Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_023502.1 Length=109558 Score E Sequences producing significant alignments: (Bits) Value seq8212 104 2e-17 >seq8212 Length=1751 Score = 104 bits (114), Expect = 2e-17 Identities = 144/197 (73%), Gaps = 6/197 (3%) Strand=Plus/Minus Query 31238 TGGAACGGCACGTTCAAGTGGGCCTGGACGGATAACCCGGCGTGGGTGCTCTACGACATC 31297 ||| |||| || |||||| | | |||||| | || ||||| |||||| ||| ||||||| Sbjct 1634 TGGGACGGTACCTTCAAGAGTGGCTGGACCAACAATCCGGCCTGGGTGTTCTTCGACATC 1575 Query 31298 ATGACCAATGATCGCTTCGGTCTTGGCGAGGATATCGACGCCTCGC-AGGTGGACAAGTG 31356 | ||||| ||||||||||| || ||| | | | ||| | |||||||||||| Sbjct 1574 GTCACCAACGATCGCTTCGGCCTGGGCCATCGTGT-TCCGCTGGACTGGGTGGACAAGTG 1516 Query 31357 GTCGCTCTACGAGATCGCGCAATACGCAGACCAGAAC--GTGCCCGATGGCCGTGGCGGC 31414 | ||| ||| ||||||||| ||| || |||| || |||||||| |||||| Sbjct 1515 GCGGCTGTACCAGATCGCGCGCTACTGCGA--TGAACTGGTCAGCGATGGCCAGGGCGGC 1458 Query 31415 AACAAGCCGCGCTTCAC 31431 || ||||||||||||| Sbjct 1457 AAGGAGCCGCGCTTCAC 1441 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 350309004366101