Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_027349.1 Length=166977 Score E Sequences producing significant alignments: (Bits) Value seq16087 105 7e-18 >seq16087 Length=871 Score = 105 bits (116), Expect = 7e-18 Identities = 85/103 (83%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 60780 GATACACGGATGGTCAGCTGCGGATATTTTTCCGGATGCTTAACTGCATCTTCCAGAGTT 60839 || ||||| ||||||||||| || |||||||| || |||| ||| || || ||| ||| Sbjct 1 GACACACGAATGGTCAGCTGTGGGTATTTTTCAGGGTGCTCAACGGCGTCCATCAGCGTT 60 Query 60840 TCACGACGCAGAACGTTTACGTTCAGGTGTTGACCACCCTCAA 60882 || |||||||| ||||| ||||||||||| |||||||| |||| Sbjct 61 TCGCGACGCAGCACGTTAACGTTCAGGTGCTGACCACCTTCAA 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 533961089038280