Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_031062.1 Length=75147 Score E Sequences producing significant alignments: (Bits) Value seq1494 84.2 1e-11 >seq1494 Length=7149 Score = 84.2 bits (92), Expect = 1e-11 Identities = 65/76 (86%), Gaps = 1/76 (1%) Strand=Plus/Plus Query 41709 GGTCGTTAGCTCAGTTGGTTAGAGCACCGGACTTTTAATCCGGATGTCATTGGTTCGAGG 41768 || |||||||||||||||| |||||| ||||||||||||||| |||| |||||||| Sbjct 1989 GGACGTTAGCTCAGTTGGT-AGAGCAGCGGACTTTTAATCCGTTGGTCACTGGTTCGACC 2047 Query 41769 CCAATACGACCTACCA 41784 ||| |||| ||||||| Sbjct 2048 CCAGTACGTCCTACCA 2063 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 240241498734732