Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_028979.1 Length=57253 Score E Sequences producing significant alignments: (Bits) Value seq12370 102 3e-17 >seq12370 Length=1162 Score = 102 bits (112), Expect = 3e-17 Identities = 124/169 (73%), Gaps = 0/169 (0%) Strand=Plus/Plus Query 43729 CGTCACGTCGCCGCCGTACTTTGGTCTGCGCAACTACGGGCAGCCCGGCCAGTACGGCAT 43788 |||||||||||||||||| || || || ||| ||||||| || ||| ||| | Sbjct 4 CGTCACGTCGCCGCCGTATTTCGGCCTCCGCGACTACGGCGTCGATGGACAGATCGGGCT 63 Query 43789 CGAGGCGACCCCGGCCGAGTACGTCGAGAAGCTGCGGAAGCTGTTCGGCGAGCTGCGCCG 43848 ||| | | || | || | |||||| ||| | || ||||| | ||| | ||||| Sbjct 64 GGAGCCATCGCCAGAGGAATTCGTCGACGCCCTGGTGCAGGTGTTCCGGGAGGTTCGCCG 123 Query 43849 CGTCCTGGCCGACGACGGCACCCTGTGGCTGAACCTCGGCGACACCTAC 43897 ||||||| || ||||||||| ||||||||||||||||||||| |||| Sbjct 124 CGTCCTGCGGGATGACGGCACCGTGTGGCTGAACCTCGGCGACAGCTAC 172 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 183010732172370