Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_023639.1 Length=1168989 Score E Sequences producing significant alignments: (Bits) Value seq8878 443 2e-118 seq3663 293 2e-73 seq14357 226 2e-53 seq11257 131 1e-24 seq16146 123 2e-22 seq1324 123 2e-22 seq6757 105 5e-17 seq8376 104 2e-16 seq806 98.7 7e-15 seq250 96.9 3e-14 seq5137 89.7 4e-12 >seq8878 Length=1618 Score = 443 bits (490), Expect = 2e-118 Identities = 1007/1491 (68%), Gaps = 43/1491 (3%) Strand=Plus/Plus Query 281416 TTTATCAGCGGCAGTCACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAAT 281475 |||||| | |||| || || || |||||||||||||| | ||||| || || Sbjct 6 TTTATCCTCAGCAGAGACGTTCAGGATACCATTGGCATCAATGTCAAAGCAAACAGTGAT 65 Query 281476 TTGAGGGACCCCTCTCTGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATT 281535 ||||| || || || ||||||| || || || ||| | ||| | |||| | ||| Sbjct 66 CTGAGGCACACCCCTTGGAGCAGGAGGAATACCAGACAACTCAAACTTACCCAAAAGATT 125 Query 281536 ATTATCTTTAGTGAATTTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATT 281595 || || ||||| | || |||||| || || | |||||| || ||| ||||| Sbjct 126 GTTGTCCTTAGTTCTTGCTCTTTCACCTTCAAATACTTGGATCAAGACACCAGGCTGATT 185 Query 281596 ATCTGAATAAGTTGTAAATACTCTGGATTTTTTACAAGGAATTGTTGTGTTTCT----AT 281651 || || || || | || ||| ||| || |||||| |||||||| || || Sbjct 186 GTCAGAGTATGTGGAGAAGACTTGTTCTTTCTTCGTAGGAATCGTTGTGTTCCTCGGGAT 245 Query 281652 CAATAATATTGGTCATAATACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACAT 281711 ||| || | ||||| | || || || ||||| || || || || || |||||||| | Sbjct 246 CAA-AACA---GTCATCACTCCTCCGGCAGTTTCCAATCCTAGTGACAGGGGAGTGACGT 301 Query 281712 CAACTAGGACAATATTTTGAAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAA 281771 ||| || | || | ||| | || |||| || ||| ||||| || ||||||| Sbjct 302 CAAGAAGCAAAAGGTCTTGCACCTTCTCATTTCCTTCTCCACTTAGAATTGCAGCTTGAA 361 Query 281772 TAGCAGCACCATATGCAACAGCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCAT 281831 ||||||||||| |||||||||||||| ||||| | | | | || | ||||||| Sbjct 362 CCGCAGCACCATAAGCAACAGCTTCATCGGGATTGATACTCTTGCAGAGCTCCTTACCAT 421 Query 281832 TGAAAAAAT-TTGAAAGAAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAAT 281890 |||| |||| || || || ||| || || || ||||| | |||||||| || | Sbjct 422 TGAAGAAATCCTGCAACAA-TTGCTGCACTTTCGGGATACGGGTAGATCCTCCCACAAGC 480 Query 281891 ACAATTTCATGCACCTGTGAT-TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGG 281949 |||| ||||| | | ||| | ||||||| || | |||| ||| || ||||| || Sbjct 481 ACAACATCATG-AACAGTGCTCTTATCCATCTTGGCATCCCTCAAACACTTCTCAACAGG 539 Query 281950 TTCAAGACCAGCTCTAAACAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGT 282009 || | | ||||||| || || || || ||| | || ||||||| || Sbjct 540 CTCCATGCATTTCCTAAACAGATCCATGTTGAGCTCCTCAAATCTGGCCCTAGTAATGGT 599 Query 282010 GACATTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGA 282069 | | | |||||||||||||| |||||||||||| ||||| ||||| |||| | || Sbjct 600 GGAGTAAAAATCAATTCCTTCGTACAAAGAATCAATCTCAATGGTAGTCTGAGCAGTTGA 659 Query 282070 AGATAGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGA 282129 ||| | | | ||||| | |||||| ||||| || | || | | |||| |||| | Sbjct 660 AGACAACGTTCTCTTAGCCCTTTCACAGGCTGTTCTCAACCTCCTAAGGGCTCTTGC--A 717 Query 282130 TTGATTC--AAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATG--TTACAA 282185 || | | | |||| | ||||||||||| || || || | | | | ||| | || | Sbjct 718 CTGCTACCAAGATCTTTCTTATATTTTCTTTTAAATTCCTGAGTAAA--ATGGTTAACTA 775 Query 282186 GACGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGA 282245 ||||||||||| |||||||| ||||| | |||| ||||| ||| || | || | | Sbjct 776 ACCGATTATCAAAGTCTTCACCACCCAAATGGGTATCTCCTGCCGTGGCCTTGACCTCAA 835 Query 282246 AAAGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAA 282305 | | || ||||||| || || |||| ||||||| ||||| || || | |||||||| Sbjct 836 AGATACCCTCTTCAATAGTTAATAGAGAAACATCAAAAGTTCCCCCTCCTAGATCAAAAA 895 Query 282306 TAAGTACATTCATTTCT-------TTGTCTTG-GTTTTTATCAAGACCATACGCAAAAGC 282357 | | ||||| ||||| || | || || || || ||||| |||| || Sbjct 896 TCAAAACATT--TTTCTCACCAACAGAGCTAGCCTTCTTGTCCAGCCCATAAGCAATTGC 953 Query 282358 AGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATC 282417 || ||||||||||| || || ||||||| ||||| || |||| ||| || ||||| Sbjct 954 GGCTGCAGTTGGTTCGTTGATGATTCTCATCACATTTAGTCCAGAAATGACGCCGGCATC 1013 Query 282418 TTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGT 282477 || || || || || || || || || ||||||||||| || |||| ||| || | | | Sbjct 1014 CTTTGTAGCCTGCCTCTGAGAGTCATTGAAATATGCAGGGACTGTAACAACAGCGT-TCT 1072 Query 282478 TACTTCT-TTTCCAATATAAGCGCTT--GCTGTTTGTTTCATTTTACTTAAAATCATTGA 282534 | | | |||||| ||| ||||| || | | ||||||||| | | || ||| || Sbjct 1073 TGATGGTGGTTCCAAGATA--CGCTTCAGCAATCTCCTTCATTTTAGTCAGAACCATCGA 1130 Query 282535 TGAAATTTGTTCTGGAGAATATTGCTTGGATTCATTTTGATATGATACTTCAA-AATATG 282593 ||||||| |||| || ||||||| ||| || || | || ||| ||| | Sbjct 1131 AGAAATTTCCTCTGCAGCGAATTGCTTTTCTTCTCCTTTGTAAGTAACAACAATCATA-G 1189 Query 282594 GTTTATTACC---AACATTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACAC 282650 | || | | || ||| ||||| || ||||| | ||||| || || || Sbjct 1190 GCTTCTCCGCTGGCCCAGAAATGACTTTGAAGGGCCACAACTTCATGTCATTCTGGACTG 1249 Query 282651 TTTGGTCATTAAAATCT-CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGA 282709 || | || | ||||| || ||||| | || |||||||| |||| || ||||| ||| Sbjct 1250 TTGGATC-GGAGAATCTCCTTCCAATAAGACGCTTTGCATCGAAAACTGTGTTGGTGGGA 1308 Query 282710 TTAACTGCAGCTTGATATTTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAA 282769 || | || |||||| |||||| |||||||| ||||| | ||||| || || || | Sbjct 1309 TTCATGGCGACTTGATTTTTGGCGGCATCTCCGATCAGCCGCTCTGTGTCGGTGAAAGCT 1368 Query 282770 ACATATGATGGAGTTGTGCGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTT 282829 ||||| |||||||| || ||||| || ||||| || |||||||| || || ||| | Sbjct 1369 ACATAAGATGGAGTAGTCCGATTTCCCTGATCGTTGGCAATAATCTCCACCCGGTCATGT 1428 Query 282830 TGCCATACACCTACACAACTAAAAGTTGTTCCTAAATCAATACCAATAGCA 282880 ||||| || ||||| || | | || ||||| | ||| || || |||||| Sbjct 1429 TGCCACACTCCTACGCAGGAATATGTGGTTCCAAGATCGATTCCGATAGCA 1479 >seq3663 Length=3564 Score = 293 bits (324), Expect = 2e-73 Identities = 985/1515 (65%), Gaps = 35/1515 (2%) Strand=Plus/Minus Query 281380 ATTAGTAATAGTAATATTCTTGGATTTGTTTGTTGATTTATCAGCGGCAGTCACATTAAG 281439 ||| ||||| ||||| || || |||| | ||||| || | || | |||||| | Sbjct 2695 ATTGGTAATCGTAATCTTGTTCTCTTTGCCGCTCGATTTCTCCACCGCCGACACATTCAA 2636 Query 281440 AATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTCTGAGCA-- 281497 ||| ||||| |||| | |||||| || || ||||||||||| || ||||| || ||| Sbjct 2635 AATCCCATTCACATCAATATCAAACGTCACGTCAATTTGAGGCACACCTCT-TG-GCATG 2578 Query 281498 GGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAATTTTCGT 281557 || || || || |||| ||||| | |||||| || |||||| | || | || Sbjct 2577 GGCGGTATACCATCCAGGTTAAACTTGCCCAGAAGATGATTATCGTGCGTCATCGAGCGC 2518 Query 281558 TCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTAAATACT 281617 || || || || | ||| || || ||| || ||||| | ||| || | ||| | Sbjct 2517 TCGCCTTCAAACACTTGAATCAATACACCAGGCTGGTTATCAGCATACGTCGAGAATGTT 2458 Query 281618 CTGGATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAATACCACCA 281677 || || || ||||| || || || | ||| | || ||||| | ||||| Sbjct 2457 TGCGACTTCTTCGCAGGAACCGTAGTATTACGTGGAATGAGTTTCGTCATCACTCCACCT 2398 Query 281678 GCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTGAAGTTTT 281737 ||||| || || ||||| || | |||| ||||| | || | | || || | || Sbjct 2397 GCTGTCTCCAAGCCAAGCGACAACGGAGCTACATCCAACAGCAACAAATCCTGCAACTTG 2338 Query 281738 TCA------TCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAACA 281791 | ||| | |||| | | ||| || ||||| | || ||| ||||| || ||| Sbjct 2337 GAAGATGACTCACT---ACCACCCAAAATTGCAGCTTGCACAGTAGCTCCATAAGCCACA 2281 Query 281792 GCTTCATCAGGATTAACAGTTTCATTTAGTTTTTTACCATTGAAAAAATTTGAAAGAAGT 281851 ||||| || ||||||| | | | | ||| ||||||||||| | | | Sbjct 2280 GCTTCGTCTGGATTAATCGACTTGAACAACTCTTTCCCATTGAAAAAGTCCATCAACAAC 2221 Query 281852 TGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTGTGAT 281911 || || || ||||| |||| || || ||||| || |||| ||||| |||||| Sbjct 2220 TGCTGCACTTTTGGAATTCGAGTCGAACCACCAACCAACACAACTTCATTCACCTGACTC 2161 Query 281912 TTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCT--CTAAACA 281969 || ||| || | || ||| |||| |||||||||| | | || | ||| | Sbjct 2160 TTGGACAGCTTGGCGTCGCGTAACACTTGAGCAACGGGTTCCAT--CGTCTTGCGAAAGA 2103 Query 281970 AGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAAGAGTGACATTATAATCAATTCCTT 282029 | | ||| ||||| |||||| |||| |||| || ||| ||||||| |||| Sbjct 2102 AACTTCCACACAGTTCCTCGAATCGCGCTCGGGTAATCGTCGAGTTAAAATCAATACCTT 2043 Query 282030 CGAACAAAGAATCAACTTCAATCGTA-GTTTGAGTCGAAGAAGATAGTGCACGTTTAGCA 282088 | ||| | ||| | ||||| ||| | ||||| ||||| ||||| | || || || Sbjct 2042 CATACAGCGTATCGATCTCAAT-GTACGCTTGAGCCGAAGCAGATAAAGTTCGCTTTGCT 1984 Query 282089 CGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATT--CAAATCTGTTT 282146 || ||||| ||||| | || | ||| | || ||||| | | || |||| | Sbjct 1983 CGCTCACAAGCTGTGCGAAGGCGTCGAAGCGCAC--GCTGACTTGTCGCCATATCTTTAC 1926 Query 282147 TATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAATCTTCAC 282206 ||||| | ||| || || | ||| | | ||||| |||| ||||||||||||| Sbjct 1925 GGTATTTGCGCTTAAACTCCGCCACAAAGTACTCCACAAGTTGATTGTCAAAATCTTCAC 1866 Query 282207 CTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCAAGAGACA 282266 |||||| | || | || | ||| ||| | |||| || | || || |||| | || Sbjct 1865 CTCCCAGATGTGTGTCACCAGCCGTGGCTTTCACTTCAAAGATGCCGTCCTCAATACTCA 1806 Query 282267 AAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGT 282326 | || | |||||| || || ||||| | |||||| || || ||||| |||| Sbjct 1805 ATAGCGACACATCAAACGTACCGCCACCAAGATCAAAGATCAGCACATTGTGTTCTCCAC 1746 Query 282327 CTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCA 282386 | | || | || | ||| || || | |||||||||||||| || ||||| || | | Sbjct 1745 CCT---TTCTGTCCAAACCGTAGGCGATCGCAGCAGCAGTTGGCTCGTTAATGATACGTA 1689 Query 282387 AAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAA 282446 || || || |||||||| ||| |||||||| || || || | || || || || | Sbjct 1688 GCACGTTCAGTCCAGCAATCACTCCAGCATCTTTCGTTGCCTGACGCTGCGAGTCATTGA 1629 Query 282447 AATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTG 282506 |||| |||||||| || | ||||||| | |||| ||| ||||| ||||| ||| Sbjct 1628 AATAAGCAGGAACCGTCACCACGGCATTCTTCACTTGTTTCCCAATGTAAGCCTCTGCAA 1569 Query 282507 TTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAGAATATTGCTTGG--A 282564 | | ||||||| | || | ||| || ||||| | ||| || | || ||| | Sbjct 1568 TCTCGCGCATTTTAATCAACACCATGGACGAAATCTCTTCCGGTTGAAATGTCTTCGTCT 1509 Query 282565 TTCATTTTGATATGATACTTCAAAATATGGTTTATTACCA---ACATTAATAACTTTAAA 282621 || ||| ||| || || | | | || || ||| || || |||||||||| Sbjct 1508 CTCCTTTCGAT-TG-CACCACTACTTGAGGCTTGTTATCAGGGCCACGCGTAACTTTAAA 1451 Query 282622 TGGCCAATATTTCATATCTGATTGAACACTTTG-GTCATTAAAATCTCTACCAATTAATC 282680 ||||||| || || || || || || || || ||| | || | | || || || | Sbjct 1450 CGGCCAATGCTTAATGTCCGACTGCAC-CTCTGTGTCCGTGAATTTACGTCCGATCAAAC 1392 Query 282681 GTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATATTTGGCTGCATCTC 282740 |||| ||||||| | ||||| | || | || |||| | || || ||||| | Sbjct 1391 GTTTGACATCAAAGACCGTATTATGCGCGTTCATGGCCACTTGGTTCTTAGCAGCATCAC 1332 Query 282741 CAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTGCGATTACCTTGAT 282800 |||| ||| | || || || || || | ||||| || || || || ||||| || || | Sbjct 1331 CAATTAGACGCTCCGTGTCCGTGAACGCCACATACGACGGCGTGGTACGATTGCCCTGGT 1272 Query 282801 CATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAACTAAAAGTTGTTC 282860 |||| |||||||| || || | |||| ||||| ||||| || || | || || | Sbjct 1271 CATTGGCAATAATCTCCACGCGATCATTCTGCCACACACCAACGCATGAGTACGTCGTAC 1212 Query 282861 CTAAATCAATACCAA 282875 | || ||||| |||| Sbjct 1211 CCAAGTCAATCCCAA 1197 >seq14357 Length=991 Score = 226 bits (250), Expect = 2e-53 Identities = 576/873 (66%), Gaps = 15/873 (2%) Strand=Plus/Plus Query 282020 TCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGATAGTGCA 282079 || || ||||| |||||||||||| || || || || |||| | || || || | Sbjct 7 TCGATACCTTCATACAAAGAATCAATCTCTATAGTTGTCTGAGCAGTGGATGAAAGAGTC 66 Query 282080 CGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTAAGGCTTTTGCTGATTGATTCAAA 282139 | || || | |||||| || ||||| | ||||| || || | || | | | | Sbjct 67 CTCTTGGCCCTTTCACACGCGGTCCTCAATCTTCTCAAAGCCCTAGCACTACCACTAATA 126 Query 282140 TCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACAAGACGATTATCAAAA 282199 || | || | || || || || || | ||| | | || | | |||||||||| Sbjct 127 TCCTTCTTGAACTTCCTTTTAAATTCCTGTACAAAGTGGTTAACCATCCTATTATCAAAA 186 Query 282200 TCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGTCCATCTTCA 282259 |||||||| |||| | || | || | |||| | |||| |||| || |||||| Sbjct 187 TCTTCACCACCCAGATGGGTGTCACCAGCTGTAGACTTCACTTCAAAAATACCCTCTTCA 246 Query 282260 AGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGTACATTCATT 282319 | || |||||| | ||||||| ||||||||||||| ||| || || | |||||| || Sbjct 247 ATAGTCAAAAGTGAAACATCAAATGTTCCACCACCCAAATCGAAGATCAATACATT--TT 304 Query 282320 TCTT--------TGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTT 282371 ||| || | || || || | |||||| |||| |||||||||||| || | Sbjct 305 TCTCACCCACACTGCCAGCCTTCTTGTCCAAACCATAGGCAATAGCAGCAGCAGTAGGCT 364 Query 282372 CATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTC 282431 |||| || ||||||| ||||| | |||||||| ||| ||||| || || || || | Sbjct 365 CATTGATTATTCTCATCACATTCAACCCAGCAATCACTCCAGCATCCTTGGTAGCCTGCC 424 Query 282432 TTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAA 282491 | || || || || ||||||||||||||||| | |||||||| ||| | |||| Sbjct 425 TCTGGGAGTCATTGAAATATGCAGGAACAGTGACAACGGCATTCTTTATTGTGACACCAA 484 Query 282492 TATAAGCGCTTGCTGTTTGTTTCATTTTACTTAAAATCATTGATGAAATTTGTTCTGGAG 282551 ||||| ||| | | |||| || |||| | ||| |||||||| | |||| || Sbjct 485 GGTAAGCCTCTGCAATCTCCCTCATCTTCATTAACACCATGGATGAAATCTCCTCTGCAG 544 Query 282552 AATATTGCTTGGATTC-ATTTTGATATGATACTTCAAAATATGGTTTATTACCA---ACA 282607 | ||||| || |||| || | || ||| || || | || | Sbjct 545 CGAACTGCTTCTCCTCGCCTTTGTAATTA-ACAACAATCATGGGCTTGTCGGCAGGCCCC 603 Query 282608 TTAATAACTTTAAATGGCCAATATTTCATATCTGATTGAACACTTTGGTCATTAAAATCT 282667 ||| | ||||| ||||| | || || || |||||| | |||| | ||| Sbjct 604 GGAATTAACTTAAAAGGCCACAACTTGATGTCACTCTGAACAGTAGTGTCACTGAAACGC 663 Query 282668 CTACCAATTAATCGTTTTGCATCAAAAATAGTATTGGTTGGATTAACTGCAGCTTGATAT 282727 || ||||| |||| || |||||||||| |||||||| ||||| | || | |||| Sbjct 664 CTTCCAATCAATCTCTTGGCATCAAAAACGGTATTGGTAGGATTCATGGCGACCTGATTC 723 Query 282728 TTGGCTGCATCTCCAATCAGATGTTCTGTCTCTGTAAATGAAACATATGATGGAGTTGTG 282787 || || || |||||||| || | || || || || || | ||||| || ||||| || Sbjct 724 TTTGCGGCGTCTCCAATGAGTCGCTCAGTATCAGTGAAAGCCACATAGGAGGGAGTGGTC 783 Query 282788 CGATTACCTTGATCATTCGCAATAATTTCAACTTTACCATTTTGCCATACACCTACACAA 282847 | || ||||| ||||| || || || || ||| | ||| ||||| || || || || Sbjct 784 CTGTTCCCTTGGTCATTGGCGATGATCTCCACTCTGTCATGCTGCCACACCCCAACGCAG 843 Query 282848 CTAAAAGTTGTTCCTAAATCAATACCAATAGCA 282880 | | || || || | ||| ||||| || ||| Sbjct 844 GAATACGTGGTACCGAGATCTATACCGATCGCA 876 >seq11257 Length=1275 Score = 131 bits (144), Expect = 1e-24 Identities = 380/578 (66%), Gaps = 8/578 (1%) Strand=Plus/Plus Query 281432 ACATTAAGAATACCATTGGCATCCAAATCAAATGTGACTTCAATTTGAGGGACCCCTCTC 281491 ||||| | |||||||||||||| | ||||| ||| |||||||| || ||||| Sbjct 675 ACATTCAAGATACCATTGGCATCAATGTCAAAGCACACTGTGATTTGAGGAACACCTCTG 734 Query 281492 TGAGCAGGTGGGATCCCTTCCAAATTAAATGTTCCCAGATTATTATTATCTTTAGTGAAT 281551 ||||||||||||| || ||| | ||| | |||| ||| || ||| | || | Sbjct 735 GGAGCAGGTGGGATACCAGACAATTCAAACTTGCCCAACAAATTGTTGTCTCTTGTTCGT 794 Query 281552 TTTCGTTCACCCTCGAAAATTTGGATAGTAACTACAGTTTGATTATCTGAATAAGTTGTA 281611 ||| ||||| || | | ||| || ||| | | || || || || || || | Sbjct 795 GTTCTCTCACCTTCATACACTTGAATGAGAACACCGGGCTGGTTGTCCGAGTATGTAGAG 854 Query 281612 AATACTCTG-GATTTTTTACAAGGAATTGTTGTGTTTCTATCAATAATATTGGTCATAAT 281670 || || ||| ||| || |||||| || || |||||| ||| | | ||||||| Sbjct 855 AAGAC-CTGCTCTTTCTTTGTAGGAATGGTAGTATTTCTAGGAATCAAAACAGTCATAAC 913 Query 281671 ACCACCAGCTGTTTCTAAACCAAGAGAAAGAGGAGTGACATCAACTAGGACAATATTTTG 281730 ||| || ||||| || | |||||| || |||||| || |||| || | | | ||| Sbjct 914 ACCGCCTGCTGTCTCCAGACCAAGGGAGAGAGGATATACGTCAAGAAGTAACAGGTCTTG 973 Query 281731 AAGTTTTTCATCAGTTTGACCAACAAGAATAGCTGCTTGAATAGCAGCACCATATGCAAC 281790 || || |||| || || |||||||| || || | ||||||||||| ||||| Sbjct 974 AACCTTCTCATTGCCTTCTCCGCTTAGAATAGCAGCCTGCACTGCAGCACCATAGGCAAC 1033 Query 281791 AGCTTCATCAGGATTAA--CAGTTTCATTTAGTTTTTTACCATTGAAAAAAT-TTGAAAG 281847 ||| ||||| || |||| | || || || | ||| ||||| || || | || || Sbjct 1034 AGCCTCATCGGGGTTAATGCTCTTGCA--GAGCTCTTTCCCATTAAAGAAGTCCTGCAAC 1091 Query 281848 AAGTTGTCTTACCTTAGGAATACGAGATGATCCTCCAACTAATACAATTTCATGCACCTG 281907 || ||| || || ||||| | || || || ||||| || |||| ||||| | Sbjct 1092 AA-CTGTTGCACTTTGGGAATTCTAGTAGACCCACCAACCAAAACAACATCATGGATAGA 1150 Query 281908 TGATTTATCCAGTTTTGAATCCAATAAAACTTTTTCAACGGGTTCAAGACCAGCTCTAAA 281967 |||||||| || | ||| ||| |||||||| || || | || ||| || Sbjct 1151 GCTTTTATCCATCTTAGCATCTCTCAAACACTTTTCAACAGGCTCCATACACTTTCTGAA 1210 Query 281968 CAAGTCTGAACAAAGTTCTTCGAATTTAGCTCTAGTAA 282005 | || | | ||||||||| |||||||||||| Sbjct 1211 TAGATCCATATTCAATTCTTCGAACCTAGCTCTAGTAA 1248 >seq16146 Length=868 Score = 123 bits (136), Expect = 2e-22 Identities = 141/188 (75%), Gaps = 6/188 (3%) Strand=Plus/Minus Query 282284 GTTCCACCACCCATATCAAAAATAAGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGA 282343 || |||||||| | |||||| | ||||| | |||| || | | | || |||| Sbjct 456 GTCCCACCACCAAGATCAAACACAAGTA---TTGTTTCATTATTCT---TCTTCTCAAAC 403 Query 282344 CCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCA 282403 ||||| || || | ||||||||| ||||||||||||||||||| || | | |||||| Sbjct 402 CCATAGGCCAATGAAGCAGCAGTGGGTTCATTAATAATTCTCAGGACTTCCAAGCCAGCA 343 Query 282404 ATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTA 282463 || | |||||||| || |||||| ||| || ||||| || ||||||||||||||||| Sbjct 342 ATCCGGCCTGCATCCTTTGTGGCTGTTCTCTGAGAATCATTGAAATATGCAGGAACAGTT 283 Query 282464 ATAACGGC 282471 || || || Sbjct 282 ATCACAGC 275 >seq1324 Length=7794 Score = 123 bits (136), Expect = 2e-22 Identities = 140/188 (74%), Gaps = 0/188 (0%) Strand=Plus/Minus Query 282332 TTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTTGGTTCATTAATAATTCTCAAAACA 282391 ||||| || | ||| |||||| ||||||||||||||||| ||||| || | ||| Sbjct 6377 TTTTTGTCCATACCGAACGCAAGTGCAGCAGCAGTTGGTTCGTTAATGATACGTTTAACG 6318 Query 282392 TTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCTTGTCTTTGTGAATCGTTAAAATAT 282451 | | |||||| ||| | || ||||||||||| ||||| | ||| | ||||||||| || Sbjct 6317 TCTAAACCAGCGATTTTACCCGCATCTTTAGTTGCTTGACGTTGAGCATCGTTAAAGTAA 6258 Query 282452 GCAGGAACAGTAATAACGGCATCTGTTACTTCTTTTCCAATATAAGCGCTTGCTGTTTGT 282511 |||||||| |||||||| || ||||| ||| || || | ||| | ||| |||| Sbjct 6257 GCAGGAACTGTAATAACTGCTTCTGTAACTGTTTCACCTAAATAGTCTTCTGCAGTTTTC 6198 Query 282512 TTCATTTT 282519 ||||| || Sbjct 6197 TTCATCTT 6190 Score = 89.7 bits (98), Expect = 4e-12 Identities = 101/134 (75%), Gaps = 6/134 (4%) Strand=Plus/Minus Query 86118 ACCGTATGCAAGAGCTGCTGCAGTTGGTTCATTAATTAT---TTTAAGAACATCTAAACC 86174 |||| | ||||| || || ||||||||||| ||||| || ||||| | |||||||| Sbjct 6366 ACCGAACGCAAGTGCAGCAGCAGTTGGTTCGTTAATGATACGTTTAA---CGTCTAAACC 6310 Query 86175 CGCAATTTTAGCAGAATCAAGAGTTGCTTGTCTCTGTGCGTCATTAAAATATGCTGGTAC 86234 || |||||| | | ||| ||||||||| | || || || ||||| || || || || Sbjct 6309 AGCGATTTTACCCGCATCTTTAGTTGCTTGACGTTGAGCATCGTTAAAGTAAGCAGGAAC 6250 Query 86235 AGTAATAACTGCTT 86248 ||||||||||||| Sbjct 6249 TGTAATAACTGCTT 6236 >seq6757 Length=2099 Score = 105 bits (116), Expect = 5e-17 Identities = 320/491 (65%), Gaps = 15/491 (3%) Strand=Plus/Plus Query 282014 TTATAATCAATTCCTTCGAACAAAGAATCAACTTCAATCGTAGTTTGAGTCGAAGAAGAT 282073 ||| | ||||| || |||||||| ||||| | ||||| || ||||| || ||||| Sbjct 499 TTAAAGTCAATACCATCGAACAACGAATCGATCTCAATGTAAGCTTGAGCGGACGAAGAC 558 Query 282074 AGTGCACGTTTAGCACGTTCACATGCTGTCCTTAGTCTTCGTA----AGGCTTTTGCTGA 282129 || | |||||| || || ||||| || |||| ||| | || | | ||| | || Sbjct 559 AGCGTACGTTTCGCGCGCTCACAAGCAGTCCGTAGACGACGGAGAGCACGCTGGTTCTCC 618 Query 282130 TTGATTCAAATCTGTTTTATATTTTCTCTTGAAATCTTCAACACACCATGTTACA--AGA 282187 |||| || | | || | |||||| || | || | || | || ||| Sbjct 619 GTGATG----TCCTTGCGGTGCTTGCGCTTGAACTCCTGGACGAAG--TGGTCCACCAGA 672 Query 282188 CGATTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAA 282247 || || || ||||||||||| ||||| | || | || | || || | || | || Sbjct 673 CGGTTGTCGAAATCTTCACCGCCCAAGTGCGTGTCACCAGCAGTGGCCTTCACCTCAAAG 732 Query 282248 AGTCCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATA 282307 | || ||||| | || || | ||||| ||| |||||||| | ||||| || Sbjct 733 ATGCCTTCTTCGATGCTCAGTAGCGATACATCGAAGGTACCACCACCAAGGTCAAAGATC 792 Query 282308 AGTACATTCATTTCTTTGTCTTGGTTTTTATCAAGACCATACGCAAAAGCAGCAGCAGTT 282367 || || || || | | || || || | ||| || |||| ||||||||| || Sbjct 793 AGCACGTTGCGCTC---GCCGCCCTTCTTGTCCAAACCGTAAGCAATAGCAGCAGCCGTC 849 Query 282368 GGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTGGCT 282427 || || || || || | || ||||| || ||||| || ||||| || || |||||| Sbjct 850 GGCTCGTTGATGATACGCAGCACATTCAGCCCAGCGATAGCACCTGCGTCCTTTGTGGCT 909 Query 282428 TGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCATCTGTTACTTCTTTT 282487 || | || || ||||| || || || || || || || ||||||| | |||||||| Sbjct 910 TGACGCTGCGAGTCGTTGAAGTACGCTGGTACCGTGATCACGGCATTCTTCACTTCTTTG 969 Query 282488 CCAATATAAGC 282498 || ||| |||| Sbjct 970 CCGATAAAAGC 980 >seq8376 Length=1716 Score = 104 bits (114), Expect = 2e-16 Identities = 197/289 (68%), Gaps = 6/289 (2%) Strand=Plus/Plus Query 282191 TTATCAAAATCTTCACCTCCCAATTTAGTATTTCCTGACGTAGCTCTTACTTGGAAAAGT 282250 || ||||| || |||||||| | | ||| | || | || || | || | ||| | Sbjct 923 TTGTCAAAGTCCTCACCTCCAAGGTGAGTGTCCCCAGCGGTTGCCTTCACCTCGAAGATA 982 Query 282251 CCATCTTCAAGAGACAAAAGAGTAACATCATGGGTTCCACCACCCATATCAAAAATAAGT 282310 || || || | | || |||| |||||| ||| |||||||| | ||||| || | Sbjct 983 CCTTCCTCGATGGTCAGCAGAGACACATCAAAGGTACCACCACCAAGGTCAAAGATCAAC 1042 Query 282311 ACATTCATTTCTTTGTCT----TGG--TTTTTATCAAGACCATACGCAAAAGCAGCAGCA 282364 |||||| | || | | ||| || || ||||||||||| |||| || ||||| Sbjct 1043 ACATTCTTCTCACCGACGCTGGTGGCCTTCTTGTCAAGACCATAGGCAATGGCCGCAGCG 1102 Query 282365 GTTGGTTCATTAATAATTCTCAAAACATTAAGACCAGCAATTCTTCCTGCATCTTTAGTG 282424 || |||||||| || || | || || || |||||||| || || ||||| || ||| Sbjct 1103 GTGGGTTCATTGATGATGCGCATCACGTTCAGACCAGCGATGACCCCGGCATCCTTGGTG 1162 Query 282425 GCTTGTCTTTGTGAATCGTTAAAATATGCAGGAACAGTAATAACGGCAT 282473 || || || || || || || || || |||||||| || | ||| |||| Sbjct 1163 GCCTGCCTCTGGGAGTCATTGAAGTAAGCAGGAACCGTGACAACAGCAT 1211 >seq806 Length=11115 Score = 98.7 bits (108), Expect = 7e-15 Identities = 124/166 (75%), Gaps = 6/166 (4%) Strand=Plus/Plus Query 1168482 TATGATGCCAGCATGATGTCGGTCTTAAAACGTGCACGCTGTTCTGTCGATAAGGCCAAC 1168541 || ||||| | |||||||| || || ||| ||||| |||||||| || ||||| ||| Sbjct 5216 TACGATGCAGGAATGATGTCTGTATTGAAAAAAGCACGTTGTTCTGTAGACAAGGCTAAC 5275 Query 1168542 TTTGAATGTTCAATTGCTGGCGAATAAT-CTGATTTTTAAAGCAAAAAGCTTAGAGT--G 1168598 |||||||||||||| |||| ||||||| || ||| || || ||||| |||| | | Sbjct 5276 TTTGAATGTTCAATGCCTGGTGAATAATCCTCATTATT--TTCAGAAAGCCTAGACTTAG 5333 Query 1168599 ATCTAGGCtttttttATGGCTGAACCAGGTCAGATCTGCCATTGTG 1168644 |||||||||||| | | | | | |||| |||||||||||| Sbjct 5334 TTCTAGGCTTTTTGTTTTG-TATATGCTGTCAATTCTGCCATTGTG 5378 >seq250 Length=21463 Score = 96.9 bits (106), Expect = 3e-14 Identities = 92/118 (78%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 432282 TTGAGAGGTAAAGAAGGTCGTATTAGAGGAAATTTGATGGGAAAGCGTGTCGATATGTCT 432341 ||| | || ||||||||||| ||| | || || ||||||| |||||||||||| | || Sbjct 9992 TTGCGTGGCAAAGAAGGTCGCATTCGTGGCAACCTGATGGGCAAGCGTGTCGATTTTTCG 9933 Query 432342 GCACGTACAGTTATTACTTCTGATCCTAATATTGCTCTCAATGAAGTTGGTGTTCCTC 432399 || ||||| || ||||| |||| ||||| ||||| || || |||| ||||| |||| Sbjct 9932 GCGCGTACGGTCATTACCGCTGACCCTAACATTGCCATCGATCAAGTCGGTGTGCCTC 9875 >seq5137 Length=2679 Score = 89.7 bits (98), Expect = 4e-12 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 1048029 CCAAAATCGGCAATTTTGACATTCCAATTTTCATCGATGAGAATATTTGATGGCTTAATG 1048088 ||||| |||| | || |||||| || ||| |||| | ||||| | | |||||||| ||| Sbjct 2655 CCAAAGTCGGACAATTGGACATTGCACTTTGCATCCACGAGAAAACTCGATGGCTTGATG 2596 Query 1048089 TCACGATGAATAATCGGAGGATCGAAACTGTGAAGATAA 1048127 |||||||| | || ||||| ||||||||||||||||| Sbjct 2595 TCACGATGGACAAATGGAGGCACGAAACTGTGAAGATAA 2557 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 3738885585287814