Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_021858.1 Length=1908524 Score E Sequences producing significant alignments: (Bits) Value seq559 165 1e-34 seq195 150 2e-30 seq17050 141 1e-27 seq3962 141 1e-27 seq15613 140 4e-27 seq2557 140 4e-27 seq1904 132 6e-25 seq55 132 6e-25 seq23947 131 2e-24 seq8037 125 9e-23 seq4148 105 8e-17 seq8313 104 3e-16 seq367 102 1e-15 seq19109 96.9 4e-14 seq12370 93.3 5e-13 seq266 87.8 2e-11 seq451 86.0 8e-11 >seq559 Length=14452 Score = 165 bits (182), Expect = 1e-34 Identities = 328/477 (69%), Gaps = 8/477 (2%) Strand=Plus/Minus Query 1573767 GACTTTG-GCCTCCCGTGGATCGAAAAGTATCGCCCTATGGTGCTCGACGACATTGTCGG 1573825 ||||||| | |||| ||| | ||||| || ||||| ||||| | ||| | || || Sbjct 13976 GACTTTGAGGCTCCA-TGGGTGGAAAAATACCGCCCGCGCGTGCTGGCGGACGTGGTAGG 13918 Query 1573826 CAACGAGCACGCCGTCGCCTATCT-CAGAGCGCTGGCTGCCGACGGCGACATGCCCAACC 1573884 |||| || | |||| ||| ||| || || || | ||| ||||| | || | Sbjct 13917 CAACCGTGACACGATCGCAAGTCTACAG-GCAATGACTCAAGTAGGCAACATGACAAATC 13859 Query 1573885 TCTTGCTGGCGGGTCCGCCCGGCACGGGCAAGACCACGAGCATCGCGTGTCTGGCGCGTG 1573944 | | || |||||||||| || || ||||||||||| |||||| |||||| ||||| | Sbjct 13858 TGATACTATCGGGTCCGCCGGGTACAGGCAAGACCACAAGCATCTTGTGTCTAGCGCGCG 13799 Query 1573945 TCCTCTTGGGCGCGGCCGCCGACGAGGCCGTGCTCGAACTCAACGCGTCGGACGAGCGCG 1574004 || |||| || || | | |||| ||||| || || || ||||| ||||| |||| Sbjct 13798 AACTTCTGGGGTCGAGCGTCAAGCAGGCGGTGCTAGAGCTTAATGCGTCTGACGACCGCG 13739 Query 1574005 GCGTCGACGTCGTGCGCAAGATCATCAAGCACCACGC-CTCCAAGAGGATCGAC-CTGCC 1574062 | | || || ||||| | |||||| || | ||| ||| ||| || || Sbjct 13738 GTATTGATACTGTACGCAACAAGATCAAGATGTTTGCGCAGCAAAAGG--TGACACTTCC 13681 Query 1574063 GCCCGGACGCCACAAGGTGATCATCCTCGACGAGGCCGACTGCCTCACGTCGGCGGCCCA 1574122 || || ||||||||| | | ||||| |||||||| |||| | | ||| | |||||||| Sbjct 13680 TCCAGGCCGCCACAAGATCGTAATCCTGGACGAGGCGGACTCCATGACGGCCGCGGCCCA 13621 Query 1574123 GCAGGCCCTGCGGTCCACCATGGAAAAGCACACCAACACGACGCGCTTTGCCCTGGCGTG 1574182 ||| || ||||| ||| ||||| | | ||| || | ||||| ||||| || Sbjct 13620 GCAAGCGCTGCGACGCACAATGGAGATCTTTTCGGCCACAACTAGGTTTGCTCTGGCATG 13561 Query 1574183 CAACACGTCGTCGATGGTCATCGAGGCCCTCCAAAGTCGCTGCGCCATTCTGCGCTT 1574239 ||||| || | | | |||| ||| | | |||||||||||||| ||||||||||| Sbjct 13560 CAACAACTCCACAAAGATCATTGAGCCAATTCAAAGTCGCTGCGCTATTCTGCGCTT 13504 >seq195 Length=24554 Score = 150 bits (166), Expect = 2e-30 Identities = 235/327 (72%), Gaps = 17/327 (5%) Strand=Plus/Minus Query 868691 GCCTTGGCGTACTCGCCCACGCGCCGCTCGAAAAAGTTGGTCTTGCCCTCGAGCGAGATC 868750 ||||||| ||| || || || ||| ||| || |||||||||||||||| || |||||| Sbjct 23585 GCCTTGGAGTATTCACCTACACGCTTCTCAAAGAAGTTGGTCTTGCCCTGAAGTGAGATC 23526 Query 868751 AACTCCATCCACGGGAACGGGTTGGGCGTCTTGTAGTGCTT----TTCG-CATCCG-AGC 868804 | |||||||| ||||||||| |||| ||| | || | || || | Sbjct 23525 ATGTCCATCCAGTCGAACGGGTT------CTTGACGTGGTAAATCTTAGACACCCCCAAT 23472 Query 868805 GACGCGAGCAGGCGGTCGGCGACAAACTCGATGTACTGGCACATGAGGCCGGCGTTCATG 868864 || ||||| ||||| || || ||||||||||||||||||||||| | ||||||| Sbjct 23471 GAGTACAGCAGACGGTCAGCCACGAACTCGATGTACTGGCACATGAGCGTTGAGTTCATG 23412 Query 868865 CCGATGAGCGCCACCGGCAGCGACTCGCTCACAAACTCTTTCTCGATCTCGACGGCCTCG 868924 ||||||||| | || || || || || | ||||||||| | |||||| | || || || Sbjct 23411 CCGATGAGCTCAACAGGGAGGGAGTCACACACAAACTCGTGCTCGATAGCCACCGCGTC- 23353 Query 868925 ACG-ATGATCTGCCTGGGCACGTC-GGCCGAGGGCTTGTTGACGAGCATCGTGTAGAGCA 868982 ||| ||||||| | || |||| | ||| |||| ||||| || | | ||| | | Sbjct 23352 ACGAATGATCT-CGTGCACACGACTCTCCGGCAGCTTATTGACCAGTTTGGAGTACATGA 23294 Query 868983 GGCAGGCAAAGTCGCAGTGCA-ACCCT 869008 |||||||||||||| |||| ||||| Sbjct 23293 GGCAGGCAAAGTCGGTATGCATACCCT 23267 Score = 140 bits (154), Expect = 4e-27 Identities = 212/299 (71%), Gaps = 2/299 (1%) Strand=Plus/Minus Query 869631 CCGAGTGGATGTTCTCGATGGCGATCTGGAAGCCGTAAAAGGCCCTCACCTCTGCCACTT 869690 ||||||| ||||||||||| || ||||| || ||||| || || | || | || | Sbjct 22990 CCGAGTGAATGTTCTCGATAGCAATCTGAAAACCGTAGAAACACCGAGCTTCGGGAACCT 22931 Query 869691 GGACCTCCTTCATGAACCGGCCGGCCAGGTTCTCGGCCACGATGCCGTCGCTGGCGGCGA 869750 | || || || |||| ||||||||| || ||| ||||| || ||||| || | Sbjct 22930 GCACTTCGTTGCTGAAGTTCATGGCCAGGTTTTCATTCACAATGCCATCACTGGCTGCAA 22871 Query 869751 AAAAAGCCAGGACGTGCTTGATAAAGTGGCGCTCGTCGTCGCTGAGCGACACCCAGTGGA 869810 | || || || || |||||||||||||| ||||||| ||| |||| ||| | Sbjct 22870 AGAAGGCGAGCACATGCTTGATAAAGTGACGCTCGTTGTCAGTGAGGTTTTTCCAATCTT 22811 Query 869811 CGGTGTCG-GCGCTGAGGTCCACCTCCTCGGCGGTCCAGATCGAGGCCTCGGCCTTTTTG 869869 ||||| || | || |||| |||||| || ||||| | ||||||||| || || ||| Sbjct 22810 TAATGTCGTGCAC-CAGATCCAGCTCCTCAGCCGTCCAAAACGAGGCCTCAGCTTTCTTG 22752 Query 869870 TACATCTCCCATACTTGCTGGTAGCGGATAGGGAAGAGGACAAAGCGGTTGGGGTTGTC 869928 ||||||| ||| || | | | | || |||||||| ||||| ||||||||||| || Sbjct 22751 TACATCTGCCAGACATCATTCTCCTGAATCGGGAAGAGTACAAAACGGTTGGGGTTCTC 22693 >seq17050 Length=817 Score = 141 bits (156), Expect = 1e-27 Identities = 261/371 (70%), Gaps = 15/371 (4%) Strand=Plus/Plus Query 1726676 AGAAAGGTATGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCG-TCGCCACGCTCCC 1726734 || ||| |||||| | || || || | ||| ||||| || | || || |||| | || Sbjct 313 AGGAAGTGATGCGGATTGGACGCCGCACCCACCGCGTC-AGCGGCGATCTTCACGTTGCC 371 Query 1726735 GTCGGTGCCGTTCTTGAAGCCGA-TGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGCA 1726793 |||||||||||||||||||||| || || || ||| |||| || | ||| || |||| Sbjct 372 ATCGGTGCCGTTCTTGAAGCCGACCGGGCA-CGACAGCCCCGAGGCAAGCTCACGATGCA 430 Query 1726794 CCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAAG 1726853 ||||||| ||||| || |||||||| | |||||||||||||||||||| || | || Sbjct 431 CCTGGCTTTCGGTGGTACGCGCGCCGATCGCGCCCCACGCCACCAGGTCGGCGATGTA-- 488 Query 1726854 GGGCCACCAGAGGAC--TGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAG 1726911 || | ||| || ||| || ||||| | | ||| | ||| || | || Sbjct 489 CTGCGGCGAGATCACATCGAGGAATTCGACACCGGCCGGCAGGCCGA--GC-TTGTTGAT 545 Query 1726912 ATCGCGCAACAGGC--GGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCG 1726969 ||||||| ||||| | |||| || |||||| | | | | | | | ||||| Sbjct 546 GTCGCGCAGCAGGCCTCGGGCGATGC--GCAGGCCCTTGTCGATCCTGAAGCTGCCGTCC 603 Query 1726970 AGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAG 1727029 ||||| || || || ||| |||||||| || || || ||||||||||| |||| ||| Sbjct 604 AGGTCCGGATCATTGATCAGACCCTTCCAGCCCACCGTGGTGCGCGGCTTCTCGAAGTAG 663 Query 1727030 GCGCGCATGAC 1727040 |||||||||| Sbjct 664 ACGCGCATGAC 674 >seq3962 Length=3324 Score = 141 bits (156), Expect = 1e-27 Identities = 300/434 (69%), Gaps = 19/434 (4%) Strand=Plus/Plus Query 1726733 CCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGC 1726792 ||||| |||||||||||||| ||||||| | || ||| |||| |||| |||||||||| Sbjct 198 CCGTCCGTGCCGTTCTTGAAACCGATGGGCGCCGACAGGCCCGAGGCCAGCTCGCGGTGC 257 Query 1726793 ACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATA- 1726851 ||||||||||| ||||| ||||| || | ||||||||| | ||||| | | || Sbjct 258 ACCTGGCTCTCCGTCGTACGCGCACCGATGGCGCCCCAGCTGATGAGGTCGCCGATGTAC 317 Query 1726852 AGGGGCCACCAGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGAC--GGC-GACGAC 1726908 ||||| | | | | || || ||| | || ||| | | || | ||| | || Sbjct 318 TGGGGCGAGATCACGTC-CAGGAATTCG-CTGC--CGGCCGGCACGCCCAGGCGGTTGAT 373 Query 1726909 G-AGATCGCGCAACAGGCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGT 1726967 | ||| | ||| | ||| |||||| || |||||| ||| | | |||| | | | | Sbjct 374 GTCGAT-GAGCAGCTGGC-GCGCGATGC--GCAGGCCTTCGTCGATGCGGTAGCTCTCAT 429 Query 1726968 CGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACAT 1727027 | |||| ||||||| || ||||||||||| |||||||| ||||| ||||| |||| | Sbjct 430 CCAGGTAGGGGTCGTTGATGAGGCCCTTCCAGCCGACGGTGGTGCGGGGCTTCTCGAAGT 489 Query 1727028 AGGCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAGGC 1727087 | ||||||| || | |||| ||| | || || || || ||| ||||| Sbjct 490 ACACGCGCATCACGATCTCCAGCGTGTCCTTGTACTGCTCGCGCAC---GGCCTTCAGGC 546 Query 1727088 GTCGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAACCA 1727147 | ||| | || || | | |||| ||||||||||| || || || | |||| |||| Sbjct 547 GGCGGGCGTACTCCAGGGCGGCGGCCGGGTCGTGGATGGAGCAGGGGC---CGATCACCA 603 Query 1727148 GCAGCCGCCGGTCG 1727161 || | |||||||| Sbjct 604 CCAACAGCCGGTCG 617 >seq15613 Length=902 Score = 140 bits (154), Expect = 4e-27 Identities = 145/190 (76%), Gaps = 0/190 (0%) Strand=Plus/Minus Query 92603 GGCGATCTGGCGCGTGAGGGCCTCCTGCACCTGGAAGCGGTCGGAAAACATGTCGACGAT 92662 ||||||||| || |||||| ||||| | || | ||| | | |||| |||||||| Sbjct 283 GGCGATCTGCCGGGTGAGGTTTTCCTGGATTTGCAGGCGCCGTGCATACATATCGACGAT 224 Query 92663 GCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGTGGGCAGGTAGCCCACGTGGGCCTT 92722 ||||| |||||| |||||||| | | |||| || || | |||| ||||||| ||||| Sbjct 223 GCGCGCGATCTTCGACAGGCCGAGCACCTTGCCAGTAGGGATGTAGGCCACGTGCGCCTT 164 Query 92723 GCCCATAAAGGGCAGCAGATGGTGCTCGCACATGGAGAAAAAGTCGACGTCGCGCACGAT 92782 ||| || ||||||||||| ||||||||||||| ||| | | || ||||| ||||| Sbjct 163 GCCGATGAAGGGCAGCAGGTGGTGCTCGCACAGCGAGTAGAGCTCCACGTCCTTGACGAT 104 Query 92783 CACCATCTCG 92792 |||||||||| Sbjct 103 CACCATCTCG 94 >seq2557 Length=4838 Score = 140 bits (154), Expect = 4e-27 Identities = 289/422 (68%), Gaps = 6/422 (1%) Strand=Plus/Minus Query 18070 TTCGGCAAGGTATTTAGGGTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGC 18129 ||||||||| | || | |||||||| || ||||||||||||||| ||| | |||||||| Sbjct 3851 TTCGGCAAGCTGTTCACCGTCACCACGTTCGGCGAGTCGCACGGGCCGGCCATCGGCTGC 3792 Query 18130 ATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTC-AGTT 18188 | ||||| ||| |||||| | || | |||| || |||||| || | || | | | Sbjct 3791 GTGATCGATGGCTGCCCGCCGGGGCTGGCGCTGGACGCGGCCGA-ATTCGCCCACGACCT 3733 Query 18189 GGATCGGCGC-CGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGCG 18247 | | || ||| | ||||| | || || | | | || |||| |||| |||| | Sbjct 3732 GCAGCGCCGCGCCACCGG-CAAGAGCCGGCATACTTCGGCGCGGCGCGAGGCCGACGAGG 3674 Query 18248 TCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTG 18307 || |||| ||| ||| | | | ||||| || |||| | || ||| || | Sbjct 3673 TCGAGATCCTGTCCGGCGTGTACGAGGGCCTGACCACCGGCACCCCGATCGCGCTGCTGA 3614 Query 18308 TGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGCCGCGGCCCT 18367 | |||| ||||||||| | || || || |||| || || | ||||| Sbjct 3613 TCCGCAACACCGACCAGCGCAGCAAGGATTACGCCAACATCGGCCAGCAGTTCCGGCCGG 3554 Query 18368 CACACGCCGACTACACCTACATGGC-CAAGTACGGCATCAAGGCGTCGTCGGGCGGAGGC 18426 || |||||||||| |||| |||| ||||||||||||| | || || || ||| Sbjct 3553 GCCATGCCGACTACAGCTAC-TGGCACAAGTACGGCATCCGCGACCCGCGCGGTGGCGGC 3495 Query 18427 CGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGCCGAGAAATGG 18486 || || || || ||||||||| ||||||||| ||||| |||| ||||||| |||| ||| Sbjct 3494 CGTTCCTCGGCACGCGAGACCACCATGCGCGTGGCCGCTGGCGTGGTCGCCAAGAAGTGG 3435 Query 18487 CT 18488 || Sbjct 3434 CT 3433 >seq1904 Length=5974 Score = 132 bits (146), Expect = 6e-25 Identities = 290/425 (68%), Gaps = 12/425 (3%) Strand=Plus/Plus Query 1726733 CCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGC 1726792 ||||| |||||||||||||||||||||| | || | |||| |||| || ||||| Sbjct 4794 CCGTCCGTGCCGTTCTTGAAGCCGATGGGCGCCGAGATGCCCGAGGCCAGTTCACGGTGG 4853 Query 1726793 ACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAA 1726852 |||||||| || || |||||||| || | ||||||||| | ||| || || | || Sbjct 4854 ACCTGGCTTTCCGTGGTGCGCGCACCGATGGCGCCCCAGCTGATCAGATCGGCGATGTAC 4913 Query 1726853 -GGGGCCACCAGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAG 1726911 |||| | | | | || |||||| ||| | ||| | | |||| | || Sbjct 4914 TGGGGAGAGATCACGTCC-AGGAACTCGCTGGCGGCCGGCACGCCCA-GGCG--GTTGAT 4969 Query 1726912 ATCGCGCAACAG--GCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCG 1726969 ||| || ||| || |||| | || |||||| ||| | | |||| | | ||| Sbjct 4970 GTCGATCAGCAGTTGCCGCGCAATGCG--CAGGCCCTCGTCGATGCGGTAGCTCTGGTCC 5027 Query 1726970 AGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAG 1727029 |||| ||| ||| || ||| |||||||| || ||||| |||||||||||||||| || Sbjct 5028 AGGTAGGGATCGTTGATCAGCCCCTTCCAGCCCACGGTGGTGCGCGGCTTTTCGAAGTAC 5087 Query 1727030 GCGCGCATGACCACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAGGCGT 1727089 ||||||| || | |||| ||| | || |||| | ||||| |||||| Sbjct 5088 ACGCGCATCACGATCTCCAGCGTGTCCTTGTACT--GCTCGCGTATGGGCGC-CAGGCGG 5144 Query 1727090 CGGCCATAGTCGACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAACGATAACCAGC 1727149 || | || |||| | |||||||||| ||||| || || || || ||||| |||||| Sbjct 5145 CGCGCGTACTCGATGGCGGCCGCCGGATCGTGGATGGAGCAGGGGCCGACGATGACCAGC 5204 Query 1727150 AGCCG 1727154 || || Sbjct 5205 AGGCG 5209 >seq55 Length=37975 Score = 132 bits (146), Expect = 6e-25 Identities = 292/433 (67%), Gaps = 6/433 (1%) Strand=Plus/Plus Query 18060 CATGAGCACATTCGGCAAGGTATTTAGGGTCACCACCTTTGGCGAGTCGCACGGGGCGGG 18119 ||||||||| |||||| | ||| | || || ||||| ||||||||||| | ||| Sbjct 34236 CATGAGCACTTTCGGCCGTATCTTTCGCGTAACGACCTTCGGCGAGTCGCATTGCAAGGG 34295 Query 18120 CGTCGGCTGCATCATCGACGGCGTGCCGCCGT-GCATGCCACTGGCCGAGGCCGACATCC 18178 ||| ||||||||| | ||||||||||| || | || || | ||| | || || ||||||| Sbjct 34296 CGTAGGCTGCATCGTTGACGGCGTGCCTCCTTCGCTTG-CTCTGACGGAAGCTGACATCC 34354 Query 18179 AGCCTCAGTTGGATCGGCGCCGACCGGGCCAGGGCGCACTTTCCACGCCGCGCAACGAGC 18238 |||| ||| | || || || || || || || || | ||||| ||| ||||| Sbjct 34355 AGCCGCAGCTTACGCGCCGTCGTCCCGGTCAAAGCAAGCTCACGACGCCTCGCGACGAGA 34414 Query 18239 CCGATCGCGTCATCATCCAGTCGGGCACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCG 18298 ||| || | |||| | || |||||||| || | ||||| || |||| | | Sbjct 34415 AGGATGCGGTAACCATCATGAGTGGTACGGAGAAGGGATTTACGCTTGGTACGCCGTTAG 34474 Query 18299 GCCTCTTTGTGGCCAACCGCGACCAGCGGCCCGTCGACTATTCCGACATGTGCAAGGTGC 18358 ||||| ||| |||| || ||| || ||||| || ||| | |||| Sbjct 34475 CGCTCTTCGTGCCCAATGAGAACGTGCGCCCAAAGGACTACAAGGAGATGGATGAAGTGC 34534 Query 18359 CGCGGCCCTCACACGCCGACTACACCTACATGGCCAAGTACGGCATCAAGGC--GTCGTC 18416 | || ||| |||||||||||||| ||| | |||||||||| | ||| || || Sbjct 34535 CACGCCCCGGTCACGCCGACTACACGTACCAGATGAAGTACGGCACCCGGGCCAGTAGT- 34593 Query 18417 GGGCGGAGGCCGGTCGTCTGCCCGCGAGACCCTCATGCGCGTCGCCGCCGGCGCGGTCGC 18476 || || || || | ||| ||||||||| | || || ||| |||| ||||| || Sbjct 34594 -GGTGGGGGTCGTGCTAGTGCTCGCGAGACCATTGGCCGTGTGGCCTCCGGTGCGGTGGC 34652 Query 18477 CGAGAAATGGCTC 18489 || || |||||| Sbjct 34653 TGAAAAGTGGCTC 34665 Score = 105 bits (116), Expect = 8e-17 Identities = 100/128 (78%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 19065 GTGACGTGCGTGTGTCGCAACGTGCCGGCAGGCCTCGGCGAGCCGTGCTTTGACAAGATC 19124 |||||||||||| |||||| | ||| | || || ||||| || |||||||||||||| Sbjct 35101 GTGACGTGCGTGATTCGCAATGCGCCAGTGGGTCTGGGCGAACCATGCTTTGACAAGATG 35160 Query 19125 GAGGCCGCGCTCGCCCACGCCATGCTGTCGATCCCGGCCACCAAGGGATTCGAGATTGGC 19184 |||| | || || ||||||||| |||| || |||||||| ||||| || || |||||| Sbjct 35161 CAGGCTGTCCTGGCGCACGCCATGATGTCCATTCCGGCCACAAAGGGTTTTGAAATTGGC 35220 Query 19185 AGCGGGTT 19192 ||||| Sbjct 35221 TCTGGGTT 35228 >seq23947 Length=529 Score = 131 bits (144), Expect = 2e-24 Identities = 312/459 (68%), Gaps = 12/459 (3%) Strand=Plus/Minus Query 1726684 ATGCGGCTGGGCGGCGGCGCGCACGGCGTCGAGTGCCGTCGCCACGCTCCCGTCGGTGCC 1726743 |||||| || | || || | || ||||| | || || |||| | ||||||||||| Sbjct 487 ATGCGGATGCGACGCCGCACCGACCGCGTCCACCGCGATCTTCACGTTGCCGTCGGTGCC 428 Query 1726744 GTTCTTGAAGCCGAT-GGCCAGCGGCAGTGCCGACG-CCATCTCGCGGTGCACCTGGCTC 1726801 |||||||||||||| || || || ||| |||| | ||||||| ||||||||||||||| Sbjct 427 GTTCTTGAAGCCGACCGGGCA-CGACAG-GCCGCTGGCCATCTCACGGTGCACCTGGCTC 370 Query 1726802 TCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATAAGGGGCCACC 1726861 ||||| || || ||||| | |||||||||||||||||||| | || | | | Sbjct 369 TCGGTGGTACGTGCGCCGATCGCGCCCCACGCCACCAGGTCGCTGATGTACTGCGGCGAG 310 Query 1726862 AGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGACGGCGACGACGAGATCGCGCAAC 1726921 | | | ||| | ||| | | | ||| | ||| ||| || || ||||||| | Sbjct 309 ATGGTATCGAGGTATTCGCAGCCGGCCGGCAGGCCGA--GCG-CGTTGATGTCGCGCAGC 253 Query 1726922 AGGCGGCGCGAC-GCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGTCGAGGTCGGGGTC 1726980 || | ||||| | |||| |||||| | | | ||||| || | || || Sbjct 252 AGCCCGCGCGCCAGCCG-AAGGCCGCGATTGATATCGAAGCTGCCGTCCAGCGCCGGATC 194 Query 1726981 GCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACATAGGCGCGCATGAC 1727040 | || |||||| ||||| || |||||||| || |||||||||| || ||||||| || Sbjct 193 GTTGATCAGGCCTTTCCAACCCACGGTCGTACGAGGCTTTTCGAAGTACACGCGCATCAC 134 Query 1727041 CACGCAAAGCGCGTCGCCGACCTCGTCTCGGACAAAGGCGCGCAGGCGTCGGCCATAGTC 1727100 || || | ||| | | | |||| || || ||| |||||| | | || || Sbjct 133 GACTTCCAGATCATCGGCCAGCGCGTCGCG--CAGCGGC-TTCAGGCGCTTGGCGTATTC 77 Query 1727101 GACGACGGCCGCCGGGTCGTGCGCCGAACACGGACCAAC 1727139 || | ||||| ||||||||| ||| ||||| || || Sbjct 76 GATGGCGGCCTTCGGGTCGTGGATCGAGCACGGGCCCAC 38 >seq8037 Length=1796 Score = 125 bits (138), Expect = 9e-23 Identities = 223/313 (71%), Gaps = 13/313 (4%) Strand=Plus/Plus Query 1726733 CCGTCGGTGCCGTTCTTGAAGCCGATGGCCAGCGGCAGTGCCGACGCCATCTCGCGGTGC 1726792 ||||| |||||||||||||| ||||||| | || ||| |||| |||| |||||||||| Sbjct 1474 CCGTCCGTGCCGTTCTTGAAACCGATGGGCGCCGACAGGCCCGAGGCCAGCTCGCGGTGC 1533 Query 1726793 ACCTGGCTCTCGGTCGTGCGCGCGCCCACGGCGCCCCACGCCACCAGGTCTGCCAAATA- 1726851 ||||||||||| ||||| ||||| || | ||||||||| | ||||| | | || Sbjct 1534 ACCTGGCTCTCCGTCGTACGCGCACCGATGGCGCCCCAGCTGATGAGGTCGCCGATGTAC 1593 Query 1726852 AGGGGCCACCAGAGGACTGAGAAACTCGACGGCCACGGGCTGATCGAC--GGC-GACGAC 1726908 ||||| | | | | || || ||| | || ||| | | || | ||| | || Sbjct 1594 TGGGGCGAGATCACGTC-CAGGAATTCG-CTGC--CGGCCGGCACGCCCAGGCGGTTGAT 1649 Query 1726909 G-AGATCGCGCAACAGGCGGCGCGACGCCGTCAGGCCGTCGGCCAGGCGGCACGACCCGT 1726967 | ||| | ||| | ||| |||||| || |||||| ||| | | |||| | | | | Sbjct 1650 GTCGAT-GAGCAGCTGGC-GCGCGATGC--GCAGGCCTTCGTCGATGCGGTAGCTCTCAT 1705 Query 1726968 CGAGGTCGGGGTCGCTGGCCAGGCCCTTCCACCCGACGGTCGTGCGCGGCTTTTCGACAT 1727027 | |||| ||||||| || ||||||||||| |||||||| ||||| ||||| |||| | Sbjct 1706 CCAGGTAGGGGTCGTTGATGAGGCCCTTCCAGCCGACGGTGGTGCGGGGCTTCTCGAAGT 1765 Query 1727028 AGGCGCGCATGAC 1727040 | ||||||| || Sbjct 1766 ACACGCGCATCAC 1778 >seq4148 Length=3204 Score = 105 bits (116), Expect = 8e-17 Identities = 137/186 (74%), Gaps = 9/186 (5%) Strand=Plus/Minus Query 18066 CACATTCGGCAAGGTATTTAGGGTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGG 18125 ||| ||||| | |||| | ||||||| ||| ||||| ||||| || ||| | |||| Sbjct 370 CACCTTCGGAACCCTATTCACTGTCACCAACTTCGGCGAATCGCATGGCCCGGCCATCGG 311 Query 18126 CTGCATCATCGACGGCGTGCCGCCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCA 18185 |||| |||||||||| |||||| ||||| ||||| |||||| |||||||||| | Sbjct 310 CTGCGTCATCGACGGTTGCCCGCCGGGCATGGCACTGAGCGAGGCGGACATCCAGCACGA 251 Query 18186 GTTGGATCGGCGCCGACCGGGC--CAGGGCGCACTTTCC--ACGCCGCGCAACGAGCCCG 18241 |||| || ||||| || ||| ||| || ||| |||| |||||||||||| | Sbjct 250 CCTGGACCGCCGCCGCCCCGGCACCAG----CAAGTTCGTGACGCAGCGCAACGAGCCGG 195 Query 18242 ATCGCG 18247 | |||| Sbjct 194 A-CGCG 190 >seq8313 Length=1727 Score = 104 bits (114), Expect = 3e-16 Identities = 224/324 (69%), Gaps = 12/324 (4%) Strand=Plus/Minus Query 18088 GTCACCACCTTTGGCGAGTCGCACGGGGCGGGCGTCGGCTGCATCATCGACGGCGTGCCG 18147 ||||||| ||| || || || ||||| ||| | | |||||| | ||||| || ||| Sbjct 345 GTCACCAACTTCGGTGAATCCCACGGCCCGGCCATTGGCTGCGTGATCGATGGTTGCCCG 286 Query 18148 CCGTGCATGCCACTGGCCGAGGCCGACATCCAGCCTCAGTTGGATCGGCGCCGACCGGG- 18206 || ||||| | ||| ||||||||||||||||| | | |||| || ||||| || || Sbjct 285 CCCGGCATGGCGCTGACCGAGGCCGACATCCAGGCCGATCTGGACCGCCGCCGTCCCGGC 226 Query 18207 -CCAGGGCGCACTTTCCACGCCGCGCAACGAGCCCGATCGC-GTCATCATCCAGTCGGGC 18264 |||| ||| | || | |||| ||||||||| ||| ||| |||| |||||| Sbjct 225 ACCAGCCGCCACGT--GACCCAGCGCGCCGAGCCCGA-CGCGGTCGAGATCCTCTCGGGC 169 Query 18265 ACGGAGAACGGCCTCACGCTCGGCTCGCCCGTCGGCCTCTTTGTGGCCAACCGCGACCAG 18324 | | | ||| || |||| ||||| ||| ||| | | ||| |||||| Sbjct 168 GTGTACGAAGGCAAGACCACCGGCACGCCCATCGCCCTGCTGATCCGCAATACTGACCAG 109 Query 18325 CGGCCCGTCGACTATTCCGACAT-GTGCA-AGGTGCCGCGGCCCTCACACGCCGACTACA 18382 || | || || ||| |||| | ||| || | |||| || ||||||||||||| Sbjct 108 CGCAGCAAGGATTACTCCAACATCGCGCAGAGCTTCCGC--CCGGGCCACGCCGACTACA 51 Query 18383 CCTACATGGC-CAAGTACGGCATC 18405 ||||| |||| ||||||||||||| Sbjct 50 CCTAC-TGGCACAAGTACGGCATC 28 >seq367 Length=17864 Score = 102 bits (112), Expect = 1e-15 Identities = 106/139 (76%), Gaps = 0/139 (0%) Strand=Plus/Minus Query 1592154 TCGAGCAGCCCACCCTCTTTGAGTTGATCCTCGCCGCCAACTACCTCGACATCAAGCCTC 1592213 |||||||| | ||| |||||| | ||| | |||||||||||| | || || ||| || Sbjct 5122 TCGAGCAGGAAATCCTGTTTGAGCTCATCTTGGCCGCCAACTACATGGATATTAAGAGTC 5063 Query 1592214 TGCTCGATCTTGGGTGCAAGTCTGTGGCCAACATGATCAAGGGCAAGTCGCCCGAGGAGA 1592273 |||| ||||| | ||| ||||| | ||||||||| |||||| | ||| |||||| Sbjct 5062 TGCTGGATCTGGCATGCGCAAAAGTGGCTAGCATGATCAAAGGCAAGACACCCCAGGAGA 5003 Query 1592274 TCCGCAAGACCTTTAACAT 1592292 ||||| |||| |||||||| Sbjct 5002 TCCGCGAGACGTTTAACAT 4984 >seq19109 Length=716 Score = 96.9 bits (106), Expect = 4e-14 Identities = 235/343 (69%), Gaps = 15/343 (4%) Strand=Plus/Minus Query 92594 GATGCACTCGGCGATCTGGCGCG-TGAGGGCCTCCTGCACCTGGAAGCGGTCGGAAAACA 92652 |||||||| |||||||| |||| | | ||||||||||||||||||| | | ||| Sbjct 521 GATGCACTGCGCGATCTG-CGCGGTCATCTTCTCCTGCACCTGGAAGCGGCGCGCATACA 463 Query 92653 TGTCGACGATGCGCGGGATCTTGCTCAGGCCGATGATCCTGCCCGTGGGCAGGTAGCCCA 92712 ||| || | ||||| | |||||| | ||| | | | |||| |||||| ||||||| Sbjct 462 CGTCCACCACGCGCGCCAGCTTGCTGATGCCCACCACCTTGCCGTCGGGCAGATAGCCCA 403 Query 92713 CGTGGGCCTTGCCCATAAAGGGCAGCAGATGGTGCTCGCACATGG-AGAAAAAGTCGACG 92771 |||| || ||| || | ||| || ||||||||||| |||| || |||| | Sbjct 402 CGTGCGCGCGGCCGATGATCGGCGCCATGTGGTGCTCGCA-ATGGCTTTCGAACTCGATG 344 Query 92772 TCGC---GCACGATCA--CCATC-TCGCCCGAGGCCTCGGCAAAGAGCGCGTCGCC-GAT 92824 |||| ||||||||| | || | ||| | | | || | ||| | ||| |||| ||| Sbjct 343 TCGCGCAGCACGATCATCTCGTCGTAGCCGGCGACTTCCTCGAAG-GTGCG-CGCCAGAT 286 Query 92825 GGCCTCGGCCAGCGTCATGCGGTGGCCGCGCGTGCGCTCCACCATGGCCTTGGCCACGCG 92884 ||| | | ||| ||| ||||| | || ||||||||||||||| Sbjct 285 --ATTCGCGCGGATCCATCTGGTAGCCGCTGAACCAGTCGCGGTAGGCCTTGGCCACGCG 228 Query 92885 CATCGGCGTGTCCAGGAGGCCCTCGCGCCGCACGTCCTCGCCC 92927 | | ||||||||||| || ||||||||| | ||||||||| Sbjct 227 CTTGGGCGTGTCCAGCAGCCCCTCGCGCGTCGGATCCTCGCCC 185 >seq12370 Length=1162 Score = 93.3 bits (102), Expect = 5e-13 Identities = 107/144 (74%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 1275756 GCCGACGCCGCCGGGCCTCAAGGCCAAGGACTTGATCGGACTGCCGTGGCGCGTGGCCTT 1275815 |||| | ||| | ||||| || | |||||| ||||||| | |||||| |||||||| Sbjct 376 GCCGCCACCGGCCGGCCTGAAACCGAAGGACCTGATCGGCATCCCGTGGATGGTGGCCTT 435 Query 1275816 TGCCCTGCAGGCCGACGGCTGGTACCTGCGCTCGGACATTATATGGCACAAGCCCAACTG 1275875 || || | || || |||||||||||||| |||||| || ||| |||||| ||| Sbjct 436 CGCGCTACGTGCGGATGGCTGGTACCTGCGTCAGGACATCATCTGGTCCAAGCCGAACCC 495 Query 1275876 CCAGCCCGAGTCGGTGCGCGACCG 1275899 | ||| ||||| |||||||| || Sbjct 496 CATGCCGGAGTCCGTGCGCGATCG 519 >seq266 Length=20885 Score = 87.8 bits (96), Expect = 2e-11 Identities = 152/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 1254348 GCCAGTTCGCCGCGCATGATCAGGCGCACGGCGGTCTGGATCTCGCGCGTGCCGATCGTG 1254407 |||| ||||| | | ||||| ||||| || |||||||||||||| | | || Sbjct 14754 GCCAACTCGCCAGGAAGCATCAGACGCACCGCCGTCTGGATCTCGCGGCTCGACAAAGTA 14695 Query 1254408 TTGCGCTTGTTCGAGTGCGCCAGACGGCCGGCCTCGGTGCCGATGCGGTCGATCATGTCG 1254467 | |||||| | | | || ||| ||||| | | ||||| |||| |||||| Sbjct 14694 CTCTTCTTGTTGTATCGTGAAAGCTTGCCCGCCTCCGAAGCAATGCGCTCGAAAATGTCG 14635 Query 1254468 TTGACAAACGAGTTCATGACCGACAT--CGA-CTTGTTGGAGATGCCCACGTCGGGGTGC 1254524 |||| ||||||||||| | |||||| || |||| || || ||| ||| |||||| Sbjct 14634 TTGATGAACGAGTTCATAATCGACATACCGCGCTTGCTG---ATACCCGTGTCAGGGTGC 14578 Query 1254525 ACCTGCTTGAGCACCTTGTAGATGAACGACGAGTACGA 1254562 ||||| | ||||||||||||| ||| ||| ||||| Sbjct 14577 ACCTGACGCAACACCTTGTAGATGTACGTCGAATACGA 14540 >seq451 Length=16219 Score = 86.0 bits (94), Expect = 8e-11 Identities = 185/277 (67%), Gaps = 0/277 (0%) Strand=Plus/Plus Query 1630066 TGGTCGACGTAGCGCGCCGTGTCGTTAAAGACGCGGAGCATGGGCACGAGGCCGTTGGAC 1630125 ||||| || || || |||||||||||||| ||||| | |||||| | || |||||||| Sbjct 8984 TGGTCCACATACCGAGCCGTGTCGTTAAACACGCGCAACATGGGGATGATACCGTTGGAA 9043 Query 1630126 TCGCCGTTGGTGCCCGCCACGTAGGCGCCGGCGGCGCGCACCTTGTGCGCGGCAAAGCCG 1630185 ||||| || || | |||| | | || || | |||||| | | || Sbjct 9044 GACCCGTTAGTACCACGGATGTAGCTGTTCGTAGCTCGGATATTGTGCATGCTGATCCCA 9103 Query 1630186 ATGCCGCCGGCCGACTTGGAGATGAGCGCGCACTGTTTGAGCGTGTCGTAGATGCCCTCG 1630245 || || || ||| |||| ||||| || || || || | || || ||||| || || Sbjct 9104 ATACCTCCCGCCCACTTTGAGATACAAGCACATTGCTTCAATGTATCATAGATTCCTTCA 9163 Query 1630246 ATCGAGTCGGCCTTCATGTCCACGAGAAAGCACGACGAGTTTTGCGGGTGCGCCGTGCCG 1630305 || || || | | |||| | | | ||| ||||| || |||||| | | ||||| Sbjct 9164 ATTGAATCATCTTGCATGGCAAGTAAAAAACACGAAGATAATTGCGGCCGTGGAGTGCCA 9223 Query 1630306 GCGTTGAAGAGCGTGGGCGTCGCCGCGGTGAACAACT 1630342 || || || | |||||||||||| ||| || |||| Sbjct 9224 GCATTAAACAACGTGGGCGTCGCATGGGTAAAGAACT 9260 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6104222703230863