCATCGGCTTCAACGGCGTCTCCATCGAGCCC 7230 Query 13662 GGCTGCAACGTCCGATCGCACGAAGAACCCGAACCTCGAAGATGTGAACAAGGGCTGGCT 13721 | | |||| || ||| | |||| || |||| ||||||||||||||||| Sbjct 7231 GACACCAACCTCGC--CGCCC-----ACCCCCTGCTGCAAGACGTGAACAAGGGCTGGCT 7283 Query 13722 GCAGAAGTACCGCGATCAGGCGGGCGATCGGGTGATCAGCGAAGGGAAGAAGGGTTCGGG 13781 ||||||||||||||| |||| | || || || || || | | | | | Sbjct 7284 GCAGAAGTACCGCGACAAGGCCGCCGCCCGCGTCATGGGCTCCG------ACG---CCGC 7334 Query 13782 CAAGCTC---GTGATCGGCGGCGCCGATGGCGATTACAAGAACCTCGACGCGCTCGTGTA 13838 |||| || ||| | ||| |||| | ||| |||||||||||||||||||||||||| Sbjct 7335 CAAGATCAAGGTGGGCAGCGACGCCAGCGCCGAGTACAAGAACCTCGACGCGCTCGTGTA 7394 Query 13839 CGAGGCGACGAATTC-GCTGATCGAGCCGTGGTATG-CGGAAAGCCCGGAACTGGTCGTG 13896 ||| | |||| |||| |||| |||||||| ||| | |||| | || |||| Sbjct 7395 CGACA----GCATTCAGCTGCTCGACCCGTGGTACCACGGCGACCCCG-ACCTCGTCGCC 7449 Query 13897 CTGTGCGGCCGCGATACGCTCCTG---GACAAGTATTTCCCGATCCTCGATCGCGA-CAA 13952 | |||||||| |||| || ||||||| |||||| | || | | || || Sbjct 7450 ATCCTCGGCCGCGG---GCTCATGCATGACAAGTTCTTCCCGCTGGTCAACCAAGAGCAG 7506 Query 13953 CCCGCCGACGGAATCGCTCGCGGCCAGTATGGTCATCAGCCAGAAGCGCATCGGCAATCT 14012 |||||| || ||| ||||||| || | |||||||| || |||||| | ||| || Sbjct 7507 CCCGCC-ACCGAAACGCTCGCCACCGATCTGGTCATCTCGCAAAAGCGCGTAGGCGGCCT 7565 Query 14013 GCAAGCCATGCGGGTGCCGTTCATGCCGCGCGGCAAGCTGTTCATCACCATCCCGAAAAA 14072 || ||| | ||||| ||| | || |||||| || || |||||| | | || Sbjct 7566 GCGCGCCGTCACCGTGCCCTTCTTCCCCGAAGGCAAGGTGCTCGTCACCACGCTGTCCAA 7625 Query 14073 CCTGTCGATCTACTGGCAAATCGGCGGCCGTCGGCGCGCGGTGATCGACAACCCGAAGCG 14132 |||||| ||||||||||| |||| || || || ||| |||| ||| || || Sbjct 7626 CCTGTCCATCTACTGGCAGATCGCCGCGCGCCGCCGCCACGTGAAGGACGCGCCCGAGGT 7685 Query 14133 CGATCAGGTCGAGTTCTTCGAATCGAGCAACGAGGCGTATGTGGTCGAGGACTTCGGCGC 14192 |||| ||| || |||||| ||| |||||| | || |||||||| |||| |||| Sbjct 7686 CGATGCGGTGCAGAACTTCGAGTCGTCCAACGACGACTACGTGGTCGAAGACTACGGCCG 7745 Query 14193 CGGTTGCCTGATCGA 14207 ||| ||| ||||| Sbjct 7746 CGGCGCCCTCATCGA 7760 Score = 210 bits (232), Expect = 5e-50 Identities = 803/1238 (65%), Gaps = 37/1238 (3%) Strand=Plus/Plus Query 10380 TTCGTTATCGAGCGCGTGAAGGCAGGCCCATGCGAGGTCAGCGTGGCCGATTTCTTCGTT 10439 |||||| |||| || || | ||| ||||| || || || ||||||||| || ||| | Sbjct 3882 TTCGTTGTCGAAGGCATGCATGCACGCCCAGGCCAGATCCGCGTGGCCGGCCTCATCGCT 3941 Query 10440 ACGCGCGGCGGTGTAGGTCATCTTCGTGCCGCTCGG----CGTCATGGCTCGGCGGATGG 10495 || | ||||||||||| ||| ||||||| || ||||| | |||||||| Sbjct 3942 GCGGCCCGCGGTGTAGGTGATC----TGCCGCTGGGATGCCGTCAGCACCTTGCGGATGG 3997 Query 10496 ACAGGAACGATTGCGCGAGGTCGGTCATACCTGC-GTCGAATTCCAGGCGCTTTTTCCCG 10554 || |||| || | || || ||| || ||| | || | ||| || ||| Sbjct 3998 CCATAAACGCCGCTGCCACATCCGT-GCACCCGCTGTCCATCTCAAAGCGGCCCTTGCCG 4056 Query 10555 ATCACCGACATGCCTTTCAGGACAAGGCGGTTTTTCACTTCGGGCGAGTAATTGATCGGT 10614 |||||| | || | ||||| || |||||| | ||||| || || | || | || Sbjct 4057 ATCACCTGCTTGGCCTTCAGCACCAGGCGGCTCTTCACCTC-CACGCTGTACTGGTAGGC 4115 Query 10615 ACGACGC--GCGGGAAGAACTGGCGCACAAGCTGATGCACGCCGTGACCGATGCCGGTCG 10672 || ||| |||| ||||||| | || ||||| ||||| || || | ||| | | Sbjct 4116 CCG-CGCCTGCGGAAAGAACTTGATGACGTTCTGATAGACGCCCTGCCCCAGCCCGCTGG 4174 Query 10673 TATCGATCGCGATATAGGTCACGTGGTAGCGCTGCGTCAATTCGCGGATTTTCTCCGCCT 10732 | ||||| |||| |||||||||| | | |||||| | ||||||| ||| |||| Sbjct 4175 TGTCGATGCCGATGTAGGTCACGTTGAACTTCTGCGTGATCGCGCGGATGGCCTCTGCCT 4234 Query 10733 GCGTTTCGAAGTCGATGCCCTTCCAACGATGCCGTTCGAGCACACGGAATTTTCCGTTCG 10792 || |||||||| ||||| | | ||||| | |||| ||||| || ||| || Sbjct 4235 GCTGCTCGAAGTCCGCCCCCTTGAACTGCTGCCGGTGCAGCAGCCGGAACTTGCCGCCCG 4294 Query 10793 GCTGCTCG-GGCGGGGCGATCACGACGCACCCGGCCGAGTCGCCAGTAAGGGCAGGGTCG 10851 || || || ||||| || ||||| || | | || | ||||| || | | |||||| Sbjct 4295 GC-GCCCGCGGCGGTGCAATCACCACCAGCGCCGCAGCATCGCCGGTGTGCGATGGGTCG 4353 Query 10852 TAGCCGATCCATACCGGCTTCCAGCCGAACGGCCGATCGAGCAACGGCTTCACGTCCGTC 10911 || || | ||| ||||| || ||||||| | |||||||| |||| | Sbjct 4354 TACCCCACCCACACCGGAAAGTGCGCGTACGGCCGCGTGGCAAACGGCTTGCAATCCGCC 4413 Query 10912 CACACGTCCCATGAATCGACCATGCACGCCTGTACGAGCCGGAAGGCGAACACCGATGAG 10971 ||| | ||||| || |||||||| |||| | | || | ||||| | | Sbjct 4414 CACGCCTCCCAGCTGTCCACCATGCAGCCCTGCATTTCCTTGAGCGTGAACAGGCTAGCG 4473 Query 10972 GTGTCGTCCACGAACTGGCACATGTACAGGTTTTCGAAATCGGCGGGGCTGTTCGTTGAG 11031 ||||||| | ||||| ||||||||||||||| |||| || | |||||| | | Sbjct 4474 CTGTCGTCGATGAACTCGCACATGTACAGGTTGGCGAACTCTTCCGGGCTGCTTTCTTCC 4533 Query 11032 CGCAAGTCCTCCAGATC---CAGTTTCGTGAATCCGGATGCGATG--GCATCCTCGGCCG 11086 |||| || || | || ||| | || | || | ||| || || |||||| || Sbjct 4534 CGCAGCTCGTCGATGTCGAACAGGT---TGCAGCC-CAGGCG-TGCCGCGTCCTCGATCG 4588 Query 11087 TGACGATCTGCCGCCA-TTGCCCGTCGCCGCACTGGCGCCCGCGTGCAAGCGACGTATGG 11145 | || | | ||||| |||| ||| | | | ||| || || |||| | ||| Sbjct 4589 TCACCACGTCGCGCCACTTGCGATCGGCCCCGCGGATGCCGCCGCGC-AGCGCTGCGTGG 4647 Query 11146 GAAATGTCGATCTCGACGCGCTCGTCGTCGGGACGGTCGCGGTTGAAGTCCGCGCCAGTC 11205 | |||||| || | |||| | | | ||| | |||| |||| ||| || Sbjct 4648 CTCACGTCGATGGTGATGGCCTCGCCCTTGCTGCGGCCTTTGTTGCGCTCCGTGCCGTTC 4707 Query 11206 CAAAACGCATAGGCTTCGTGCGTCGTTGTGGATGGCGTAGAGAAGTGCGTCATCCGCAAA 11265 || |||| ||| || || |||| | | | || || || ||||||| |||| | ||| || Sbjct 4708 CAGAACGGATACGCCTCATGCGACATGGCCGACGGGGTGGAGAAGTACGTCTTGCGCCAA 4767 Query 11266 TGCGAATGCGTCGCCATCCCCTTCGCTACCTTGTTCAGTTCGGCAAACTTGCTGACCCAG 11325 ||| ||||||||||| || || |||||||| || | | ||| ||||| Sbjct 4768 TGCTTGTGCGTCGCCATGGCCGCGGCCACCTTGTTGAGCTGGCGAAAGCCCGACACCCAA 4827 Query 11326 AAATACTCATCGAAATACAGGTCGCCGTTGTAGCTTTGGGCCGTGCGTGAACTGGTGCCG 11385 || |||||||||| || | ||||||| || | || ||||| | | ||||||| Sbjct 4828 AAGAACTCATCGAAGTAGAAGTCGCCGCTGCGCCCCTGCGCCGTCTTCGCATTGGTGCCC 4887 Query 11386 AGAAAAATCAATTCCGCACCGTTCGACAACCGCATCGGATCGCCGGTTAGCTCAACCTGC 11445 | ||| || |||||||||||||||| | || || |||||| | ||||| || || Sbjct 4888 AAAAAGTGCAGCTCCGCACCGTTCGACAGCACGATAGGGTCGCCGCTCAGCTCCAC--GC 4945 Query 11446 GCAGCGTTCCACGCAAATTTCTGGATATACGAGCGGAACACGTGTGCCTGTGCGCGGCTC 11505 || | || ||||| | | || |||| |||| ||| ||||| || Sbjct 4946 CCA-CCAGCCCGGCAAAGGCCAGCATGTACGTCTTGAACTGGTGCGCCTGCGCCTTTGAT 5004 Query 11506 GCCGACAGAAAAATCTGATTCGTGCCGGTTTCC---AGCGCGCGCACGAGTGCCTCGTGC 11562 || || || ||||||||||| | ||| ||| | ||||| | || |||||| | Sbjct 5005 GCAGAAAGGAAAATCTGATT-GCGCC--CCTCCGTGATGGCGCGTATCAGCGCCTCGCGG 5061 Query 11563 GCGAAATAGAACGTGGCGCCGATCTGTCGTGACTTCAG 11600 || || || | ||||| |||||||| || |||||||| Sbjct 5062 GCAAAGTACCAAGTGGCCCCGATCTGCCGCGACTTCAG 5099 Score = 147 bits (162), Expect = 5e-31 Identities = 279/410 (68%), Gaps = 27/410 (7%) Strand=Plus/Plus Query 9423 GCCGAACCCGCCCGTGTTGCTCGGGACGATGCCAAGCAACTGCGGCGGAACGCGATGGGC 9482 |||||| || ||||||||| | |||| |||||| |||| ||||| ||||| ||||| Sbjct 2920 GCCGAAGCCTCCCGTGTTGTTGGGGATGATGCCCAGCAGGCCGGGCGGCACGCGGTGGGC 2979 Query 9483 CGCGAGCGTGTCGTC---GCGCGTCACGTTCTTGATGTCGAAAAACTGGTCTTTCGCTGC 9539 || ||| |||| | || || |||||||||| || || | |||||| || || Sbjct 2980 GGCCAGCACGTCGGCCATGCTGGT---GTTCTTGATGGCGGCGAAGTCGTCTTTGGCGGC 3036 Query 9540 AACCTCCGAAATCGGGATCAGTTGGA--CCG--CGCCTTTTTTCGCCGCCGCTGTTTCGC 9595 | ||| || |||||||| | | ||| |||||| ||||| Sbjct 3037 GATCTCGCTGATGGGGATCAGCTTCAAGCCGTCCGCCTT--------GCCGC-------- 3080 Query 9596 GCGGCCGAGTGCAGAAACAGGTTCCGGAAATTACCGATGCCCTTCGAGTCGCGTAACGCC 9655 | | || |||||| |||||||| ||||| || || ||||| || | ||| | | | Sbjct 3081 -CAGGCGCGTGCAGGAACAGGTTGCGGAAGTTGCCCGGCCCCTTGGACTTGCGCAGCTGC 3139 Query 9656 TTCCGGATCGCGTCTACGTCGTCCGGGTCCATGTTCGGGTCGTTGAGGTACAGGATGAAC 9715 | || | || ||| |||||| | | || | | |||| | ||||||| |||||| Sbjct 3140 TCGCGCAGCGTGTCCACGTCGGTGGTGCTCACCGTGGCGTCGCTCAGGTACATGATGAAG 3199 Query 9716 CCGGCGTGCGAGCCGTTCGCGTAGTAGCGGCGCCGGAACAGGGTGGCGGACTCGTTCAAC 9775 ||||| || ||||||| ||||||| ||||| || |||| |||||||| |||||||| Sbjct 3200 CCGGCATGGCTGCCGTTCTCGTAGTACCGGCGGCGAAACATGGTGGCGGCCTCGTTCAGG 3259 Query 9776 CACGCGGATTGCAACGATGCGATGTACTCGGGCATCCCGTACACCTCCTG 9825 || || ||||||| | |||||| |||| || ||||||||||| Sbjct 3260 TGGGCCGACTGCAACGCGCTCAGGTACTCCGGCACGCCATACACCTCCTG 3309 >seq8149 Length=1767 Score = 131 bits (144), Expect = 4e-26 Identities = 739/1155 (64%), Gaps = 64/1155 (6%) Strand=Plus/Minus Query 26119 CCGTAGCGTATGCGGTCGGCCTGCGCGCGAAGATCGATCAACAAACCGGCTGGCATAAGA 26178 |||| || || || | |||||||||||| ||||| || | |||||||| |||| Sbjct 1636 CCGTGGCCTACGCCCTGGGCCTGCGCGCGCGCATCGACCAGGAGCAGGGCTGGCACAAGA 1577 Query 26179 CGCTCTCGAACGTCGCTGTGAATGGCGTCGAAGGGATCAGCAAGCCGGTTTCGT-GGGAT 26237 |||| || ||||| | || ||||| || ||| | || | | | |||| Sbjct 1576 CGCTGTCCAACGTGCCGTTGTCGGGCGTTCTGGGCATCT-CGCGCGATGTGCATTGGGAC 1518 Query 26238 TTGCAGAACCCGGCGACCGATGCGGGTTTCCTCAACGAGAATCAGG--TCACGACGCTGA 26295 |||| | ||| | ||||| || || |||||||| || | || |||| ||||||| Sbjct 1517 CTGCAAAGCCCCGATACCGAGGCCGGCATCCTCAACCAGG--CCGGCATCACCACGCTGA 1460 Query 26296 TCAACCGGAACGGCTTCCGATTCTGGGGCTCGCGCACGGCGTCCGACGATCCGCTGTTCG 26355 || | | | ||| ||| ||||||||||||||||| | ||| ||||||| Sbjct 1459 TCCAGAGCCAGGGCCACCGCTTCTGGGGCTCGCGCACCTGCACGGACAGCGAGCTGTTCC 1400 Query 26356 CGTTCGAAAACTACACGCGCACGGCGCAGGTGCTGGCCGATACGATGGCCGAAGCACAGA 26415 ||||| | | |||||| ||||||||||||||||| || |||||||| || || Sbjct 1399 GCTTCGAGTCCAGCGTGCGCACCGCGCAGGTGCTGGCCGACACCATGGCCGAGGCGCATT 1340 Query 26416 T---GGTCGTTATCGACGGCGCGATG-ATTCCGGCGCTACCGCGCGACGTGATCGAGGGC 26471 | || ||| | | || | ||| | || || | | ||| | | || ||| Sbjct 1339 TCTGGGCCGTGGACAA--GCCC-ATGCACCCCAGCCTGGTCAAG-GACATCCTGGAAGGC 1284 Query 26472 ATCAACGCAAAAATGCGTGAAATGAAAACCAAGGGCCAGTTGATCGGCGGCTCGGCGTGG 26531 |||||| | || | || ||| |||| || |||| | | | | |||| ||| ||| Sbjct 1283 ATCAACACCAAGTTCCGCGAACTGAAGGCCCTGGGCTACATCCTGGACGGCAAGGCCTGG 1224 Query 26532 TTCGACG---CGG--AAC-AGAACGGCGTTGTGGCGCTGAAAGATGGCAAAGCGGTGATC 26585 | ||||| ||| ||| ||| || | |||| || | ||||| |||| | Sbjct 1223 TACGACGAAACGGTCAACGAGACCGCCA------CGCTCAAGGCCGGCAAGCTGGTGCTG 1170 Query 26586 AATTACGACTACACGCCGGTGCCCCCGCTGGAAAACCTCACGCTGCGCCAGAAGATCACC 26645 | |||||||||||||| ||||| |||||||| |||| | |||||| |||||| Sbjct 1169 GACTACGACTACACGCCCGTGCCTCCGCTGGAGGACCTGGGTTTTCGCCAGCGCATCACC 1110 Query 26646 GACCAGTATCTGGCCGATTTCGCGTCGCAGGT---CAACGC---GTAA--------CGCA 26691 || | || | ||||| ||||| || || || || |||| |||| Sbjct 1109 GATCGCTACTTCGCCGACTTCGCCCTGCGCGTGGGCACCGGCCAGTAAACGGCGGCCGCA 1050 Query 26692 CCCGCCTGGACAAGTCGTCCGGGCCAGACATAGGGAAG---GGAGGATAGAAAAATGGGA 26748 |||| | | | | ||| | ||| || | |||| | || | |||||| Sbjct 1049 CCCGACACACCCAATACACCGAAC---ACACCGGATACACAGGAGAAAAGCACCATGGGA 993 Query 26749 ATGCCGTCCAAACTGAAGCACTTCAACGTGTTTCTCAACGGCGTGTCGTATATCGGGCAG 26808 |||| | || ||| | ||| | || | | ||| || || ||||| | Sbjct 992 CTGCCCCGCTCTCTCAAGAATTTCGCCACCTTCGTGGATGGCAACTCATACATCGGCGAC 933 Query 26809 ACGGCGGAACTGACGTTGCCGAAGCTCACGCGCAAGATGGAAGAATGGCGCGGCGGCGGC 26868 | | | ||| || ||||| |||||||| ||||||||||| | | |||| ||||||| Sbjct 932 ATGCCCGAAGTGGGCTTGCCCAAGCTCACCCGCAAGATGGAGAAGTACCGCGCCGGCGGC 873 Query 26869 ATGGT-GGCGCCGGTGAAATACGATTTCGGGCCGGAGGCGATGGAACTGGAG-TGGTCGC 26926 ||| |||| ||| | || ||||| |||||| || || || || ||| Sbjct 872 ATGAACGGCGA-GGTCAGCCTGGACTTCGGCATGGAGGCCATCGAGGCCGACCTGACCGC 814 Query 26927 TCGGCGGGATCGACAAGAACATGCTGAAC--CAG-TGGGGCACCCCGTCCGTCGATGGCG 26983 | || || | ||| ||| | ||| | || |||||||| | | | ||| |||| Sbjct 813 T--GCCGGCT--ACATGAAGGAGTTGATCTCCACCTGGGGCACGCTGCGCCACGACGGCG 758 Query 26984 TGATGCTGCGCTTCGCTGGTGCT-TACAAGA--ACGACAGCGACGACGAGTGGAC-CGCA 27039 || ||||||||||||| || || | || | | |||||||| | || ||||| ||| Sbjct 757 TGCTGCTGCGCTTCGCCGGCGCCCTGCAGGGCGATGACAGCGAAGGCG--TGGACTCGCT 700 Query 27040 GTCGAAATCGTCGTGCGCGGCCGTTACTCCGAAGTGGATTTCGGCAATGCGAAAGCGGGC 27099 | ||| | ||| |||| ||||| | ||| || | || |||||| || || || ||| Sbjct 699 G--GAAGTGGTCATGCGTGGCCGCTTCTCGGAGTTCGACCCCGGCAAGGCCAAGGCCGGC 642 Query 27100 GACGACACCACGACCAAGGCAACGATGACGCTGGCCTACTACAAGCTGTCCATCAACGGC 27159 ||| | ||| || |||| | | || | | ||||||| ||||||||||||||| Sbjct 641 GACAAGACCGAGATCAAGTACAAGCTGGCCGTCAGCTACTACCGCCTGTCCATCAACGGC 582 Query 27160 GAAACCGTGATCGAAATCGACGCGCAGAACTTCATCGAACTGGTGGGCGGCAAGGATGCG 27219 | ||||||| |||||| || |||||| ||||| | || ||||| || Sbjct 581 CAGGTGCTGATCGAGATCGACCCGGTCAACTTCGTCGAAGTCGTCAACGGCATCGACCGC 522 Query 27220 CTCACGCAGGTCCGC 27234 || | ||||||||| Sbjct 521 CTGGCCCAGGTCCGC 507 >seq19373 Length=703 Score = 111 bits (122), Expect = 4e-20 Identities = 217/317 (68%), Gaps = 14/317 (4%) Strand=Plus/Plus Query 27407 CGAACTGCGCGGCGTGTCGCTGTCCGATCTCGTGAACCTCGACGTGTCAGCGCTGCACAA 27466 ||| |||||||||||| ||| |||| || || | | |||||| || ||||| | Sbjct 1 CGAGCTGCGCGGCGTGAAGCTCACCGAGCTGCTGCAGATGGACGTGGGCGCCCTGCAGAC 60 Query 27467 GGTGCTTCCGCGTATCACCACGCCGACGCTGACCGAAGCTGACGTGTCCAAGCTGGACCC 27526 |||||| ||||| |||||| ||| ||||| | || || ||| |||| ||||| Sbjct 61 GGTGCTGCCGCGCATCACCCCGCTGACGC------AGGCCGAGGTGCAGCAGCTCGACCC 114 Query 27527 GGCCGACCTGCTGCAACTGGCCGGGATCGTGAGCGGtttttttATGACGAAAG-CCATGC 27585 |||||||| | |||| | | ||| ||||||||||||| || ||| ||| | Sbjct 115 CGCCGACCTCACCGAGCTGGGCACGCAGGTGGTCGGTTTTTTTATG-CGCAAGAGCATCC 173 Query 27586 GAGCAAGCATGGGCTCCCCGACGTAGTCGAGGACGCAATGGCGGACGTGGCAACGGTGTT 27645 | | | | || | ||| || |||||||| ||||| |||||||| | |||||| Sbjct 174 GCG-AGGAATTTG-----CGAGCGCGTAGAGGACGCCATGGCCGACGTGGCCATGGTGTT 227 Query 27646 CGGGTGGACGCCGGTCGTCATGGACGCAATGACTGTTTCTGAACTGATGGAGTGGCGCGA 27705 | ||| ||| | | ||||||| | ||||| | | || || ||||||||||| Sbjct 228 CCATTGGCGGCCAGCGGACATGGACCCTATGACCCTGGCCGAGCTTTCCGAGTGGCGCGA 287 Query 27706 GCGGGCGCGCGTGCGAT 27722 || |||||| |||||| Sbjct 288 ACGTGCGCGCCTGCGAT 304 >seq1720 Length=6403 Score = 91.5 bits (100), Expect = 3e-14 Identities = 133/188 (71%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 25572 TCGACGGCCGTTATCGGTGTCGTCTGTACCGGCGACGATGCCGACCCGATCACGTTCCCG 25631 || |||||||| ||||| |||| || | | ||| ||||| || ||| |||||| Sbjct 6115 TCCACGGCCGTGATCGGCCTCGTGGCCACGGCCAGCGACGCCGATGCGGCCACTTTCCCG 6174 Query 25632 CTGAACAAGCCGGTGCTGCTCACGAACGTGCAGGCCGCGCTCGGCAAGGCGGGCCGAAAG 25691 |||||| ||||||||| |||| || || | || || |||||||||| ||| ||| Sbjct 6175 CTGAACCGTCCGGTGCTGGTCACCAAGGTCGATGCGGCCATCGGCAAGGCCGGCACCAAG 6234 Query 25692 GGCACGCTGTACACGACGCTCGATGCGATCCAGAAACAGGCCCGCCCGTACACCGTCGTG 25751 ||||||||| | | |||| | || ||| || | ||| ||||||| ||||| Sbjct 6235 GGCACGCTGGCCCAGGCGCTGAACGCCATCAAGGAGCAGTGCCGCCCGGTGCTGGTCGTC 6294 Query 25752 GTGCGCGT 25759 |||||||| Sbjct 6295 GTGCGCGT 6302 >seq16944 Length=822 Score = 82.4 bits (90), Expect = 2e-11 Identities = 102/140 (73%), Gaps = 0/140 (0%) Strand=Plus/Minus Query 27387 CTGCGCAAGCCGGGGTCCGGCGAACTGCGCGGCGTGTCGCTGTCCGATCTCGTGAACCTC 27446 ||||||||||| | ||||||| |||||||||||| ||| |||| || || | ||| Sbjct 141 CTGCGCAAGCCCATGGCCGGCGAGCTGCGCGGCGTGAAGCTCACCGAGCTGCTGCAGCTC 82 Query 27447 GACGTGTCAGCGCTGCACAAGGTGCTTCCGCGTATCACCACGCCGACGCTGACCGAAGCT 27506 |||||| || | || | |||||| ||||| |||||| ||| ||||| ||| || Sbjct 81 GACGTGGGCGCCATCCAAACGGTGCTGCCGCGCATCACCCTGCCCACGCTCACCACGGCC 22 Query 27507 GACGTGTCCAAGCTGGACCC 27526 || ||| |||| ||||| Sbjct 21 GAGGTGCAGCAGCTCGACCC 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 113206603741056