Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_028960.1 Length=50999 Score E Sequences producing significant alignments: (Bits) Value seq15871 84.2 7e-12 >seq15871 Length=886 Score = 84.2 bits (92), Expect = 7e-12 Identities = 58/66 (88%), Gaps = 0/66 (0%) Strand=Plus/Plus Query 4283 CAGTAGCTCAACTGGAAGAGCAGCGGTCTCCAAAGCCGCGAGTTGGAGGTTCGAGTCCTC 4342 ||||||||||| ||| |||||||||||||||||| |||| ||||| ||||||||||| Sbjct 627 CAGTAGCTCAATTGGCAGAGCAGCGGTCTCCAAAACCGCAGGTTGGGGGTTCGAGTCCCT 686 Query 4343 CCTGGC 4348 |||||| Sbjct 687 CCTGGC 692 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 163006378086798