Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_021772.1 Length=72394 Score E Sequences producing significant alignments: (Bits) Value seq1653 132 2e-26 >seq1653 Length=6607 Score = 132 bits (146), Expect = 2e-26 Identities = 176/242 (73%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 12327 CTGTACCTGCAAGAGCTACTGAAGGTTCTGCTGGTGTAGACTTACGCGCTAACACCTCTG 12386 || ||||| || || || | |||||| || ||| |||| ||||| || | | || Sbjct 3024 CTTTACCTTCATATGCAACAGCAGGTTCAGCGGGTTTAGATTTACGTGCCTGCGTCGATG 2965 Query 12387 AACCATTTGA-ATTGAAACCAGGTGAAACCAAGTTAATTGAAACTGGTTTGGCTATTCAT 12445 || || |||| |||||| ||||| |||| ||| | |||| ||| |||| ||| || Sbjct 2964 AAGCAATTGATATTGAA-CCAGGACAAACTGTTTTAGTGAAAACAGGTATGGCAATTTAT 2906 Query 12446 CTGGACGATGTACATGTAGCTGCAATGATTCTTCCTCGTTCAGGTCTAGGCCATAAACAT 12505 | | |||||| || | |||| | ||| | || ||||||||| |||| |||||||| Sbjct 2905 ATTCATGATGTAAATTTTGCTGGTTTAATTTTACCGCGTTCAGGTTTAGGTCATAAACAC 2846 Query 12506 GGTGTAGTGCTTGGGAACCTTACTGGTCTGATTGATTCAGATTATCAGGGTGAACTTATG 12565 ||| | |||||||| || | |||| ||||||||||||||||||| |||||| | ||| Sbjct 2845 GGTATCGTGCTTGGTAATTTAGTTGGTTTGATTGATTCAGATTATCAAGGTGAATTGATG 2786 Query 12566 GT 12567 || Sbjct 2785 GT 2784 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 231435714450545