Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_021560.1 Length=53102 Score E Sequences producing significant alignments: (Bits) Value seq20980 123 8e-24 >seq20980 Length=634 Score = 123 bits (136), Expect = 8e-24 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 31616 CCTTCGGTGAAGACGACGACGCTATGCCACTCGGTGCGCTCCTTGCGGTCGCCGCTGTCG 31675 ||||| ||||||||||||| | ||||| ||||| || ||||| ||||| | | Sbjct 1 CCTTCATTGAAGACGACGACCGTGTGCCATTCGGTCTTTTCTTTGCGCTCGCCCGAATTG 60 Query 31676 CGGTCGCGCCAGCTTTCGGAAGTCGCAAGGCGAAGGCTGGCGATGCTACCCCCGGCTTGT 31735 ||||| ||||||||||| || ||||||| ||| ||| ||||||| | ||| | || Sbjct 61 CGGTCACGCCAGCTTTCCGACGTCGCAATGCGCAGGTTGGCGATTGGTCGGCCGTCCTGC 120 Query 31736 GTCTTTCGGATTTCCGGATCGGCGCCGAGATGGCCGATAAGAATGACTTTGTTGACGCTA 31795 || || ||||||||||| ||||||| || |||| ||||| || ||||| ||||| Sbjct 121 GTGCGGCGAATTTCCGGATCAGCGCCGACATTTCCGACCAGAATAACCTTGTTTACGCTG 180 Query 31796 CCGGCCAT 31803 || ||||| Sbjct 181 CCAGCCAT 188 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 169733138023152