Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_027339.1 Length=38389 Score E Sequences producing significant alignments: (Bits) Value seq7874 89.7 1e-13 >seq7874 Length=1827 Score = 89.7 bits (98), Expect = 1e-13 Identities = 181/269 (67%), Gaps = 0/269 (0%) Strand=Plus/Minus Query 10463 GCTGCTGAGTTTGCTGCAAAGATGCAGGATGCTACCGGAACGGCGTCAGAAGACATGATG 10522 || || ||||| || || ||||||||||| ||||| | || | | |||||| | Sbjct 1527 GCCGCCGAGTTCGCAGCCAAGATGCAGGACGCTACGCGCACCACTGAGGGCGACATGCTC 1468 Query 10523 GGGCTGTTCGACACTATCCAGAAGGCGTTTTATCTGGGCGTGGACGATACCAACATGTTG 10582 || || | ||||| |||||| | ||||||| |||||||||||| ||||||| || Sbjct 1467 GGACTCATGGACACGATCCAGCGGACGTTTTACCTGGGCGTGGACAGCGGCAACATGCTG 1408 Query 10583 TCCTTCTTCACTAAAACCAGCTCTGTTCTGAAGATGGTGAACAAGGACGGTCTTCAGGCT 10642 |||||| |||| | | || || || |||| ||||| || || |||| Sbjct 1407 CAGGGCTTCACCAAAATGTCCCCGGTGATGGGCATCCTGAAAAAGGAAGGGCTGGAGGCA 1348 Query 10643 GCACAGAGCCTTGCCCCCATCAGCGTCATGATGGATCAGATGGGGATGAACGGGGAGTCG 10702 | | | || ||||| | || |||||||| |||| || ||| ||| |||||| Sbjct 1347 TCCAACATGCTGGCCCCGCTGCTGGTGATGATGGACCAGACCGGCATGGCCGGCGAGTCG 1288 Query 10703 GCAGGTAACGCCCTGCGAAAAGTTATCCA 10731 || || |||||| | || || || |||| Sbjct 1287 GCGGGCAACGCCATCCGCAAGGTGTTCCA 1259 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 122671407664818