Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_028108.1 Length=171454 Score E Sequences producing significant alignments: (Bits) Value seq451 197 2e-45 seq195 183 3e-41 seq5797 125 8e-24 seq1997 120 3e-22 seq5920 104 3e-17 seq7623 98.7 1e-15 seq1567 87.8 2e-12 >seq451 Length=16219 Score = 197 bits (218), Expect = 2e-45 Identities = 660/1016 (65%), Gaps = 42/1016 (4%) Strand=Plus/Minus Query 19823 TACAAGGACGCCGCGAACGCCAAGTCAAATCAGAAGAACATCGGCGCGATCAAGTCGTCC 19882 ||||||||||| || || ||||| |||||| |||| | ||| ||||| || Sbjct 8628 TACAAGGACGCGGCCAATCGTAAGTCCAATCAGCAGAATCTTGGCACGATCCGATCCAGT 8569 Query 19883 AACCTGTGTACTGAAATCATGGAGGTTTCCAAG---CCGGACGAGACTGCCGTGTGTAAT 19939 ||| |||| ||| | |||||| | || | ||||||||| ||| ||||| || Sbjct 8568 AACTTGTGCTGTGAGGTGATGGAG---TACACGTCTCCGGACGAGGTTGCGGTGTGCAAC 8512 Query 19940 CTGGCGTCCCTGTGCCTGCCGACTTTCGTCAAGGCCTCCTCCTTCGACTTTGCCAAATTG 19999 ||||||| || ||||| | || || | | | ||| ||| ||||||| Sbjct 8511 TTGGCGTCAGTGGCGCTGCCCAAGTTTGTGGAAGACGGTGTGTTCAACTA---CAAATTG 8455 Query 20000 ---TACGAGGTGACCCGGGTCGTCACGCGTAATCTGAATCGCGTCATCGATCGGAACTTT 20056 ||||| |||||| ||||||||| || || || || ||||| || |||| Sbjct 8454 CTGTACGACGTGACCAAGGTCGTCACCCGCAACCTCAACAAAGTCATTGACGTCAACTAC 8395 Query 20057 TACCCGACCGAGGCGGCGCGCAAGTCGAATATGCGCCACCGGCCGATCGCGATCGGCGTC 20116 |||||| | | || || || || || |||||||| || || | | || || || Sbjct 8394 TACCCGGTTGCAGAAGCTCGAAAATCCAACATGCGCCATCGTCCCGTGGGAATTGGTGTT 8335 Query 20117 CAGGGCCTGGCCGACG-TTTTCATGATGCTC--GGCCTCT-CATTCGACGATCCCAAGGC 20172 || || |||||||| | ||||| | ||| | || | | || || | |||| Sbjct 8334 CAAGGTCTGGCCGATGCTTTTCTT----CTCATGAACTTTGCGTTTGAAAGTGAAGAGGC 8279 Query 20173 GCGCGAGCTCAACAAGGGCATCTTCGAGGCCGTGTACCACGCGGCCCTCCTGGAATCGTG 20232 || || || |||||| |||||| ||| || | ||| |||| | | | || Sbjct 8278 TCGTGAACTGAACAAGAACATCTTTGAGACCATCTACTACGCTTCGATGGAGACTTCTAT 8219 Query 20233 CGAACTCGCCAAAGAGGACGGCCCGTACGAGACGTTCAAGGGGTCGCCCGCGTCCGAGGG 20292 || | ||||| || || ||||||||||||||| |||| || || || | |||| Sbjct 8218 GGAGATTGCCAAGGAACTGGGTCCGTACGAGACGTTCCAGGGCTCCCCTGCCAGCAAGGG 8159 Query 20293 TATCCTCCAGCCGGACATGTGGGGCGTCACTGAGAAT----GAGTTT-----TGGAGCGC 20343 ||| |||| ||||||||||| |||||| | | ||| |||| ||| Sbjct 8158 GATCTTCCAATTTGACATGTGGGGTGTCACTCCGTCGTCTGGTCTTTGGGACTGGACCGC 8099 Query 20344 CCTCAAGGT---TGAGATCAAGACCCACGGGCTTCGCAACTCGTTGCTCGTCGCGCCCAT 20400 | | |||| || ||||||| ||||| |||| ||||| ||||| || || || || Sbjct 8098 CTTGAAGGAGAATGTGATCAAG---CACGGTATTCGTAACTCTTTGCTAGTGGCTCCTAT 8042 Query 20401 GCCGACCGCCTCGACCGCCCAGATCATGGGGAACAACGAGGCTTTCGAGCCGTACACGAC 20460 ||| || || || || ||||||||| |||| ||||| || | ||||||||||||| | Sbjct 8041 GCCAACTGCTTCAACTGCCCAGATCCTGGGCAACAATGAATCCATCGAGCCGTACACATC 7982 Query 20461 CAACATCTACTTGCGTCGTACACTGGCCGGTGAGTTCGTCATGGTAAACAAGCACCTGGT 20520 ||||| ||| ||||| ||| || |||||||| || || |||||||| ||| | Sbjct 7981 AAACATGTACAATCGTCGCGTACTCGCTGGTGAGTTTACGATCGTCAACAAGCATCTGAT 7922 Query 20521 CCGCGACTTGCAGAAGATCGATATGTGGTCGCCCAAAATTAAGAATGAAA--TTGTCCGA 20578 || || | | | || ||| |||| || | ||| ||| ||| ||| Sbjct 7921 GAAGGAGCTGATTGATTTGGGCATCTGGACGCCTGAAGTCCGTAATCAAATCTTGAACGA 7862 Query 20579 GCCGGCGGGAGCGTCC---AGGCATTGGATATCCCCCAGAACCTCAAGGACATTTACAGG 20635 ||| || || | ||| | || || | | ||||||| | |||| | Sbjct 7861 --CGGTGGATCGGTGCAAAAGGTCAAGACCATTCCAGACCATATCAAGGAAAAGTACAAG 7804 Query 20636 ACCGTATGGGAAATCCCACAGAAGAGCATCATCGACATGGCGGCCGATCGCGGCGCCTAC 20695 ||||| ||||||||| || ||| || | |||||| |||| ||||| ||||| ||| Sbjct 7803 ACCGTGTGGGAAATCAAGCAAAAGTCGGTCTTGGACATGTCGGCTGATCGTGGCGCTTAC 7744 Query 20696 ATCGACCAGTCCCAGTCGCTCAATGTCTTCATGGAGAATCCGAGCCTGGCGAAGCTGAGC 20755 || |||| || ||||||||| | ||| | |||||| | || || | Sbjct 7743 ATTTGCCAGAGTCAATCGCTCAATATTCACATTGCCGATCCGACGATCAGTAAACTCACA 7684 Query 20756 TCCATGCATATGTACGGCTGGCACAAGGGGCTCAAGACGGGCATGTACTATCTGCG 20811 || |||||| | || | ||| | ||||| ||||||||||||||||||||| |||| Sbjct 7683 TCTATGCATTTCTATGCATGGAAAAAGGGCCTCAAGACGGGCATGTACTATATGCG 7628 Score = 154 bits (170), Expect = 2e-32 Identities = 546/840 (65%), Gaps = 40/840 (5%) Strand=Plus/Plus Query 78193 CGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTGCATACTCGAC 78252 |||| ||||||||||||||||||||| ||||| |||||| | || | |||||| | Sbjct 7628 CGCATATAGTACATGCCCGTCTTGAGGCCCTTTTTCCATGCATAGAAATGCATAGATGTG 7687 Query 78253 AGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTGGTCGATGTAC 78312 || || | |||| | | ||| || |||||||| || |||| ||||| Sbjct 7688 AGTTTACTGATCGTCGGATCGGCAATGTGAATATTGAGCGATTGACTCTGGCAAATGTAA 7747 Query 78313 GCACCGCGGTCGGCCGCCATGTCGATGACCGACTTTTGCGGAATCTCCCAGATGGTCCGG 78372 || || || || |||| |||||| | ||||||||||||| || ||||| | |||| | Sbjct 7748 GCGCCACGATCAGCCGACATGTCCAAGACCGACTTTTGCTTGATTTCCCACACGGTCTTG 7807 Query 78373 TAAATGGCCTTCAGCTCTTCCTGGATG---TCCAGCGCTTGTACGCTCCCACCGGCTCGC 78429 || | |||| | | || | ||| | | | ||| || |||||| | | Sbjct 7808 TACTTTTCCTTGATATGGTCTGGAATGGTCTTGACCTTTTGCACCGATCCACCGTCGTTC 7867 Query 78430 ACAATTTCATTCTTAATTTGAGGGTTCCAGCGATTGATCTTCTGA---AGATCCCGGACC 78486 | |||| ||| | || ||| ||||| || | | | || ||| | | Sbjct 7868 AAGATTTGATTACGGACTTCAGGCGTCCAG---ATGCCCAAATCAATCAGCTCCTTCATC 7924 Query 78487 AGGTGCCGGTTAATCATGACGAACTCGCCGGCCAGGGTCCGGCGCAGGTAGATGTTGGTC 78546 || ||| ||| | || ||||| || || || || || ||| ||||| | Sbjct 7925 AGATGCTTGTTGACGATCGTAAACTCACCAGCGAGTACGCGACGATTGTACATGTTTGAT 7984 Query 78547 GTGTACGGCTCGAAAGCCTCGTTGTTCCCCATGATCTGGGCGGTCGAGGCGGTCGGCATG 78606 ||||||||||||| | || ||||| |||| ||||||||| || || || || ||||| Sbjct 7985 GTGTACGGCTCGATGGATTCATTGTTGCCCAGGATCTGGGCAGTTGAAGCAGTTGGCATA 8044 Query 78607 GGTGCGACCAGTAGAGAATTCCGAAGACCATGCGTCTTGATC---TCGACCTTTAGG--- 78660 || || || || | ||| || |||| ||| || ||||||| | |||| | | Sbjct 8045 GGAGCCACTAGCAAAGAGTTACGAATACCGTG---CTTGATCACATTCTCCTTCAAGGCG 8101 Query 78661 ---CCGTCCCAAAATTCATTCGCC---GCGATCCCCCACATGTCCGGTTGAAGGATACCC 78714 | |||||||| || || | | || ||||||||||| ||| | ||| ||| Sbjct 8102 GTCCAGTCCCAAAGACCAGACGACGGAGTGACACCCCACATGTCAAATTGGAAGATCCCC 8161 Query 78715 TCGGACGCCGGCGACCCCTTGAACGTCTCGTAAGATCCCTCCTCCTTGGCGAGTTCGCAT 78774 | | || || || |||| |||||||||||| | ||| |||||||| | || ||| Sbjct 8162 TTGCTGGCAGGGGAGCCCTGGAACGTCTCGTACGGACCCAGTTCCTTGGCAATCTC-CAT 8220 Query 78775 ----GACTCGAGCAGGGCCGCGTGGTACACAGCCTCGAAGATGCCCTTGTTGAGCTCGCG 78830 | ||| || | |||| ||| | | ||| |||||| |||||| || || || Sbjct 8221 AGAAGTCTC---CATCGAAGCGTAGTAGATGGTCTCAAAGATGTTCTTGTTCAGTTCACG 8277 Query 78831 CGCCT-TGGTCTCGTCGAACG-AAAGGCC--GAGCATCATGAAGACATCGGCCAGGCCCT 78886 |||| | || || |||| |||| | ||| | | ||| |||||||||| || | Sbjct 8278 AGCCTCTTCACT-TTCAAACGCAAAGTTCATGAGAAGAA--AAG-CATCGGCCAGACCTT 8333 Query 78887 GGACGCCGATAGCGATCGGTCGGTGGCGCATGTTGCTCTTTCGGGCCGCCTCGGTCGGGT 78946 | || || || | | || || |||||||||||| ||||| || | | ||||| Sbjct 8334 GAACACCAATTCCCACGGGACGATGGCGCATGTTGGATTTTCGAGCTTCTGCAACCGGGT 8393 Query 78947 AAAAGTTCCGATCGATGACGCGGTTCAGGTTACGCGTGACGACCCGAGTCACCTCGTACA 79006 | |||| || ||||| ||| ||||| || ||||||||| ||||| ||||||| Sbjct 8394 AGTAGTTGACGTCAATGACTTTGTTGAGGTTGCGGGTGACGACCTTGGTCACGTCGTACA 8453 >seq195 Length=24554 Score = 183 bits (202), Expect = 3e-41 Identities = 370/543 (68%), Gaps = 7/543 (1%) Strand=Plus/Plus Query 59593 TGTATAAGAAAGCGATCGGTTCATTCTGGTCCGTCGAGGAGATTGACCTCGCCGGAGACC 59652 |||| |||||||| | || || ||| | | |||||| | || || | ||| Sbjct 22748 TGTACAAGAAAGCTGAGGCCTCGTTTTGGACGGCTGAGGAGCTGGATCTGGTGCACGACA 22807 Query 59653 TGAAGGATTGGGACAAGCTCAATTACGACGAGCAGCATTTCATCAAGATGGTCCTGGCCT 59712 | || |||||| | || |||| | || |||||| || || |||||| || || |||| Sbjct 22808 TTAAAGATTGGAAAAACCTCACTGACAACGAGCGTCACTTTATCAAGCATGTGCTCGCCT 22867 Query 59713 TCTTCGCGGCGAGTGATGGAATTGTGATGGAAAATATAGACATGAACTTTTCCAAGGATG 59772 |||| || || |||||||| ||||||| ||||| | | ||||||||| ||| || | Sbjct 22868 TCTTTGCAGCCAGTGATGGCATTGTGAATGAAAACCTGGCCATGAACTTCAGCAACGAAG 22927 Query 59773 TCCAGATTGCCGAGGCCCGGTCGTTCTACGCGTATCAG-TCGTTCAACGAGTCTATCCAC 59831 | ||| || |||| || |||| ||||||| | |||| | | | | |||| || ||| Sbjct 22928 TGCAGGTTCCCGAAGCTCGGTGTTTCTACGGTTTTCAGATTGCT-ATCGAGAACATTCAC 22986 Query 59832 TCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAAGGCTGGT 59891 || ||| || ||||| | || || | || ||||||| | | |||||||| | Sbjct 22987 TCGGAGGTCTATTCGCTACTCATTGACACGTACATCAAGGACGCTGTAGAGAAGGACCTT 23046 Query 59892 CTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGCCATGCAG 59951 || | |||||||| || || ||| || || | ||||| | ||||| | || Sbjct 23047 TTGCTGCGTGCCATTGACACTATCCCGTGTGTGAAGAAGAAAGCCGCTTGGGCACTCAAG 23106 Query 59952 TGGATGAGTCCTG---GAG-CATCATTTGCACAACGTCTCATAGCTTTTGCATGCGTGGA 60007 ||| || | || | | | | |||| ||| | ||||| | || || || | ||||| Sbjct 23107 TGG-TGTGACCCGCGTGTGTCGTCATACGCAGAGCGTCTTCTTGCGTTCGCCTCAGTGGA 23165 Query 60008 AGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCCTCAT 60067 || ||||||||||||||||| ||||| | || |||||||| || || ||||| ||||| Sbjct 23166 GGGTATCTTCTTCTCTGGCTCCTTCTGCTCCATCTTCTGGCTGAAGAAACGTGGTCTCAT 23225 Query 60068 GCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGGAGTT 60127 ||| || || || || || || ||||| || || || ||||| | ||| || || Sbjct 23226 GCCTGGTCTCAGCTTTTCGAATGAGCTTATCAGTCGTGATGAGGGTATGCATACCGACTT 23285 Query 60128 TGC 60130 ||| Sbjct 23286 TGC 23288 Score = 84.2 bits (92), Expect = 2e-11 Identities = 76/96 (79%), Gaps = 0/96 (0%) Strand=Plus/Plus Query 60330 ATTTACGGCGTGAATAACCCTTTCGACTGGATGGAGACCATCTCGTTGGAAGGGAAGACC 60389 |||||| ||| || ||||| |||||||||||||| | ||||| | | || |||||| Sbjct 23488 ATTTACCACGTCAAGAACCCGTTCGACTGGATGGACATGATCTCACTTCAGGGCAAGACC 23547 Query 60390 AACTTCTTTGAGAAGCGGGTCGGGGATTATTCAAAG 60425 ||||||||||||||||| || || || || || ||| Sbjct 23548 AACTTCTTTGAGAAGCGTGTAGGTGAATACTCCAAG 23583 >seq5797 Length=2401 Score = 125 bits (138), Expect = 8e-24 Identities = 202/287 (70%), Gaps = 9/287 (3%) Strand=Plus/Minus Query 79438 TCGTCGCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCC 79497 ||||||||| |||| ||||||||||| || ||| |||||| |||||| | |||| Sbjct 986 TCGTCGCCCGTGTTCTTGCGCAGCTCGAGGAATTCCTCGATGTCCAGGTGCCAGGTCTCC 927 Query 79498 AGATAGATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTG 79557 || || || || | ||||||||||||||||| |||||| ||| | ||||||| Sbjct 926 AGGTACGTGCAGACGGCGCCCTTGCGCTTGCCGCC---CTGGTTCACGGCCACGGCCGTG 870 Query 79558 TTGTTGAAAACTCGGAGCATGGGCACGATGCCGTCGGCGA--CGCCGTTCGTCCCGTTGA 79615 | ||||| || ||| | |||||| | ||| | |||| |||||||||| || |||| Sbjct 869 TCGTTGACCACCTTGAGGAAGGGCACCACGCC--CTGCGACTCGCCGTTCGTGCCTTTGA 812 Query 79616 TTCGTGTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGG 79675 | || | ||| || || | | || |||| | | || | ||| |||| |||||| Sbjct 811 TGCGCGAACCCAGGGCGCGCACGCGCGTCCAGTCGTTGCCCAGGCCGCCGGCGAACTTGG 752 Query 79676 AGATGTGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTC--GATCG 79720 | | | ||| ||||||| || ||| |||||||| || ||||| Sbjct 751 ACAGCAGGGCGTTTTCCTTGATCGACTCATAGATGCCGTCCAGATCG 705 >seq1997 Length=5797 Score = 120 bits (132), Expect = 3e-22 Identities = 214/311 (69%), Gaps = 5/311 (2%) Strand=Plus/Minus Query 59825 TATCCACTCCGAGACGTACTCGCTCATGATCGATAAGTTGGTCAAGGATCCGGAAGAGAA 59884 ||||||| ||| || || || || |||| |||| || || || ||| | ||| || Sbjct 2424 TATCCACAGCGAAACCTATTCTCTTCTGATTGATACGTATGTAAAAGATGAAGCAGAAAA 2365 Query 59885 GGCTGGTCTGTTCCGTGCCATAGAGACGTCCCCCGCAGTTAAACAAAAAGCAGAATGGGC 59944 || || |||| || | || | || ||| |||| ||||||| || ||||| Sbjct 2364 GGACCAGCTTTTCCACGCTTTGGAAGTATTTCCGGCAATTAAGAAAAAAGCGGACTGGGC 2305 Query 59945 CATGCAGTGGAT-GAGTCCTGGAGCATCATTTGCACAACGTCTCATAGCTTTTGCATGCG 60003 | | ||||| || ||| | |||||||| || | || || ||||||||| || Sbjct 2304 TTTAAAATGGATTGAATCC----GATTCATTTGCTGAAAGACTGATTGCTTTTGCAGCCG 2249 Query 60004 TGGAAGGAATCTTCTTCTCTGGCTCGTTCTGTGCTATTTTCTGGCTCAAAAAGCGTGGCC 60063 | ||||||||||| ||||| || | |||||| |||| | ||| | ||||| ||||| Sbjct 2248 TAGAAGGAATCTTTTTCTCAGGAGCATTCTGTTCTATCTATTGGTTGAAAAAACGTGGAT 2189 Query 60064 TCATGCCGGGCCTGAGTTTCTCCAACGAGCTGATTTCCCGGGACGAGGGCCTCCATCAGG 60123 | |||||||| || | ||| || || || ||||||| || || || ||| | ||| | Sbjct 2188 TGATGCCGGGTCTTACTTTTTCAAATGAATTGATTTCACGTGATGAAGGCGTACATTGTG 2129 Query 60124 AGTTTGCAGTG 60134 | ||||||||| Sbjct 2128 ATTTTGCAGTG 2118 >seq5920 Length=2356 Score = 104 bits (114), Expect = 3e-17 Identities = 121/162 (75%), Gaps = 5/162 (3%) Strand=Plus/Plus Query 78183 GGCGCGTGTTCGCAAATAGTACATGCCCGTCTTGAGACCCTTCTTCCATCCGTACAGGTG 78242 |||||| | |||| |||||| || ||||||| |||| |||||| |||||| || Sbjct 134 GGCGCGAG--CGCAGGTAGTACGTG---GTCTTGATGCCCTGCTTCCACGCGTACATGTA 188 Query 78243 CATACTCGACAGCTTGGCCAGACTCGGGTTCTCCATGAAGATGTTGAGCGACTGGGACTG 78302 ||| ||||| | | | | ||||| |||||||||| | ||||||||| |||||| Sbjct 189 CATGGACGACATCGCGCCGATGTTCGGGCTCTCCATGAACAGGTTGAGCGAGGCGGACTG 248 Query 78303 GTCGATGTACGCACCGCGGTCGGCCGCCATGTCGATGACCGA 78344 ||||||| | || || ||| |||| ||||||||||| | ||| Sbjct 249 GTCGATGAAGGCGCCACGGCCGGCGGCCATGTCGATCAGCGA 290 Score = 95.1 bits (104), Expect = 1e-14 Identities = 111/147 (76%), Gaps = 5/147 (3%) Strand=Plus/Minus Query 20666 ATCGACATGGCGGCCGATCGCGGCGCCTACATCGACCAGTCCCAGTCGCTCAATGTCTTC 20725 ||||||||||| |||| || ||||||| ||||||||||||| |||||||| | ||| Sbjct 284 ATCGACATGGCCGCCGGCCGTGGCGCCTTCATCGACCAGTCCGCCTCGCTCAACCTGTTC 225 Query 20726 ATGGAGAATCCGAGCCT-GGCGAAGCTGAGCTCCATGCATATGTACGGCTGGCACAAGGG 20784 ||||||| |||| | | |||| | || |||||| | ||||||| ||| | |||| Sbjct 224 ATGGAGAGCCCGAACATCGGCG-CGATGTCGTCCATGTACATGTACGCGTGGAAGCAGGG 166 Query 20785 GCTCAAGACGGGCATGTACTATCTGCG 20811 ||||||| || |||||| ||||| Sbjct 165 CATCAAGAC---CACGTACTACCTGCG 142 >seq7623 Length=1882 Score = 98.7 bits (108), Expect = 1e-15 Identities = 190/278 (68%), Gaps = 2/278 (1%) Strand=Plus/Plus Query 166188 TGATCCTGACGCGACCGGCCGTGAGCGTCGAGGAGCAGCACGGGTTCCTTCCCGGCAGTC 166247 |||||||| ||| ||||| ||| | || ||| ||| || ||||| |||||| | Sbjct 1202 TGATCCTGGTGCGCCCGGCGGTGGAAGCCGGCGAGAAGCTGGGCTTCCTGCCCGGCGACC 1261 Query 166248 TCGAGC-AGAAGATGGAGCCGTGGACTCGACCCATGTTCGACGCCCTGTACCGGTACATG 166306 | |||| ||||| | || || | ||||| ||| ||||||||||||| | ||| Sbjct 1262 T-GAGCCAGAAGGTCGACCCCTACCTACGACCGCTGTACGACGCCCTGTACGAGATGATG 1320 Query 166307 AGCCCTAAGAAGGTTCGGGATCTCATGGAAAATCACGTCATCGAGATCTGTCCTCTGGCG 166366 || ||||||| | || ||||||| |||||||||| ||| || ||||| Sbjct 1321 GGCGTGGAGAAGGTGGTCAAGCTGCTGGAAAAGAACGTCATCGAAATCGCGCCGCTGGCC 1380 Query 166367 TACATGCGCGGTCGGACGTTCGACAACGCCTGGATTATCGGGGATGAGATGCAGAACTCG 166426 |||||||| || || ||| || || | |||| | ||| ||| || |||||| | Sbjct 1381 TACATGCGTGGCCGCACGCTCAACGATGCCTTCGTGATCCTGGACGAAGCACAGAACACC 1440 Query 166427 ACGCCGGGTCAGATGAAGATGCTTCTGACCCGGATCGG 166464 || | |||||||||||| | |||||||| |||| Sbjct 1441 ACCATCGAGCAGATGAAGATGTTCCTGACCCGCCTCGG 1478 >seq1567 Length=6860 Score = 87.8 bits (96), Expect = 2e-12 Identities = 271/416 (65%), Gaps = 10/416 (2%) Strand=Plus/Plus Query 79383 CATGAAGAGGTCCGGGATCCACAGGGCCGTGAAGAGGTCGCGGCAACGCATCTCCTCGTC 79442 |||||| ||||| |||||||| ||||||| | |||| | || || || Sbjct 282 CATGAACAGGTCGGGGATCCAGTTGGCCGTGTTCATGTCGTGCGTGCGGCGGCGGTCATC 341 Query 79443 GCCCTGGTTCAGACGCAGCTCGAGAAAGTCCATGATGTCGGCGTGCCACGGCTCCAGATA 79502 ||| |||| |||||||| || || ||| |||||| ||||| | ||||| || Sbjct 342 GCCGGTGTTCTTGCGCAGCTCCAGGAACTCCTCGATGTCCAGATGCCAGGTTTCCAGGTA 401 Query 79503 GATGGCGAACGAACCCTTGCGCTTGCCGCCGCCCTGGTTGACGTACCGGGCCGTGTTGTT 79562 | | | | ||||||||||| |||||||||||| || | ||| |||| ||| Sbjct 402 GGTACACACGGCGCCCTTGCGCTT---GCCGCCCTGGTTCACCGCCACGGCGGTGTCGTT 458 Query 79563 GAAAACTCGGAGCATGGGCACGATGCCGTCGGCGA--CGCCGTTCGTCCCGTTGATTCGT 79620 || || || | |||||| | ||| | |||| ||||||| || || ||||| | Sbjct 459 GACCACCTTCAGAAAGGGCACCACGCC--CTGCGATTCGCCGTTGGTGCCCTTGATGTGG 516 Query 79621 GTACCGCTCGCCCGAATGTTCGAGCAGTGGATTCCGATGCCCCCGGACCACTTGGAGATG 79680 | || || || | | || |||| | | || | ||| |||| ||||||||| Sbjct 517 GAGCCCAGAGCGCGCACGCGCGTCCAGTCGTTGCCCAGGCCGCCGGCAAACTTGGAGAGC 576 Query 79681 TGCGCGCACTCCTTGAGCGTCTCGTAGATGCCCTCGATCGAGTCGTCCTTCATAGCGACC 79740 | ||| ||||||| || || |||||||| || | |||||| || | | | Sbjct 577 AGGGCGTTTTCCTTGATCGATTCATAGATGCCGTC---CAGGTCGTCGGGCACCGTGGTC 633 Query 79741 AGGAAGCAGCTCGACATCTGTGGGTTGTTCGTACCGGCGTTGAAGAGGGTCGGCGT 79796 ||| ||||||| || | ||| | | ||| ||| |||||| ||||| ||||| Sbjct 634 AGGTAGCAGCTGGAGAGCTGCGAGCGCAGCGTGCCGCTGTTGAACAGGGTGGGCGT 689 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 548281124714160