Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_028686.1 Length=166313 Score E Sequences producing significant alignments: (Bits) Value seq16087 141 1e-28 >seq16087 Length=871 Score = 141 bits (156), Expect = 1e-28 Identities = 93/103 (90%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 48885 GAAACACGAATGGTCAGCTGCGGATATTTTTCCGGATGCTCAACCGCGTCCAGCAGAGTT 48944 || ||||||||||||||||| || |||||||| || |||||||| ||||||| ||| ||| Sbjct 1 GACACACGAATGGTCAGCTGTGGGTATTTTTCAGGGTGCTCAACGGCGTCCATCAGCGTT 60 Query 48945 TCACGACGCAGCACGTTAACGTTCAGGTGCTGACCGCCTTCAA 48987 || |||||||||||||||||||||||||||||||| ||||||| Sbjct 61 TCGCGACGCAGCACGTTAACGTTCAGGTGCTGACCACCTTCAA 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 531837232954120