Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_027925.1 Length=496396 Score E Sequences producing significant alignments: (Bits) Value seq195 93.3 1e-13 >seq195 Length=24554 Score = 93.3 bits (102), Expect = 1e-13 Identities = 102/135 (76%), Gaps = 3/135 (2%) Strand=Plus/Plus Query 443763 CTCCATCTTCTGGTTGAAAAAGCGTGGACTTATGCACGGTCTGACCTTTAGTAACGAACT 443822 ||||||||||||| |||| || ||||| || |||| ||||| | |||| || || || Sbjct 23193 CTCCATCTTCTGGCTGAAGAAACGTGGTCTCATGCCTGGTCTCAGCTTTTCGAATGAGCT 23252 Query 443823 GATCAGTCGGGACGAGGGTTTGCATTGCGACTTCGCCTGTCTTCTCTACACCAAACACAT 443882 |||||||| || |||||| ||||| |||||| ||||| || | ||| |||||| | Sbjct 23253 TATCAGTCGTGATGAGGGTATGCATACCGACTTTGCCTGCCTCATGTACTCCAAAC---T 23309 Query 443883 CGTGCACAAGCTGCC 443897 || | |||||||| Sbjct 23310 GGTCAATAAGCTGCC 23324 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1587612761625855