Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_025830.1 Length=120938 Score E Sequences producing significant alignments: (Bits) Value seq29522 141 7e-29 seq16087 98.7 8e-16 >seq29522 Length=371 Score = 141 bits (156), Expect = 7e-29 Identities = 80/81 (99%), Gaps = 0/81 (0%) Strand=Plus/Minus Query 9581 ATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCACCTGCTCTA 9640 |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| Sbjct 280 ATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTA 221 Query 9641 ACCACTGAGCTAAGGGGCCGT 9661 ||||||||||||||||||||| Sbjct 220 ACCACTGAGCTAAGGGGCCGT 200 >seq16087 Length=871 Score = 98.7 bits (108), Expect = 8e-16 Identities = 80/97 (82%), Gaps = 0/97 (0%) Strand=Plus/Minus Query 109107 GTGGTCAACATCTGAACGTTAACGTTCTGCGTCGGGAAACTCTGGAAGATGCAGTTAAGC 109166 ||||||| || |||||||||||||| |||||||| ||||| ||| || || ||| ||| Sbjct 97 GTGGTCAGCACCTGAACGTTAACGTGCTGCGTCGCGAAACGCTGATGGACGCCGTTGAGC 38 Query 109167 ATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATC 109203 | || |||||||| || ||||||||||| ||||| || Sbjct 37 ACCCTGAAAAATACCCACAGCTGACCATTCGTGTGTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 386709231447121