Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq451 84.2 2e-11 >seq451 Length=16219 Score = 84.2 bits (92), Expect = 2e-11 Identities = 127/178 (71%), Gaps = 2/178 (1%) Strand=Plus/Plus Query 136677 CAGATAGTACATGCCCGTCTTTAAACCCTTCTCCCAGGAATAATTATGTATAGATGACAA 136736 || |||||||||||||||||| | ||||| | ||| | ||| ||| ||||||| | Sbjct 7630 CATATAGTACATGCCCGTCTTGAGGCCCTTTTTCCATGCATAGAAATGCATAGATGTGAG 7689 Query 136737 AAT-TTTATAGCTCGGATCGGCCACGAAAAGATTTAGCGATTGGCTCTGATCGATGTAAG 136795 | | || | |||||||||| | | || ||| |||||||| ||||| ||||||| Sbjct 7690 TTTACTGATCG-TCGGATCGGCAATGTGAATATTGAGCGATTGACTCTGGCAAATGTAAG 7748 Query 136796 GTCCGCGGTCTGCGGCCATGTTCAATAGTACTTTTTGCTTAATTTCCCAAGCGGTTTT 136853 || || || || | ||||| ||| | |||||||| |||||||| |||| || Sbjct 7749 CGCCACGATCAGCCGACATGTCCAAGACCGACTTTTGCTTGATTTCCCACACGGTCTT 7806 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444896672376480