Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_028112.1 Length=178262 Score E Sequences producing significant alignments: (Bits) Value seq14623 188 8e-43 seq451 188 8e-43 seq32362 178 1e-39 seq20474 158 1e-33 seq19645 156 5e-33 seq31848 143 3e-29 seq25614 143 3e-29 seq195 143 3e-29 seq27836 140 4e-28 seq34564 136 5e-27 seq34320 134 2e-26 seq7414 132 5e-26 seq2166 131 2e-25 seq1997 123 3e-23 seq31347 98.7 1e-15 seq121 82.4 9e-11 >seq14623 Length=969 Score = 188 bits (208), Expect = 8e-43 Identities = 178/227 (78%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| ||||| || |||||||||||||| || |||||||| || ||| | Sbjct 34 ATGCAAATCTTCGTCAAAACTCTTACCGGCAAGACCATCACTCTTGAAGTCGAGAGCTCT 93 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || | ||||| ||| | ||||| ||||| ||||| ||||| || ||||| || ||||| Sbjct 94 GACACCATTGACAATGTAAAGGCAAAAATCCAGGATAAGGAAGGCATTCCCCCGGACCAA 153 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAAT 27585 |||||||| || |||||||| ||||| || || |||| || ||||| || || || ||| Sbjct 154 CAGCGTCTGATATTTGCTGGAAAGCAGCTGGAAGATGGCCGAACCCTTGCCGATTACAAT 213 Query 27586 GTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||| ||||||||||| || ||||| ||| | ||||| | ||||| Sbjct 214 ATCCAGAAGGAATCCACGCTGCATCTTGTCCTCCGTCTGAGGGGTGG 260 Score = 156 bits (172), Expect = 5e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| ||||| || || || || ||||| || || | || |||||| || | Sbjct 262 ATGCAGATCTTCGTCAAAACCCTGACTGGTAAGACGATAACGTTGGAAGTTGAG--AGCT 319 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| ||||| ||| | || || || || ||||||||||| ||||| || || |||| Sbjct 320 CGGATACCATTGACAATGTAAAAGCCAAGATCCAGGACAAGGAAGGAATCCCGCCTGACC 379 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||| ||||| || ||||| || ||||| ||||| || | || ||||| |||||||| | Sbjct 380 AGCAACGTCTGATATTTGCCGGAAAGCAGCTCGAAGACGGCCGAACCCTGGCAGACTACA 439 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | ||||||||||| || || ||||| ||| | ||| | | ||||| Sbjct 440 ATATTCAAAAGGAATCAACCCTGCATCTCGTCCTCCGTTTGAGGGGTGG 488 Score = 156 bits (172), Expect = 5e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||||||||| || || || || ||||| |||||| | || || ||| || | Sbjct 718 ATGCAGATCTTTGTCAAAACCCTAACAGGTAAGACCATTACTTTGGAAGTGGAG--AGCT 775 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | ||| |||||||||| || ||||||||||| || || || || |||| Sbjct 776 CGGACACCATCGACAATGTGAAGGCTAAGATACAGGACAAGGAAGGCATCCCCCCTGACC 835 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||||| || || |||||||| || || ||||| |||| || ||||| || ||||| | Sbjct 836 AGCAGCGCCTGATCTTTGCTGGAAAACAGCTCGAAGATGGCCGAACCCTTGCTGACTACA 895 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 || | || || ||||| || | ||||| ||| | ||||| | ||||| Sbjct 896 ATATTCAGAAAGAATCTACCTTGCATCTTGTCCTCCGTCTGAGAGGTGG 944 Score = 147 bits (162), Expect = 2e-30 Identities = 171/229 (75%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| || || || || || ||||| || || | || |||||| || | Sbjct 490 ATGCAGATTTTTGTTAAAACCCTCACTGGAAAGACGATCACCTTGGAAGTTGAG--AGCT 547 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| |||| ||| | ||||| || || |||||||| ||||| ||||| || |||| Sbjct 548 CGGATACTATTGATAATGTCAAGGCCAAGATCCAGGACAAAGAGGGCATTCCCCCTGACC 607 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 |||||||| |||| ||||| || ||||| |||||||||| | | ||||| || || || | Sbjct 608 AGCAGCGTTTAATCTTTGCCGGAAAGCAGCTCGAGGATGGTAGAACCCTTGCCGATTACA 667 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| || |||||||| | || || ||| | ||||| | ||||| Sbjct 668 ACATCCAGAAAGAATCCACCTTGCACCTGGTCCTCCGTCTGAGGGGTGG 716 >seq451 Length=16219 Score = 188 bits (208), Expect = 8e-43 Identities = 562/856 (66%), Gaps = 27/856 (3%) Strand=Plus/Plus Query 80004 TACCGTCACCTGAATTGGCTTGGCCTTTGCCCGCGTCCGC--AGATAGTACATGCCCGTC 80061 ||| || | |||||| | | ||| |||| |||||||| | |||||||||||||||| Sbjct 7591 TACGGTGAACTGAATGGCGTCGGCTTTTGG--GCGTCCGCGCATATAGTACATGCCCGTC 7648 Query 80062 TTGAGGCCCTTCTTCCAGCCGTACAGGTGCATAGAACTGAGCTTCGCAAGTGTGGGGTTC 80121 ||||||||||| ||||| | || | |||||||| |||| || | || || | Sbjct 7649 TTGAGGCCCTTTTTCCATGCATAGAAATGCATAGATGTGAGTTTACTGATCGTCGGATCG 7708 Query 80122 TCCATGAAGATGTTCAGAGACTGAGACTGACAGATGAAAGCCCCACGATCTGCCGCCATT 80181 | ||| || || || || ||| ||| || ||| |||| |||||||| |||| ||| Sbjct 7709 GCAATGTGAATATTGAGCGATTGACTCTGGCAAATGTAAGCGCCACGATCAGCCGACATG 7768 Query 80182 TCAATAATTGACTTTTGTGGAATTTCCCATACTGTACGATAC---ACCTTACGAAGCTCC 80238 || | | |||||||| |||||||| || || ||| |||| | | Sbjct 7769 TCCAAGACCGACTTTTGCTTGATTTCCCACACGGTCTTGTACTTTTCCTT---GATATGG 7825 Query 80239 TCTGGAAT-GTCCAGA--TTTTGCACACTGCCACCGTCCTTTACAATTTGATTTTTCAAT 80295 |||||||| ||| || |||||||| |||||||| || | |||||||| | | Sbjct 7826 TCTGGAATGGTCTTGACCTTTTGCACCGATCCACCGTCGTTCAAGATTTGATTACGGACT 7885 Query 80296 TCAGACGTCCAGACACCAAGCTTGTGCAGATCTTTCACAAGGTGCTTGTTAATCATGACA 80355 |||| |||||||| || | | ||| || |||| || |||||||| | || | Sbjct 7886 TCAGGCGTCCAGATGCCCAAATCAATCAGCTCCTTCATCAGATGCTTGTTGACGATCGTA 7945 Query 80356 AACTCTCCCGCGAGGGTGCGACGCAGATACAGGTTTGTAGTGTAAGGCTCAAATGCCTCG 80415 ||||| || ||||| |||||| |||| ||||| ||||| ||||| | | || Sbjct 7946 AACTCACCAGCGAGTACGCGACGATTGTACATGTTTGATGTGTACGGCTCGATGGATTCA 8005 Query 80416 TTGTTTCCGAGGATCTGAGCCGTGCTCGCCGTCGGCATCGGGCCGACCAACAGTGAATTC 80475 ||||| || |||||||| || || || || ||||| || | || | || || || Sbjct 8006 TTGTTGCCCAGGATCTGGGCAGTTGAAGCAGTTGGCATAGGAGCCACTAGCAAAGAGTTA 8065 Query 80476 CGCAGGCCGTGCTTCTTGATATCCTCGCGCAAATCTGACCAAAAATCAACCCCA----AC 80531 || | |||||||| | | || ||| ||| | | ||| || ||| || Sbjct 8066 CGAATACCGTGCTTGATCACATTCTCCTTCAAGGCGGTCCAGTCCCAAAGACCAGACGAC 8125 Query 80532 GCTGTG--ACCCCACATGTCGTGCTGCAAGATGCCCTCCGACGCCGGAGACCCCGCGAAC 80589 | ||| |||||||||||| || ||||| |||| || || || ||| |||| Sbjct 8126 GGAGTGACACCCCACATGTCAAATTGGAAGATCCCCTTGCTGGCAGGGGAGCCCTGGAAC 8185 Query 80590 GTCTCGTACGGGCCCTCCGTCTTGGCCAGCTC---ACACGACTCCATAAGGGCCGCGTGA 80646 ||||||||||| ||| |||||| | ||| | | | |||||| | |||| Sbjct 8186 GTCTCGTACGGACCCAGTTCCTTGGCAATCTCCATAGAAGTCTCCAT---CGAAGCGTAG 8242 Query 80647 TAAATGCACTCAAAGACGCCCTTGTTCACACCGCGCGCCTGTGGGTCGTCGAACGACAAG 80706 || ||| |||||||| | |||||||| | || |||| | || |||| ||| Sbjct 8243 TAGATGGTCTCAAAGATGTTCTTGTTCAGTTCACGAGCCTCTTCACTTTCAAACGCAAAG 8302 Query 80707 CCCATCATCATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGC 80766 ||| | | || | || ||||| || ||||| || || | | || || |||||| Sbjct 8303 TTCATGAGAAGAAAAGCATCGGCCAGACCTTGAACACCAATTCCCACGGGACGATGGCGC 8362 Query 80767 TTGTTCGATCGCTCG-GCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAG 80825 |||| ||| ||| || || | || ||||| |||| || ||||| ||| || Sbjct 8363 ATGTTGGAT-TTTCGAGCTTCTGCAACCGGGTAGTAGTTGACGTCAATGACTTTGTTGAG 8421 Query 80826 GTTGCGTGTAACAACC 80841 |||||| || || ||| Sbjct 8422 GTTGCGGGTGACGACC 8437 >seq32362 Length=298 Score = 178 bits (196), Expect = 1e-39 Identities = 178/229 (78%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| |||||| | || ||||||||||| || || ||||||||| || | Sbjct 6 ATGCAGATATTTGTGAAGACGTTGACAGGCAAGACTATCACACTGGAGGTTGAG--AGCT 63 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| |||| || | || || ||||||||||||||||| || ||||| || || | Sbjct 64 CCGATACGATTGATAACGTAAAAGCGAAAATTCAGGACAAGGAAGGGATTCCACCTGATC 123 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || ||||||||||| || || ||||||| || || || || || |||| Sbjct 124 AGCAGAGGCTCATATTTGCTGGTAAACAGCTGGAGGATGGGCGAACTCTGGCCGATTATA 183 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| |||||||| || ||||| || ||||||||||| || ||||| Sbjct 184 ACATCCAGAAGGAATCTACACTTCACCTTGTCTTGCGTCTGCGTGGTGG 232 >seq20474 Length=655 Score = 158 bits (174), Expect = 1e-33 Identities = 168/220 (76%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || ||||| ||||| || || || ||||| || ||||| ||||| ||| || | Sbjct 324 ATGCAGATTTTTGTGAAGACCCTCACTGGTAAGACAATCACTCTCGAGGTAGAG--AGCT 267 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 |||| |||| ||| | ||||| || || || |||||||||||||| || ||||||| Sbjct 266 CCGATACAATTGACAATGTTAAGGCCAAGATCCAAGACAAGGAGGGAATCCCACCAGACC 207 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || |||||||| ||||| ||||| |||| || ||| | || ||||||| Sbjct 206 AGCAGAGGCTCATCTTTGCTGGGAAGCAGCTCGAAGATGGCCGCACCTTGGCCGACTATA 147 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 | | || ||||| ||||| || || || ||| | ||||| Sbjct 146 ACATTCAGAAGGAGTCCACCCTCCACCTTGTCCTTCGTCT 107 Score = 156 bits (172), Expect = 5e-33 Identities = 163/212 (77%), Gaps = 4/212 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||||||||| || ||||| |||||||||||||| || || |||||||| ||| || | Sbjct 552 ATGCAAATCTTCGTTAAGACCCTTACCGGCAAGACCATCACCCTTGAGGTCGAG--AGCT 495 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | ||| | ||| | || || ||||||||||||||||| || || |||| Sbjct 494 CCGACACAATCGATAATGTAAAGTCCAAGATCCAGGACAAGGAGGGAATCCCCCCGGACC 435 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || || ||||||||||| || || |||| || ||| | || ||||| | Sbjct 434 AGCAGAGGCTCATCTTCGCTGGTAAGCAGCTTGAAGATGGCCGCACCTTGGCTGACTACA 375 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 || |||| ||||| ||||| || || || ||| Sbjct 374 ATATCCAGAAGGAGTCCACGCTCCACCTGGTC 343 >seq19645 Length=690 Score = 156 bits (172), Expect = 5e-33 Identities = 173/229 (76%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || |||||||| ||||| ||||| || || || ||||| ||| || | Sbjct 348 ATGCAGATCTTCGTGAAGACGCTGACCGGGAAGACCATAACCCTCGAGGTGGAG--AGCT 405 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | || | || | ||||| || || |||||||||||||| |||||||| |||| Sbjct 406 CCGACACGATCGATAACGTCAAGGCAAAGATCCAGGACAAGGAGGGGATTCCTCCGGACC 465 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || ||||| || ||||| |||||||||| || || || || ||||| | Sbjct 466 AGCAGAGGCTGATCTTTGCCGGGAAGCAGCTCGAGGATGGCCGCACGCTTGCGGACTACA 525 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 | |||| ||||| || || ||||| || || | ||||| || ||||| Sbjct 526 ACATCCAGAAGGAGTCGACCCTTCACCTTGTGCTCCGTCTCCGTGGTGG 574 Score = 141 bits (156), Expect = 1e-28 Identities = 159/211 (75%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| || ||||| |||||||| ||||| || || || ||||| ||| || | Sbjct 120 ATGCAGATCTTCGTGAAGACCCTTACCGGGAAGACCATCACGCTCGAGGTGGAG--AGCT 177 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | |||| ||| | ||||| || || ||||||||||| || ||||| || |||| Sbjct 178 CCGACACGATTGACAATGTCAAGGCGAAGATCCAGGACAAGGAAGGCATTCCCCCGGACC 237 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || || || || ||||| |||||||||| || || || || ||||||| Sbjct 238 AGCAGAGGCTGATATTCGCCGGGAAGCAGCTCGAGGATGGCCGCACACTCGCGGACTATA 297 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGT 27614 | |||| ||||| || || || || || || Sbjct 298 ACATCCAGAAGGAGTCGACCCTCCACCTCGT 328 >seq31848 Length=311 Score = 143 bits (158), Expect = 3e-29 Identities = 141/182 (77%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 27451 GAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGA 27510 ||||||||| ||||| |||| || |||||||||| ||||| |||||||| || Sbjct 1 GAGGTTGAGAGCTCTGATACGATTGATAACGTGAAGGCTAAGATTCAAGACAAGGAAGGT 60 Query 27511 ATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACC 27570 ||||||||||| |||||| | || || ||||| || ||||| || ||||||| || || Sbjct 61 ATTCCTCCAGATCAGCAGAGACTCATCTTTGCCGGGAAGCAGCTGGAGGATGGCCGAACA 120 Query 27571 CTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGT 27630 || || || ||||| |||| |||||||| || || || || ||||||||||| || ||| Sbjct 121 CTCGCCGATTATAACATCCAGAAGGAATCAACCCTCCACCTTGTCTTGCGTCTGCGTGGT 180 Query 27631 GG 27632 || Sbjct 181 GG 182 >seq25614 Length=477 Score = 143 bits (158), Expect = 3e-29 Identities = 165/220 (75%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 |||||||||||||| || || || || || ||||| ||||| | || |||||| || | Sbjct 270 ATGCAAATCTTTGTAAAAACACTAACTGGAAAGACAATTACATTGGAAGTTGAG--AGCT 213 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||||| || | ||||| || || ||||||||||| |||||||| || |||| Sbjct 212 CGGACACCATTGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGAATTCCCCCTGACC 153 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || || ||||||||||| || ||||||| | ||| | || || || | Sbjct 152 AGCAGAGGCTTATCTTCGCTGGTAAGCAGCTGGAGGATGGCAGGACCTTGGCTGATTACA 93 Query 27584 ATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCT 27623 || | ||||||||||| || || ||| | || | ||||| Sbjct 92 ATATTCAAAAGGAATCGACCCTGCATTTGGTGCTTCGTCT 53 Score = 114 bits (126), Expect = 1e-20 Identities = 149/206 (72%), Gaps = 0/206 (0%) Strand=Plus/Minus Query 27427 CTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGTGATAGCATTGCAAATTTGAAG 27486 || ||||| ||||| || ||||| || || ||| ||| | ||||| ||| | || Sbjct 477 CTCACCGGTAAGACCATCACTCTCGAAGTCGAGAGCTCTGACACCATTGACAATGTTAAA 418 Query 27487 GCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGT 27546 ||||| || ||||||||||| || || || || |||||||||||||| || || || || Sbjct 417 GCTAAGATCCAGGACAAGGAAGGGATCCCCCCCGACCAGCAGCGTCTGATCTTCGCAGGA 358 Query 27547 AAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTT 27606 ||||| || ||||| | || ||||| || || || || |||| || ||||| || || Sbjct 357 AAGCAGCTTGAGGACGGCCGAACCCTTGCCGATTACAACATCCAGAAAGAATCTACCCTC 298 Query 27607 CATCTAGTCTTGCGTCTTCGCGGTGG 27632 || || || | ||| | | ||||| Sbjct 297 CACCTTGTTCTCCGTTTGAGGGGTGG 272 >seq195 Length=24554 Score = 143 bits (158), Expect = 3e-29 Identities = 360/540 (67%), Gaps = 9/540 (2%) Strand=Plus/Plus Query 64314 TGATTTGTGGGAGCTTTACAAGAAAGCCATCGCAAGTTTCTGGACGGTCGAGGAGGTTGA 64373 |||| | ||| || | ||||||||||| || || ||||||| |||||| | || Sbjct 22734 TGATGTCTGGCAGATGTACAAGAAAGCTGAGGCCTCGTTTTGGACGGCTGAGGAGCTGGA 22793 Query 64374 TCTCGCCAAGGATCTCAGCGACTGGGAAAACCTAAACTCAC-AGGAACAGCACTTCATCA 64432 ||| | | || | | || ||| ||||||| ||| || | || | ||||| |||| Sbjct 22794 TCTGGTGCACGACATTAAAGATTGGAAAAACCT-CACTGACAACGAGCGTCACTTTATCA 22852 Query 64433 AGTTGGTCCTAGCATTCTTCGCATCAAGTGACGGAATTGTGTTTGAGAATTTGGACCTAA 64492 || || || || ||||| ||| | ||||| || |||||| ||| || ||| | | | Sbjct 22853 AGCATGTGCTCGCCTTCTTTGCAGCCAGTGATGGCATTGTGAATGAAAACCTGGCCATGA 22912 Query 64493 ATTTTACAAAGGATGTTCAGATCCCAGAGGCGCGGTCATTCTATGCGTATCAGGGATT-- 64550 | || | || || || ||| | || || || |||| ||||| | | ||| |||| Sbjct 22913 ACTTCAGCAACGAAGTGCAGGTTCCCGAAGCTCGGTGTTTCTACGGTTTTCA--GATTGC 22970 Query 64551 TAACGAAAGTATTCATGGCGAGACGTATTCGCTCATGATTGACAAGTTTGTTCGGGATCC 64610 || ||| | ||||| ||| |||||||| | ||||||| || | ||| | Sbjct 22971 TATCGAGAACATTCACTCGGAGGTCTATTCGCTACTCATTGACACGTACATCAAGGACGC 23030 Query 64611 TGTCGAGAAGGATGGACTGTTCAGGGCTATAGAGACTGTACCCGCTGTTACTAAAAAGGC 64670 ||| |||||||| || | | || || || ||| | || ||| | || || || Sbjct 23031 TGTAGAGAAGGACCTTTTGCTGCGTGCCATTGACACTATCCCGTGTGTGAAGAAGAAAGC 23090 Query 64671 TGAATGGGCCATCCGGTGG-ATGA--ATCGTGGGTCGTCGTTTGGTCAGCGTCTCGCAGC 64727 | ||||| || |||| ||| |||| |||||| | | ||||||| || Sbjct 23091 CGCTTGGGCACTCAAGTGGTGTGACCCGCGTGTGTCGTCATACGCAGAGCGTCTTCTTGC 23150 Query 64728 TTTTGCCTGTGTGGAAGGAATTTTCTTTTCTGGGTCATTCTGTTCTATTTTCTGGCTAAA 64787 || |||| ||||| || || ||||| ||||| || ||||| || || |||||||| || Sbjct 23151 GTTCGCCTCAGTGGAGGGTATCTTCTTCTCTGGCTCCTTCTGCTCCATCTTCTGGCTGAA 23210 Query 64788 AAAGCGGGGCCTGATGCCAGGTCTGTCGTTTTCGAACGAGCTGATCTCTCGGGACGAGGG 64847 || || || || ||||| ||||| |||||||| ||||| ||| ||| || ||||| Sbjct 23211 GAAACGTGGTCTCATGCCTGGTCTCAGCTTTTCGAATGAGCTTATCAGTCGTGATGAGGG 23270 >seq27836 Length=415 Score = 140 bits (154), Expect = 4e-28 Identities = 128/162 (79%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 27471 CATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCG 27530 ||||| ||| |||||||||| || |||||||||||||||||||| || ||||||||| | Sbjct 23 CATTGACAATGTGAAGGCTAAGATCCAGGACAAGGAGGGAATTCCACCTGACCAGCAGAG 82 Query 27531 TCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATAATGTCCA 27590 | || ||||| |||||||| || || |||| |||||| || || || || ||| | || Sbjct 83 GTTGATCTTTGCCGGTAAGCAGCTGGAAGATGGTCGTACTCTGGCCGATTACAATATTCA 142 Query 27591 AAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGGTGG 27632 |||||||| || ||||| || || | ||||| || ||||| Sbjct 143 GAAGGAATCGACCCTTCACCTGGTGCTCCGTCTCCGTGGTGG 184 >seq34564 Length=234 Score = 136 bits (150), Expect = 5e-27 Identities = 140/181 (77%), Gaps = 4/181 (2%) Strand=Plus/Plus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| |||||||||||||| || ||||| ||||| || || || ||||| ||| || | Sbjct 54 ATGCAGATCTTTGTCAAGACCCTCACCGGGAAGACCATCACCCTCGAGGTGGAG--AGCT 111 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | || ||||||| || || |||||||||||||| || ||||| |||| Sbjct 112 CGGACACCATCGATAACGTGAAGGCCAAGATCCAGGACAAGGAGGGCATCCCTCCGGACC 171 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || ||||| |||||||| |||||||| | | ||||| || ||||| | Sbjct 172 AGCAGAGGCTTATCTTTGCGGGTAAGCAGCTCGAGGACGGGAGGACCCTTGCGGACTACA 231 Query 27584 A 27584 | Sbjct 232 A 232 >seq34320 Length=242 Score = 134 bits (148), Expect = 2e-26 Identities = 145/190 (76%), Gaps = 4/190 (2%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| ||||| |||||||| || ||||||||||| || ||||| ||||| ||| || | Sbjct 188 ATGCAGATCTTCGTCAAGACCCTCACCGGCAAGACCATCACTCTCGAGGTCGAG--AGCT 131 Query 27466 --GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACC 27523 || | ||| | || | ||||| || || ||||||||||| || || || || |||| Sbjct 130 CCGACACCATCGACAACGTCAAGGCCAAGATCCAGGACAAGGAAGGCATCCCGCCGGACC 71 Query 27524 AGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTATA 27583 ||||| | || || || ||||| ||||| |||||||||| |||||| | || ||||| | Sbjct 70 AGCAGAGGCTGATCTTCGCTGGCAAGCAGCTCGAGGATGGCCGTACCTTGGCCGACTACA 11 Query 27584 ATGTCCAAAA 27593 | |||| || Sbjct 10 ACATCCAGAA 1 >seq7414 Length=1926 Score = 132 bits (146), Expect = 5e-26 Identities = 166/225 (74%), Gaps = 2/225 (1%) Strand=Plus/Minus Query 27406 ATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGGT 27465 ||||| || || || |||||| | || |||||||| || |||||||| || ||||| Sbjct 224 ATGCAGATTTTCGTGAAGACGTTGACGGGCAAGACGATCACTCTTGACGTCGAGTCGTCG 165 Query 27466 GATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGACCAG 27525 || || | || ||||| | || |||||||||||||| || |||||||| |||||| Sbjct 164 GACTCGATCGACAACGTGAAGACGAAGATTCAGGACAAGGAAGGCATTCCTCCTGACCAG 105 Query 27526 CAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCT-AGCAGACTATAA 27584 |||||| | ||||| || || ||||| || ||||||| || || | ||| ||||| || Sbjct 104 CAGCGTTTGATTTTCGCCGGCAAGCAGCTGGAGGATGGCCGCACGTTGAGC-GACTACAA 46 Query 27585 TGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGCGG 27629 | || ||||| || || || || || || | ||||| ||||| Sbjct 45 CATTCAGAAGGAGTCGACGCTGCACCTTGTGCTTCGTCTGCGCGG 1 >seq2166 Length=5462 Score = 131 bits (144), Expect = 2e-25 Identities = 146/194 (75%), Gaps = 1/194 (1%) Strand=Plus/Minus Query 27403 ATAATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCA 27462 || ||||| |||||||| ||||| || ||||||||||| || || | || || ||| | Sbjct 966 ATCATGCAGATCTTTGTGAAGACCCTGACCGGCAAGACCATCACGTTGGACGTGGAGCCG 907 Query 27463 GGTGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGGAATTCCTCCAGAC 27522 || |||||| ||| | ||| ||||| ||||| ||||| || ||||| || ||| Sbjct 906 TCCGACTGCATTGACAATGTCAAGCAGAAAATCCAGGAAAAGGAAGGTATTCCGCCTGAC 847 Query 27523 CAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGTACCCTAGCAGACTAT 27582 |||||||| || |||||||| || ||||| |||||||||| || || || | ||||| Sbjct 846 CAGCAGCGCCTGATTTTTGCCGGCAAGCAGCTCGAGGATGGCCGAACGCTTTCGGACTAC 787 Query 27583 AATGTCCA-AAAGG 27595 || |||| ||||| Sbjct 786 AACATCCAGAAAGG 773 >seq1997 Length=5797 Score = 123 bits (136), Expect = 3e-23 Identities = 629/987 (64%), Gaps = 27/987 (3%) Strand=Plus/Plus Query 80716 ATGAACACGTCAGCCAGGCCCTGAACGCCGATGGCGATCGGGCGGTGGCGCTTGTTCGAT 80775 ||||| | || ||||| |||||||| || | | | ||| ||||| ||| | || || Sbjct 30 ATGAAGGCATCTGCCAGACCCTGAACCCCTAATCCAACCGGACGGTGACGCATATTTGAA 89 Query 80776 CGCTCGGCCTCCGGAATTGGGTAAAAGTTATTATCGATGACGCGGTTCAGGTTGCGTGTA 80835 || || ||||||| || ||| |||| | || ||||| ||||||||| | ||| Sbjct 90 TTTTCTGCTTCCGGAACCGGATAATAGTTTCTGTCAATGACCTTGTTCAGGTTTCTTGTT 149 Query 80836 ACAACCCGTGTAACATCATGAAGT--TTC-TGAAAGTCGAATTGGTTCCCCTT--CACAA 80890 ||| ||| || | || ||| ||| || || ||| || ||| || ||||| Sbjct 150 ACACGTTTTGTTACGTTATAAAGCAGTTCGTG---GTTGAACTG--TCCGTTTTCCACAA 204 Query 80891 ATGCCGGAAGGCTCAGGGACGCCAGATTGCACACGGCCA---CCTCTTCAGCATCTGTAA 80947 | || | | || ||||| || || || || | | |||| || | |||| Sbjct 205 ACATTGGCAATGAGATAGAAGCCAGGTTACATACCGCAATTTCATCTTTAGAAG-TGTA- 262 Query 80948 ACTCGACGATTTCCGTGCACAAATTAGAAGACTTAATTGTACCCAGGTTTTTCTGGTTTG 81007 ||| | |||||| || |||| |||||||| ||||| ||||||||||||||||||| Sbjct 263 -CTCCATGATTTCTGTACACAGGTTAGAAGAGCGGATTGTTCCCAGGTTTTTCTGGTTTG 321 Query 81008 ACTTGGCGTTGCAAGCGTCCTTGTAGCACATGTACGGGGTACCGGTCTCGACCTGTGACT 81067 | || ||| || || || || |||||| || || ||||| || | || || | Sbjct 322 ATTTACGGTTTGCCGCATCTTTATACAGCATGTATGGTGTTCCGGTTTCAATTTGAGATT 381 Query 81068 TGAGGATGGCGTCCCAAATCTCGCGCGCCTTGACCACCTTGCGGAATTTGCCTTCGGCCA 81127 || || ||||||| || | ||||| | || | | |||| | | Sbjct 382 CCAGAATTTTTTCCCAAAGTTCTCTTGCCTTAATGGTTTTTCTTCCTCTGCCCTGTTCTT 441 Query 81128 CATACTTGGCGTAAGCTTCGTCGAACTTGGCACCGTGAAGTTCAGTGAGGTCTGGGCACT 81187 |||| | ||| | || || | |||||| || ||| || | ||||| | Sbjct 442 CATAAGAAGTATAAAGCGCTTCAAATTCTTCACCGTAAATATCATAAAGTCCCGGGCATT 501 Query 81188 CGTTAGGGCACATCAGGTGCCAGTCGGTGTCGTTCTCTACAGCCTTCATGAAAGCGTCAG 81247 |||| || ||||||| ||| | || | || ||| |||||||| ||| | Sbjct 502 CGTTTGGACACATCAACGTCCATGTAGAATCTTCCTGAACACGTTTCATGAACAAGTCCG 561 Query 81248 GGATCCAGAGGGCGGTGAACAGGTCGCG-GCAGCGCGCCTCCTCATCACCCTGGTTGAGG 81306 |||| | ||| ||| | || || ||| ||| || || | || ||||| Sbjct 562 AAGTCCACATGGCAAAGAATAAATCACGCGCA-CGCATTTCTTCTTTTCCATGGTTTTTC 620 Query 81307 CGCAACTCGAGAAAGTCCATGATGTCCGCATGCCATGGCTCCAGATACACGGCGATCGAC 81366 || || || || || | || || || ||||||| || | ||| | || | Sbjct 621 TTCAGGTCAAGGAAATCAAAAATATCAGCGTGCCATGTTTCGATATAGATAGCAAAACTT 680 Query 81367 CCCTTGCGA---CGGCCACCCTGGTTGACGTAACGGGCAGTCGCGTTAAATACACGCAAC 81423 || ||||| | || ||||||| || ||||| || || | || || ||||||||| Sbjct 681 CCTTTGCGTTTTCCTCCTCCCTGGTCTACATAACGAGCGGTATCATTGAAAACACGCAAC 740 Query 81424 ATAGGGATGATACCATCTGACTGACCGTTCGTACCCACGATACGCGACCCCTTGGCGCGC 81483 || || | || || | |||| ||||| || || |||| || ||| |||| || Sbjct 741 ATCGGAACAATTCCGTTTGACGTTCCGTTTGTTCCGCGGATATAGGAACCCGTGGCACGA 800 Query 81484 ACCTTGCTGATTGAAAGACCGATGCCACCTGACCACTTTGAAATCTGAGCACACCGGTTC 81543 || || ||||||||| ||||| || || | | | | |||||| | || | || Sbjct 801 ACATTATGGATTGAAAGCCCGATTCCTCCAGCCGATTGTGAAATTTTGGCTGTTTGCTTT 860 Query 81544 ATGGTCTCATAAATTCCCTCGATGCTATCTTTTTTCATGTCAAGCAAGAAACAGCTTGAC 81603 | || || |||||||| ||||| || || | | ||| | || | ||| ||| ||| Sbjct 861 AGCGTATCGTAAATTCCGTCGATACTGTCGTCCTGCATTGCCAGAAGGAAGCAGGAAGAC 920 Query 81604 ATCTGAGGGCTTTTTGAG--CCGGCATTGAACAGTGTTGGGGTCGCGTGAATGAAATAAC 81661 || || || |||| ||| ||||||||||| | ||||| || || || | ||| ||| Sbjct 921 ATTTGCGG--TTTTGGAGTTCCGGCATTGAATAACGTTGGCGTTGCATGCGT-AAAGAAC 977 Query 81662 -GGTTTGACATCAGGTCATAGGTTTCC 81687 || |||||||||||||| |||||| Sbjct 978 TTCTTGGACATCAGGTCATAAGTTTCC 1004 >seq31347 Length=324 Score = 98.7 bits (108), Expect = 1e-15 Identities = 104/137 (76%), Gaps = 0/137 (0%) Strand=Plus/Minus Query 27496 CAGGACAAGGAGGGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTC 27555 |||||||||||||| || || || ||||||||| | || || || ||||| ||||| ||| Sbjct 322 CAGGACAAGGAGGGGATCCCGCCGGACCAGCAGAGGCTTATCTTCGCTGGGAAGCAGCTC 263 Query 27556 GAGGATGATCGTACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTC 27615 ||||| | || ||||| || || || || | || |||||||| || || || || ||| Sbjct 262 GAGGACGGGCGCACCCTTGCGGATTACAACATTCAGAAGGAATCGACCCTCCACCTTGTC 203 Query 27616 TTGCGTCTTCGCGGTGG 27632 | || || || ||||| Sbjct 202 CTCCGCCTCCGTGGTGG 186 >seq121 Length=30622 Score = 82.4 bits (90), Expect = 9e-11 Identities = 93/125 (74%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 27508 GGAATTCCTCCAGACCAGCAGCGTCTAATTTTTGCTGGTAAGCAACTCGAGGATGATCGT 27567 |||||||| || |||||||||||||| || || ||||| ||||| || || |||| ||| Sbjct 21208 GGAATTCCCCCTGACCAGCAGCGTCTGATCTTCGCTGGCAAGCAGCTGGAAGATGGTCGC 21149 Query 27568 ACCCTAGCAGACTATAATGTCCAAAAGGAATCCACTCTTCATCTAGTCTTGCGTCTTCGC 27627 | || || || || || |||| || || || || | || || || ||||||| || Sbjct 21148 TCTCTGGCGGATTACAACATCCAGAAAGAGTCGACGTTGCACCTCGTGCTGCGTCTGCGT 21089 Query 27628 GGTGG 27632 ||||| Sbjct 21088 GGTGG 21084 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 27405 AATGCAAATCTTTGTCAAGACGCTTACCGGCAAGACTATTACTCTTGAGGTTGAGTCAGG 27464 |||||| || || |||||||| ||||| |||||||| || || || || || ||| || Sbjct 21383 AATGCAGATTTTCGTCAAGACCCTTACGGGCAAGACCATCACGCTCGACGTGGAGCCATC 21324 Query 27465 TGATAGCATTGCAAATTTGAAGGCTAAAATTCAGGACAAGGAGGG 27509 ||| |||||| ||| | ||| |||||||||||||| ||||| Sbjct 21323 GGATTGCATTGACAATGTCAAGCTCAAAATTCAGGACAAAGAGGG 21279 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 570057046733680