Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_031095.1 Length=168758 Score E Sequences producing significant alignments: (Bits) Value seq16087 132 5e-26 >seq16087 Length=871 Score = 132 bits (146), Expect = 5e-26 Identities = 91/103 (88%), Gaps = 0/103 (0%) Strand=Plus/Minus Query 47303 TTGAAGGCGGTCAGCACCTGAACGTTAACGTGTTGCGTCGCGAAACCTTGCTGGATGCGG 47362 ||||||| |||||||||||||||||||||||| ||||||||||||| || |||| || | Sbjct 103 TTGAAGGTGGTCAGCACCTGAACGTTAACGTGCTGCGTCGCGAAACGCTGATGGACGCCG 44 Query 47363 TTGAGCACCCAGAAAAATACCCGCAGCTGACTATTCGCGTTTC 47405 |||||||||| ||||||||||| |||||||| ||||| || || Sbjct 43 TTGAGCACCCTGAAAAATACCCACAGCTGACCATTCGTGTGTC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 539657757239920