Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_025414.1 Length=178171 Score E Sequences producing significant alignments: (Bits) Value seq16087 89.7 6e-13 >seq16087 Length=871 Score = 89.7 bits (98), Expect = 6e-13 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Minus Query 51018 GTTGAAGGTGGACAGCACCTAAACGTGAATGTGCTACGTCGCGAAACCCTGAAAGATGCT 51077 ||||||||||| |||||||| ||||| || ||||| ||||||||||| |||| || || Sbjct 104 GTTGAAGGTGGTCAGCACCTGAACGTTAACGTGCTGCGTCGCGAAACGCTGATGGACGCC 45 Query 51078 GTGAAACATCCTGAGAAGTACCCACAGTTAACGATCCGCGTTTC 51121 || | || ||||| || ||||||||| | || || || || || Sbjct 44 GTTGAGCACCCTGAAAAATACCCACAGCTGACCATTCGTGTGTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 569765976095640