Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_028832.1 Length=61511 Score E Sequences producing significant alignments: (Bits) Value seq1923 95.1 5e-15 >seq1923 Length=5946 Score = 95.1 bits (104), Expect = 5e-15 Identities = 94/122 (77%), Gaps = 0/122 (0%) Strand=Plus/Plus Query 54623 ATGCCCGACGCACATTTCGGCAAAGGCAGCTCGGTCGGCACAGTCATCCCCACCCAAGGC 54682 ||||| |||| || | ||||| ||| | |||||| | || ||||| |||| || Sbjct 3437 ATGCCGGACGTGCACCTGGGCAAGGGCGCGACCGTCGGCTCGGTGATCCCGACCCGCGGT 3496 Query 54683 GCCGTCATCCCGGCCGCCGTCGGCGTCGACATCGGCTGCGGCATGATCGCAGCCCGCACC 54742 || ||||||||||||| ||||||||||||||||||||||||||| || | |||||| Sbjct 3497 GCGATCATCCCGGCCGCAGTCGGCGTCGACATCGGCTGCGGCATGGCGGCCGTACGCACC 3556 Query 54743 AC 54744 || Sbjct 3557 AC 3558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 196630581820014