Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_028935.1 Length=88698 Score E Sequences producing significant alignments: (Bits) Value seq14841 82.4 4e-11 >seq14841 Length=953 Score = 82.4 bits (90), Expect = 4e-11 Identities = 65/78 (83%), Gaps = 0/78 (0%) Strand=Plus/Plus Query 47450 CCCTTAGTTCAATTGGATAGAGCAAGTGCCTTCTAAGCACTGAGTTACAGGTTCGAGTCC 47509 ||||||| |||| |||||||||||| ||||||||||||| | || ||||||||||||| Sbjct 26 CCCTTAGCTCAACTGGATAGAGCAACTGCCTTCTAAGCAGTAGGTCGCAGGTTCGAGTCC 85 Query 47510 TGTAGGGTGTGCCAGTTT 47527 || |||| |||| ||| Sbjct 86 TGCAGGGGTCGCCATTTT 103 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 283585916764161