Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_029311.1 Length=124049 Score E Sequences producing significant alignments: (Bits) Value seq4977 84.2 2e-11 >seq4977 Length=2742 Score = 84.2 bits (92), Expect = 2e-11 Identities = 89/115 (77%), Gaps = 2/115 (2%) Strand=Plus/Plus Query 4472 GTGCGCGTAATTATCATCGGCCAGGATCCGTACCACCGCCCCGGGCAGGCCCATGGGCTG 4531 |||||||| | ||| | || ||||| ||||||||| ||| ||| |||||| | ||| || Sbjct 1669 GTGCGCGTGGTCATCCTGGGGCAGGACCCGTACCACGGCCGCGGCCAGGCCGAGGGGTTG 1728 Query 4532 GCGTTCAGCGTG-CGCCGGGGGCTGCCGATACCGCCCAGCCTGCGCAACATCTTC 4585 |||||| ||| |||| || | ||| | | |||||| ||||||||||||||| Sbjct 1729 GCGTTCTCGGTGGCGCCCGGCG-TGCAGCTGCCGCCCTCGCTGCGCAACATCTTC 1782 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396660119535790