Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_031090.1 Length=169621 Score E Sequences producing significant alignments: (Bits) Value seq16087 96.9 4e-15 >seq16087 Length=871 Score = 96.9 bits (106), Expect = 4e-15 Identities = 80/98 (82%), Gaps = 0/98 (0%) Strand=Plus/Minus Query 142541 GGTGGTCAACACCTGAACGTTAATGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 142600 |||||||| |||||||||||||| || |||||||| ||||| ||| || || ||| || Sbjct 98 GGTGGTCAGCACCTGAACGTTAACGTGCTGCGTCGCGAAACGCTGATGGACGCCGTTGAG 39 Query 142601 CATCCAGAAAAATATCCGCAGTTGACCATCCGTGTATC 142638 || || |||||||| || ||| ||||||| ||||| || Sbjct 38 CACCCTGAAAAATACCCACAGCTGACCATTCGTGTGTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 542418130433640