Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_030230.1 Length=372707 Score E Sequences producing significant alignments: (Bits) Value seq5719 188 2e-42 seq14623 172 1e-37 seq28136 158 3e-33 seq20474 154 4e-32 seq25614 150 4e-31 seq27836 131 4e-25 seq7414 131 4e-25 seq34320 129 1e-24 seq32362 125 2e-23 seq31848 125 2e-23 seq19645 123 6e-23 seq2166 123 6e-23 seq547 120 7e-22 seq3326 114 3e-20 seq1316 114 3e-20 seq598 113 1e-19 seq31347 111 4e-19 seq34564 104 6e-17 seq23303 104 6e-17 seq19869 104 6e-17 seq17302 102 2e-16 seq14004 102 2e-16 seq1161 102 2e-16 seq121 93.3 1e-13 >seq5719 Length=2433 Score = 188 bits (208), Expect = 2e-42 Identities = 214/287 (75%), Gaps = 0/287 (0%) Strand=Plus/Minus Query 7441 ACGTTATATTTAATATTTGGTGGCTTTTCTGGTATTATAGGTACTATATTTTCTATGATT 7500 || ||||||||||| ||| ||| ||| | |||||| | || || | | ||||||| | Sbjct 1128 ACTTTATATTTAATTTTTAGTGCTTTTGCAGGTATTGTGGGAACAACACTTTCTATTTTA 1069 Query 7501 ATAAGGTTAGAATTAGCTGCTCCGGGTTCTCAAATATTGAGTGGTAATAGCCAACTTTAC 7560 || || |||||||||| || ||| |||||| || | || ||| ||| | || Sbjct 1068 ATTAGAATAGAATTAGCACAACCAGGTAATCAAATTTTTATGGGAAATCATCAATTATAT 1009 Query 7561 AACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTTTTTTGTTATGCCGGTTATG 7620 || ||| || |||| || || || ||||| ||| |||||||||| |||||||| | | | Sbjct 1008 AATGTTGTTGTTACTGCACACGCTTTTGTAATGGTTTTCTTTTTAGTTATGCCTGCTTTA 949 Query 7621 ATAGGCGGTTTCGGAAATTGATTCGTTCCTTTAATGATTGGTGCTCCTGATATGGCTTTT 7680 || || || || || || || || ||||| ||||||||||| |||||||||||||| ||| Sbjct 948 ATTGGTGGATTTGGTAACTGGTTTGTTCCATTAATGATTGGAGCTCCTGATATGGCATTT 889 Query 7681 CCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCCTTCCTTATT 7727 ||| | | || |||||||||||||| ||| |||| || | ||||| Sbjct 888 CCACGAATGAATAATATAAGTTTTTGGTTATTACCTCCAGCTTTATT 842 Score = 104 bits (114), Expect = 6e-17 Identities = 86/104 (83%), Gaps = 1/104 (1%) Strand=Plus/Plus Query 370672 TTCAGGATGACCAAAAAATCAGAATAAATGTTGATAAAGGATAGGATCGCCTCCGCCTGA 370731 ||||||||| |||||||| || |||||||||||||| | | |||||| ||||| || || Sbjct 445 TTCAGGATGTCCAAAAAACCAAAATAAATGTTGATATAATACAGGATCACCTCCACCAGA 504 Query 370732 TGGATCAAAAAAGCTAGTATTAAAATTTCTATCAGTTAA-AACA 370774 ||||||| |||| |||||| ||||||| ||| ||||| |||| Sbjct 505 TGGATCATAAAATGAAGTATTTAAATTTCGATCTGTTAATAACA 548 Score = 91.5 bits (100), Expect = 4e-13 Identities = 130/182 (71%), Gaps = 6/182 (3%) Strand=Plus/Plus Query 371365 AATGGTAATTTATGCATAGATAAACCAGGTACTCTCATATTAAATATCGTAGTAATAAAG 371424 || |||||| |||| | | |||||| || | | ||||||| | || || | ||||| Sbjct 623 AAAGGTAATCTATGAAAACTTAAACCTGGAGCACGCATATTATAAATAGTTGATATAAAA 682 Query 371425 TTTATAGCGCCTAGAAGAGAAGATATACCTGCAAGATGTAAACTAAATATTGCTAAATCG 371484 ||||| || |||| | |||||| ||||||| | |||||||||||| || |||||||| Sbjct 683 TTTATCGCACCTAATAAAGAAGAAATACCTGTTAAATGTAAACTAAAAATAGCTAAATCT 742 Query 371485 ACGGAACCGCCGGAGTGAGC---TACAATAGAACTTAACGGCGGGTAAACTGTTCAGCCG 371541 || ||| || || || || |||| | || ||| || ||||| || || || || Sbjct 743 ACTGAAGGCCCAGAATGTGCTTGTACACTTGA---TAAAGGGGGGTACACAGTCCAACCT 799 Query 371542 GT 371543 || Sbjct 800 GT 801 >seq14623 Length=969 Score = 172 bits (190), Expect = 1e-37 Identities = 167/215 (78%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| || || |||||||| || |||| |||||||||||| | |||| |||||| Sbjct 245 AGGACAAGATGCAGCGTGGATTCCTTCTGGATATTGTAATCGGCAAGGGTTCGGCCATCT 186 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||| || || || || |||||||| || ||||| |||||||| || Sbjct 185 TCCAGCTGCTTTCCAGCAAATATCAGACGCTGTTGGTCCGGGGGAATGCCTTCCTTATCC 126 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||| ||| ||| ||| || |||||||| ||| | || || || | ||||| ||| Sbjct 125 TGGATTTTTGCCTTTACATTGTCAATGGTGTCAGAGCTCTCGACTTCAAGAGTGATGGTC 66 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || | |||||| | ||| | |||||| || Sbjct 65 TTGCCGGTAAGAGTTTTGACGAAGATTTGCATCTT 31 Score = 143 bits (158), Expect = 6e-29 Identities = 159/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| || || || || ||||| ||||| | |||||| || |||| |||| || ||| Sbjct 473 AGGACGAGATGCAGGGTTGATTCCTTTTGAATATTGTAGTCTGCCAGGGTTCGGCCGTCT 414 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || || || || ||||| ||||| ||||| || ||||||||||| Sbjct 413 TCGAGCTGCTTTCCGGCAAATATCAGACGTTGCTGGTCAGGCGGGATTCCTTCCTTGTCC 354 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| || ||| || ||||| || ||| | || || || ||||| |||||| Sbjct 353 TGGATCTTGGCTTTTACATTGTCAATGGTATCCGAGCTCTCAACTTCCAACGTTATCGTC 294 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||| ||||| | ||| | ||||| Sbjct 293 TTACCAGTCAGGGTTTTGACGAAGATCTGCAT 262 Score = 140 bits (154), Expect = 8e-28 Identities = 149/197 (76%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||| || | || |||||||| || | |||||| || || | |||| |||||| Sbjct 929 AGGACAAGATGCAAGGTAGATTCTTTCTGAATATTGTAGTCAGCAAGGGTTCGGCCATCT 870 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||| || ||||| ||||| || || || ||||| || || || ||||||||||| Sbjct 869 TCGAGCTGTTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGGATGCCTTCCTTGTCC 810 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| ||||||| ||||||||||| ||| | ||||| || || || || ||| Sbjct 809 TGTATCTTAGCCTTCACATTGTCGATGGTGTCCGAGCTCTCCACTTCCAAAGTAATGGTC 750 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || || | ||||| Sbjct 749 TTACCTGTTAGGGTTTT 733 Score = 134 bits (148), Expect = 3e-26 Identities = 148/197 (75%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| ||||| | ||||||||||| |||| ||||||||||| | ||||| ||||| Sbjct 701 AGGACCAGGTGCAAGGTGGATTCTTTCTGGATGTTGTAATCGGCAAGGGTTCTACCATCC 642 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| | || || ||||| || ||||| || || ||||| Sbjct 641 TCGAGCTGCTTTCCGGCAAAGATTAAACGCTGCTGGTCAGGGGGAATGCCCTCTTTGTCC 582 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| || || || || ||| | || || || || ||||||||| Sbjct 581 TGGATCTTGGCCTTGACATTATCAATAGTATCCGAGCTCTCAACTTCCAAGGTGATCGTC 522 Query 225682 TTGCCCGTCAAAGTTTT 225698 || || || | ||||| Sbjct 521 TTTCCAGTGAGGGTTTT 505 >seq28136 Length=407 Score = 158 bits (174), Expect = 3e-33 Identities = 170/225 (76%), Gaps = 0/225 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| ||||| |||||||| | || || ||||| || | |||||||| |||| ||| Sbjct 233 ACGAAGCCTCAGCACAAGGTGCAAGGTTGACTCTTTCTGAATGTTGTAATCCGCCAGAGT 174 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| | |||||| || || || || || ||||| ||||||||||| || || Sbjct 173 GCGTCCATCTTCCAACTGCTTGCCCGCAAATATCAGACGTTGCTGGTCGGGCGGGATCCC 114 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAA 225671 ||| ||||| ||||| || ||||||| ||||| || || | |||| || ||||| Sbjct 113 TTCTTTGTCCTGGATTTTGGCCTTCACATTGTCGATTGTATCGCTGCTTTCAACTTCTAA 54 Query 225672 CGTGATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 || || ||||||||||||| || |||| ||| | ||||| || Sbjct 53 GGTTATGGTCTTGCCCGTCAGGGTCTTTACGAAGATCTGCATCTT 9 >seq20474 Length=655 Score = 154 bits (170), Expect = 4e-32 Identities = 163/215 (76%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 ||||| |||||||| ||||| || || |||| |||||| || ||||| || | |||||| Sbjct 341 AGGACCAGGTGGAGCGTGGACTCCTTCTGGATATTGTAGTCAGCCAAGGTGCGGCCATCT 400 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| ||||||||||| || | || ||||| || || || || |||||||| Sbjct 401 TCAAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGGGGGATTCCCTCCTTGTCC 460 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| ||||| ||||| ||| | || || || | ||||| ||| Sbjct 461 TGGATCTTGGACTTTACATTATCGATTGTGTCGGAGCTCTCGACCTCAAGGGTGATGGTC 520 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||| || | || || | ||| | |||||| || Sbjct 521 TTGCCGGTAAGGGTCTTAACGAAGATTTGCATCTT 555 Score = 132 bits (146), Expect = 1e-25 Identities = 142/188 (76%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| ||||| || || || | || || |||||||| || | |||||| Sbjct 113 AGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCCAAGGTGCGGCCATCT 172 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||||||||| ||||| || | || ||||| || || || || ||||||||| Sbjct 173 TCGAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGGATTCCCTCCTTGTCT 232 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| ||| ||| || || || || ||| | || || || | ||||| ||| Sbjct 233 TGGATCTTGGCCTTAACATTGTCAATTGTATCGGAGCTCTCTACCTCGAGAGTGATTGTC 292 Query 225682 TTGCCCGT 225689 || || || Sbjct 293 TTACCAGT 300 >seq25614 Length=477 Score = 150 bits (166), Expect = 4e-31 Identities = 155/203 (76%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 225511 TGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGC 225570 || || || ||||| ||||| | ||||||||| ||||| || || ||||| || |||||| Sbjct 68 TGCAGGGTCGATTCCTTTTGAATATTGTAATCAGCCAAGGTCCTGCCATCCTCCAGCTGC 127 Query 225571 TTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTT 225630 || |||||||||||||| | || ||||| || ||||| ||||||||||| |||||||| Sbjct 128 TTACCAGCGAAGATAAGCCTCTGCTGGTCAGGGGGAATTCCTTCCTTGTCCTGGATCTTG 187 Query 225631 TGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTC 225690 ||| || || |||||||| ||| | || || || || || || ||||| || || Sbjct 188 GCCTTGACGTTGTCAATGGTGTCCGAGCTCTCAACTTCCAATGTAATTGTCTTTCCAGTT 247 Query 225691 AAAGTTTTTATGAACACTTGCAT 225713 | ||||||| || | |||||| Sbjct 248 AGTGTTTTTACAAAGATTTGCAT 270 Score = 141 bits (156), Expect = 2e-28 Identities = 144/188 (77%), Gaps = 0/188 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || ||||||||||| || |||||||| |||| ||||||||||| | |||| || || Sbjct 287 AGAACAAGGTGGAGGGTAGATTCTTTCTGGATGTTGTAATCGGCAAGGGTTCGGCCGTCC 346 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || |||||||| || || || |||||||| || || ||||||||||| Sbjct 347 TCAAGCTGCTTTCCTGCGAAGATCAGACGCTGCTGGTCGGGGGGGATCCCTTCCTTGTCC 406 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 |||||||| || ||| || |||||||| ||| | || || || | ||||| ||| Sbjct 407 TGGATCTTAGCTTTAACATTGTCAATGGTGTCAGAGCTCTCGACTTCGAGAGTGATGGTC 466 Query 225682 TTGCCCGT 225689 || || || Sbjct 467 TTACCGGT 474 >seq27836 Length=415 Score = 131 bits (144), Expect = 4e-25 Identities = 129/167 (77%), Gaps = 0/167 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || || ||||| || || ||||| || || | |||||||||||||| ||| | |||||| Sbjct 169 AGCACCAGGTGAAGGGTCGATTCCTTCTGAATATTGTAATCGGCCAGAGTACGACCATCT 110 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || || ||||| | | || ||||| || ||||| || |||||||| Sbjct 109 TCCAGCTGCTTACCGGCAAAGATCAACCTCTGCTGGTCAGGTGGAATTCCCTCCTTGTCC 50 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTC 225668 |||||||| ||||||| || |||||||| ||| ||||||| || Sbjct 49 TGGATCTTAGCCTTCACATTGTCAATGGTGTCCGAGCTTTCCACTTC 3 >seq7414 Length=1926 Score = 131 bits (144), Expect = 4e-25 Identities = 158/215 (73%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| || || || || || || | ||||| ||| ||| || | ||||| Sbjct 13 AGCACAAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAACGTGCGGCCATCC 72 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || |||||||| || ||||| || | || || ||||| || ||||| ||||||||||| Sbjct 73 TCCAGCTGCTTGCCGGCGAAAATCAAACGCTGCTGGTCAGGAGGAATGCCTTCCTTGTCC 132 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 || ||||| |||||| ||||| | ||| || | || ||||| | ||||||||| Sbjct 133 TGAATCTTCGTCTTCACGTTGTCGATCGAGTCCGACGACTCGACGTCAAGAGTGATCGTC 192 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCATTTT 225716 ||||||||||| || || | ||| | ||||| || Sbjct 193 TTGCCCGTCAACGTCTTCACGAAAATCTGCATCTT 227 >seq34320 Length=242 Score = 129 bits (142), Expect = 1e-24 Identities = 143/191 (75%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 225526 TTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATA 225585 || |||| ||||| |||||||| || | ||||| || |||||||| ||||||||||| Sbjct 1 TTCTGGATGTTGTAGTCGGCCAAGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 60 Query 225586 AGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCG 225645 || | || ||||| ||||| || ||||||||||| |||||||| ||| || ||| Sbjct 61 AGCCTCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 120 Query 225646 ATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCAAAGTTTTTATGAAC 225705 |||||||| ||| | || || || | ||||| |||||||| || | || || | ||| Sbjct 121 ATGGTGTCGGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAAG 180 Query 225706 ACTTGCATTTT 225716 | ||||| || Sbjct 181 ATCTGCATCTT 191 >seq32362 Length=298 Score = 125 bits (138), Expect = 2e-23 Identities = 154/208 (74%), Gaps = 2/208 (1%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || ||||||||| || || ||||| || |||| || |||||||||| ||| Sbjct 227 ACGCAGACGCAAGACAAGGTGAAGTGTAGATTCCTTCTGGATGTTATAATCGGCCAGAGT 168 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || |||||| || ||||| || ||||| || || || | || || || || ||||| || Sbjct 167 TCGCCCATCCTCCAGCTGTTTACCAGCAAATATGAGCCTCTGCTGATCAGGTGGAATCCC 108 Query 225612 TTCCTTGTCTTGGATCTTTTGC-TTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTA 225670 ||||||||| || || ||| || || || || || || || ||| | || || || | Sbjct 107 TTCCTTGTCCTGAAT-TTTCGCTTTTACGTTATCAATCGTATCGGAGCTCTCAACCTCCA 49 Query 225671 ACGTGATCGTCTTGCCCGTCAAAGTTTT 225698 ||||| |||||||| ||||| || || Sbjct 48 GTGTGATAGTCTTGCCTGTCAACGTCTT 21 >seq31848 Length=311 Score = 125 bits (138), Expect = 2e-23 Identities = 116/147 (79%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | || |||||||||||| || ||||| || |||| || |||||||| | || Sbjct 177 ACGCAGACGCAAGACAAGGTGGAGGGTTGATTCCTTCTGGATGTTATAATCGGCGAGTGT 118 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 || ||||| || ||||||||||| || ||||| |||| || || || || |||||||| Sbjct 117 TCGGCCATCCTCCAGCTGCTTCCCGGCAAAGATGAGTCTCTGCTGATCTGGAGGAATACC 58 Query 225612 TTCCTTGTCTTGGATCTTTTGCTTCAC 225638 |||||||||||| ||||| |||||| Sbjct 57 TTCCTTGTCTTGAATCTTAGCCTTCAC 31 >seq19645 Length=690 Score = 123 bits (136), Expect = 6e-23 Identities = 158/218 (72%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 225496 AGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTC 225555 || || || || |||||||| || || || || |||| || || || || | || | Sbjct 337 AGCCTGAGCACGAGGTGGAGGGTCGACTCCTTCTGGATGTTATAGTCCGCGAGTGTGCGG 278 Query 225556 CCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCC 225615 ||||| || ||||||||||| ||||| || || | || ||||| || ||||| |||||| Sbjct 277 CCATCCTCGAGCTGCTTCCCGGCGAATATCAGCCTCTGCTGGTCCGGGGGAATGCCTTCC 218 Query 225616 TTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTG 225675 ||||| |||||||| ||| ||| || || ||||| ||| | ||||| || | |||| Sbjct 217 TTGTCCTGGATCTTCGCCTTGACATTGTCAATCGTGTCGGAGCTCTCCACCTCGAGCGTG 158 Query 225676 ATCGTCTTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || ||||| || || | || || | ||| | ||||| Sbjct 157 ATGGTCTTCCCGGTAAGGGTCTTCACGAAGATCTGCAT 120 Score = 122 bits (134), Expect = 2e-22 Identities = 154/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 || |||||||| || || || || || |||| ||||| || || | || | ||||| Sbjct 559 AGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCAAGCGTGCGGCCATCC 500 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||||||||| || ||||| || | || ||||| || ||||| || |||||||| Sbjct 499 TCGAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGAATCCCCTCCTTGTCC 440 Query 225622 TGGATCTTTTGCTTCACAGCTTCGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTC 225681 ||||||||| ||| || ||||| ||||| ||| | ||||| || | || || ||| Sbjct 439 TGGATCTTTGCCTTGACGTTATCGATCGTGTCGGAGCTCTCCACCTCGAGGGTTATGGTC 380 Query 225682 TTGCCCGTCAAAGTTTTTATGAACACTTGCAT 225713 || || |||| || || | ||| | ||||| Sbjct 379 TTCCCGGTCAGCGTCTTCACGAAGATCTGCAT 348 Score = 87.8 bits (96), Expect = 4e-12 Identities = 87/113 (77%), Gaps = 0/113 (0%) Strand=Plus/Minus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 |||||| | ||| || |||||||| ||||| |||||||||| ||||| || || | || Sbjct 113 ACGAAGGCGCAGCACCAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAGTCAGCGAGGGT 54 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCG 225604 | || || || ||||||||||| |||||||| || | || ||||| |||| Sbjct 53 CCGGCCGTCCTCAAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTCCGGCG 1 >seq2166 Length=5462 Score = 123 bits (136), Expect = 6e-23 Identities = 128/168 (76%), Gaps = 0/168 (0%) Strand=Plus/Plus Query 225524 CTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGA 225583 |||| |||| ||||| || | | |||| ||||| || |||||||| || || || | Sbjct 774 CTTTCTGGATGTTGTAGTCCGAAAGCGTTCGGCCATCCTCGAGCTGCTTGCCGGCAAAAA 833 Query 225584 TAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTT 225643 | || || || ||||| ||||||||||||||||| || ||||| || ||||| ||| | Sbjct 834 TCAGGCGCTGCTGGTCAGGCGGAATACCTTCCTTTTCCTGGATTTTCTGCTTGACATTGT 893 Query 225644 CGATGGTGTCTGAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGTCA 225691 | ||| ||| || | |||||||| |||||||| |||||||| |||| Sbjct 894 CAATGCAGTCGGACGGCTCCACGTCCAACGTGATGGTCTTGCCGGTCA 941 >seq547 Length=14638 Score = 120 bits (132), Expect = 7e-22 Identities = 96/116 (83%), Gaps = 0/116 (0%) Strand=Plus/Plus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 || ||||| ||||||||||| || || ||||| || || ||||| |||||||||||||| Sbjct 10105 AAAATTTGTCCATCAGTAATTGAAATTACATTAGTTGGTATATATGCAGAAACATCACCA 10164 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATTTTTATT 4586 ||||||||||| | || |||||| ||||||| || |||||||||| ||| |||| Sbjct 10165 GCTTGTGTTTCAATAATAGGTAAAGCTGTTAAAGAACCACCACCAATTTTTCTATT 10220 Score = 87.8 bits (96), Expect = 4e-12 Identities = 77/96 (80%), Gaps = 0/96 (0%) Strand=Plus/Minus Query 5022 CAATACCTTGCCCCATACACAGGTTGTGTTATAGGAGAATATTTTAGAGATAATGGTAAA 5081 ||||| | || || || || ||||||| | |||| |||||||||||||||||||||||| Sbjct 10430 CAATATTTAGCTCCTTATACTGGTTGTGCTTTAGGTGAATATTTTAGAGATAATGGTAAA 10371 Query 5082 CATGCTTTAATCATCTACGATGATTTAAGTAAACAA 5117 |||||| | || | || ||||||||| |||||| Sbjct 10370 CATGCTGTTATTTTTTATGATGATTTATCAAAACAA 10335 >seq3326 Length=3886 Score = 114 bits (126), Expect = 3e-20 Identities = 102/125 (82%), Gaps = 6/125 (5%) Strand=Plus/Plus Query 6750 AGCCTTTTCCCTTTAACT----TGAGAGAATGATCAGCCACATTGGGACTGA-AAACGGC 6804 ||||| || ||||| || ||| |||||||||||||||||||||||||| | ||||| Sbjct 2210 AGCCTATTATCTTTAGCTGGTTTGAAAGAATGATCAGCCACATTGGGACTGAGACACGGC 2269 Query 6805 CCAAGTCTTCTAAAAGGGCAGCAGTGGAGAATATTTGACAATGGGCGAAAGCTTGATCGA 6864 |||| ||| | || ||||||||||| |||| || ||||||| |||||||||||||| | Sbjct 2270 CCAA-ACTTTTTTAAAGGCAGCAGTGGGGAATTTTGGACAATGAGCGAAAGCTTGATCCA 2328 Query 6865 GTAAT 6869 | ||| Sbjct 2329 GCAAT 2333 Score = 100 bits (110), Expect = 7e-16 Identities = 102/132 (77%), Gaps = 1/132 (1%) Strand=Plus/Minus Query 7731 AGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACA 7790 || ||||||||| |||| |||| |||| ||||||||||||| ||||||||||| | | Sbjct 2897 AGAGTTGGTAAGGTTCTGCGCGTATTATCGAATTAAACCACATGCTCCACCGCTTGTGTA 2838 Query 7791 ATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAAT-ATT 7849 || |||||| || |||||| ||| || |||||| | || | ||||| ||| | || Sbjct 2837 GACTCCCGTCAATTCCTTTGAATTTCAATCTTGCGATTATACTTTTCAGGCGGAGTGCTT 2778 Query 7850 TACGCGTTAGCT 7861 ||||||||||| Sbjct 2777 AACGCGTTAGCT 2766 >seq1316 Length=7819 Score = 114 bits (126), Expect = 3e-20 Identities = 134/179 (75%), Gaps = 4/179 (2%) Strand=Plus/Minus Query 7542 TGGTAATAGCCAACTTTACAACGTTATTATTACGGCGCATGCCTTTGTTATGATTTTCTT 7601 ||||||| ||| | | || |||||| | || |||||||| ||| |||||||||| || Sbjct 7372 TGGTAATTATCAATTATTTAATGTTATTGTAACAGCGCATGCTTTTATTATGATTTTTTT 7313 Query 7602 TTTTGTTATGCCGGTTATGATAGGCGGTTTCGGAAATTGATTCGTTCC--TTTAATGATT 7659 | | |||||||| || | || || ||||| || |||||||| ||||| ||| || | Sbjct 7312 TATGGTTATGCCTATTTTAATTGGAGGTTTTGGGAATTGATTTGTTCCAATTTTATTA-- 7255 Query 7660 GGTGCTCCTGATATGGCTTTTCCAAGGCTTAACAATATAAGTTTTTGATTACTACCGCC 7718 ||||| || |||||||| ||||| | | || ||| ||||||||||| || | || || Sbjct 7254 GGTGCACCAGATATGGCATTTCCTCGTTTAAATAATTTAAGTTTTTGAATATTGCCTCC 7196 >seq598 Length=13668 Score = 113 bits (124), Expect = 1e-19 Identities = 91/110 (83%), Gaps = 0/110 (0%) Strand=Plus/Plus Query 4471 AATATTTGACCATCAGTAATAGAGATAACATTTGTAGGGATATAAGCAGAAACATCACCT 4530 || |||||||||||||||||||| || ||||| || || ||||| ||||||||||| ||| Sbjct 5511 AAAATTTGACCATCAGTAATAGAAATTACATTAGTTGGAATATAGGCAGAAACATCCCCT 5570 Query 4531 GCTTGTGTTTCGACAACAGGTAAGGCTGTTAGTGATCCACCACCAAAATT 4580 ||||||||||| | || ||||| || |||| ||| ||| |||||||| Sbjct 5571 GCTTGTGTTTCAATAATCGGTAACGCGGTTAATGACCCATATCCAAAATT 5620 >seq31347 Length=324 Score = 111 bits (122), Expect = 4e-19 Identities = 99/124 (80%), Gaps = 0/124 (0%) Strand=Plus/Plus Query 225502 AGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGTTCTCCCATCT 225561 |||||||||||||| || ||||| || || | |||||||| || | || | ||| || Sbjct 201 AGGACAAGGTGGAGGGTCGATTCCTTCTGAATGTTGTAATCCGCAAGGGTGCGCCCGTCC 260 Query 225562 TCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACCTTCCTTGTCT 225621 || ||||||||||||||||||||||| | || ||||| ||||| || || |||||||| Sbjct 261 TCGAGCTGCTTCCCAGCGAAGATAAGCCTCTGCTGGTCCGGCGGGATCCCCTCCTTGTCC 320 Query 225622 TGGA 225625 |||| Sbjct 321 TGGA 324 >seq34564 Length=234 Score = 104 bits (114), Expect = 6e-17 Identities = 116/155 (75%), Gaps = 0/155 (0%) Strand=Plus/Minus Query 225535 TTGTAATCGGCCAAAGTTCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGT 225594 ||||| || || | || ||||| || || |||||||| || || |||||||| | || Sbjct 232 TTGTAGTCCGCAAGGGTCCTCCCGTCCTCGAGCTGCTTACCCGCAAAGATAAGCCTCTGC 173 Query 225595 TGGTCGGGCGGAATACCTTCCTTGTCTTGGATCTTTTGCTTCACAGCTTCGATGGTGTCT 225654 ||||| || || || || |||||||| |||||||| |||||| ||||||||||| Sbjct 172 TGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTATCGATGGTGTCC 113 Query 225655 GAGGTTTCCACGTCTAACGTGATCGTCTTGCCCGT 225689 ||| | ||||| || | ||||| ||||| || || Sbjct 112 GAGCTCTCCACCTCGAGGGTGATGGTCTTCCCGGT 78 >seq23303 Length=550 Score = 104 bits (114), Expect = 6e-17 Identities = 92/115 (80%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 7737 GGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTTC 7796 |||||| ||| | |||| ||| ||||||||||||| ||||||||||| | | | | Sbjct 101 GGTAAGGTTCCTCGCGTATCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGACCCC 160 Query 7797 CGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATATTTA 7851 ||||| || |||||||||| ||||||||||||||| | | |||||||| || ||| Sbjct 161 CGTCAATTCCTTTGAGTTTCAACCTTGCGGTCGTACTTCCCAGGTGGATTACTTA 215 >seq19869 Length=681 Score = 104 bits (114), Expect = 6e-17 Identities = 106/137 (77%), Gaps = 1/137 (1%) Strand=Plus/Plus Query 7727 TTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTA 7786 |||||| | |||||| ||| | |||| ||| ||||||||||||| ||||||||||| Sbjct 79 TTCTAGCCTAGGTAAGGTTCCTCGCGTATCATCGAATTAAACCACATGCTCCACCGCTTG 138 Query 7787 TACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAAT 7846 | | | |||||| ||||||||||||| | |||||| | |||| | | |||||||| | Sbjct 139 TGTAGGCCCCCGTCAATTTCTTTGAGTTTCACCCTTGCCGGCGTACTCCCCAGGTGGATT 198 Query 7847 ATTTA-CGCGTTAGCTT 7862 | ||| ||| || |||| Sbjct 199 ACTTATCGCTTTCGCTT 215 >seq17302 Length=804 Score = 102 bits (112), Expect = 2e-16 Identities = 94/119 (79%), Gaps = 0/119 (0%) Strand=Plus/Minus Query 7725 ATTTCTAGGGTTGGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCT 7784 || || |||||||||||| |||| ||||| || ||||||||||||| |||||||||| Sbjct 591 ATGTCAAGGGTTGGTAAGGTTCTGCGCGTTGCTTCGAATTAAACCACATGCTCCACCGCT 532 Query 7785 TATACAATCTTCCGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGG 7843 | | | | |||||| ||||||||||||| || ||||||| |||| | | |||| || Sbjct 531 TGTGTAGGCCCCCGTCAATTTCTTTGAGTTTCAATCTTGCGGCCGTACTCCCCAGGCGG 473 >seq14004 Length=1018 Score = 102 bits (112), Expect = 2e-16 Identities = 100/128 (78%), Gaps = 1/128 (1%) Strand=Plus/Minus Query 7737 GGTAAGATTCTTTGCGTTATATCAAATTAAACCACATACTCCACCGCTTATACAATCTTC 7796 |||||| ||| | |||| ||| ||||||||||||| ||||||||||| | | | | Sbjct 926 GGTAAGGTTCCTCGCGTATCATCGAATTAAACCACATGCTCCACCGCTTGTGCGGGCCCC 867 Query 7797 CGTCAGTTTCTTTGAGTTTTAACCTTGCGGTCGTAGTACTCAGGTGGAATA-TTTACGCG 7855 ||||| || |||||||||| | |||||||| |||| | | ||||||||| | || |||| Sbjct 866 CGTCAATTCCTTTGAGTTTCACCCTTGCGGGCGTACTCCCCAGGTGGAACACTTAACGCT 807 Query 7856 TTAGCTTA 7863 || ||||| Sbjct 806 TTCGCTTA 799 >seq1161 Length=8540 Score = 102 bits (112), Expect = 2e-16 Identities = 74/86 (86%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 372622 TAGGTGTAACAGAATAGAGGGTAGCGACTGTTTACTAAAAACACAGGACTCCGCTAAGTT 372681 ||||||| ||| ||||| |||| ||||||||||| ||||||| ||||||| ||||| | Sbjct 6791 TAGGTGTCACAAAATAGGGGGTTGCGACTGTTTAATAAAAACTTAGGACTCTGCTAAATG 6850 Query 372682 GTAAAACGATGTATAGGGTCTGACAC 372707 |||| | ||||||||||||||||||| Sbjct 6851 GTAACATGATGTATAGGGTCTGACAC 6876 >seq121 Length=30622 Score = 93.3 bits (102), Expect = 1e-13 Identities = 93/121 (77%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 225492 ACGAAGTCTCAGGACAAGGTGGAGAGTGGATTCTTTTTGGACATTGTAATCGGCCAAAGT 225551 ||| || | ||| || ||||| | || || ||||| |||| |||||||| |||| || Sbjct 21089 ACGCAGACGCAGCACGAGGTGCAACGTCGACTCTTTCTGGATGTTGTAATCCGCCAGAGA 21148 Query 225552 TCTCCCATCTTCTAGCTGCTTCCCAGCGAAGATAAGTCGTTGTTGGTCGGGCGGAATACC 225611 | |||||||| |||||||| ||||||||||| || || || ||||| || ||||| || Sbjct 21149 GCGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGGGGAATTCC 21208 Query 225612 T 225612 | Sbjct 21209 T 21209 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1191988188744066