Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_023579.1 Length=75568 Score E Sequences producing significant alignments: (Bits) Value seq1494 89.7 2e-13 >seq1494 Length=7149 Score = 89.7 bits (98), Expect = 2e-13 Identities = 66/76 (87%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 41787 GGTCGTTAGCTCAGTTGGTTAGAGCACCGGACTTTTAATCCGGTTGTCATTGGTTCGAGG 41846 || |||||||||||||||| |||||| ||||||||||||||| | |||| |||||||| Sbjct 1989 GGACGTTAGCTCAGTTGGT-AGAGCAGCGGACTTTTAATCCGTTGGTCACTGGTTCGACC 2047 Query 41847 CCAATACGACCTACCA 41862 ||| |||| ||||||| Sbjct 2048 CCAGTACGTCCTACCA 2063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 241588115219891