Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_027364.1 Length=348113 Score E Sequences producing significant alignments: (Bits) Value seq10753 111 4e-19 seq7046 111 4e-19 >seq10753 Length=1336 Score = 111 bits (122), Expect = 4e-19 Identities = 78/89 (88%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 210916 GATTTTGGCGGTGAAGGTGAGATTTGAACTCACGGAGGACTTTCGCCCTCGACGGTTTTC 210975 || |||||||| ||||||||| |||||||||||||||| | |||||| |||||||| Sbjct 681 GAATTTGGCGGAAGCGGTGAGATTCGAACTCACGGAGGACTCACACCCTCGTCGGTTTTC 622 Query 210976 AAGACCGTTGCATTAAACCGCTCTGCCAC 211004 ||||||| ||||||||||||||||||||| Sbjct 621 AAGACCGGTGCATTAAACCGCTCTGCCAC 593 >seq7046 Length=2020 Score = 111 bits (122), Expect = 4e-19 Identities = 78/89 (88%), Gaps = 0/89 (0%) Strand=Plus/Minus Query 210916 GATTTTGGCGGTGAAGGTGAGATTTGAACTCACGGAGGACTTTCGCCCTCGACGGTTTTC 210975 || |||||||| ||||||||| |||||||||||||||| | |||||| |||||||| Sbjct 767 GAATTTGGCGGAAGCGGTGAGATTCGAACTCACGGAGGACTCACACCCTCGTCGGTTTTC 708 Query 210976 AAGACCGTTGCATTAAACCGCTCTGCCAC 211004 ||||||| ||||||||||||||||||||| Sbjct 707 AAGACCGGTGCATTAAACCGCTCTGCCAC 679 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1113323224636872