Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_028660.1 Length=61035 Score E Sequences producing significant alignments: (Bits) Value seq29522 116 1e-21 >seq29522 Length=371 Score = 116 bits (128), Expect = 1e-21 Identities = 84/96 (88%), Gaps = 1/96 (1%) Strand=Plus/Minus Query 10210 ATATGGTGGCCCTTGCTGGATTTGAACCAGCGACCTGGCGATTATGAGTCGCTCGCTCTC 10269 || ||||||||| ||||||| |||||||||||||| ||||||||||||||| ||||| Sbjct 280 ATTTGGTGGCCCCTGCTGGACTTGAACCAGCGACCAAGCGATTATGAGTCGCCTGCTCTA 221 Query 10270 ACCACTGAGCTAAAGGGCCG-GGCGCAGGATAATAA 10304 ||||||||||||| |||||| |||| ||||| |||| Sbjct 220 ACCACTGAGCTAAGGGGCCGTGGCGGAGGATTATAA 185 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 195108024649446