Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_028945.1 Length=206713 Score E Sequences producing significant alignments: (Bits) Value seq776 86.0 8e-12 >seq776 Length=11329 Score = 86.0 bits (94), Expect = 8e-12 Identities = 178/265 (67%), Gaps = 0/265 (0%) Strand=Plus/Minus Query 181319 GATCATCAGTGTCGGCAAAGCCAACGGTTCGCGGTCAAGCTGTTCCTTCACCTGATCGAA 181378 |||| ||| ||||| | || || || | ||| | ||||| || ||||| ||| Sbjct 10757 GATCTGCAGCGTCGGGTAGGCGAAGGGCTGGCGCGCCAGCTGGGTCTCGACCTGGGTGAA 10698 Query 181379 GTGATTGTTGTAGATGTGGGTATCACCAAGGTTGCCGATCAGTTCCCCGACTTCAAGACC 181438 ||| ||||||||||||||| || ||| | | | || | || || || | || | Sbjct 10697 GTGGTTGTTGTAGATGTGGCAGTCGCCACCGGTCCAGACGAAGTCGCCCACCTGCAGGTC 10638 Query 181439 ACATTCCAGCGCGATCAGATGTGTCAGGAGCGCGTAAGAGGCGATGTTGAAGGGAAGCCC 181498 |||| | | || | || || ||||| |||||||| ||||||||||||||||| || Sbjct 10637 GCATTGCTGGGCCAGCATGTGGGTCAGCAGCGCGTAGCTGGCGATGTTGAAGGGAACGCC 10578 Query 181499 CAAGAAGACGTCCACGGACCGCTGATTCCAAAGGCAGGACAGTTTGTCATTGCGAACATA 181558 || ||||| |||| || ||||| | ||||| || ||| | | | || || Sbjct 10577 CAGGAAGATGTCCGCGCTGCGCTGGTATAGCTGGCAGCTGAGCTTGCCGTCGGCCACGTA 10518 Query 181559 GAACTGGAATCCGTAGTGGCACGGC 181583 ||||||||| | |||||| ||| Sbjct 10517 GAACTGGAAGAAGGCGTGGCAGGGC 10493 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 661059801930120