Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_032001.1 Length=327147 Score E Sequences producing significant alignments: (Bits) Value seq19645 188 1e-42 seq7414 176 9e-39 seq14623 174 3e-38 seq34320 145 2e-29 seq20474 145 2e-29 seq25614 140 7e-28 seq32362 138 2e-27 seq26026 132 1e-25 seq2166 131 4e-25 seq34564 127 4e-24 seq27836 116 8e-21 seq15490 116 8e-21 seq1527 116 8e-21 seq31848 109 1e-18 seq15722 109 1e-18 seq19291 107 4e-18 seq79 91.5 3e-13 seq31347 89.7 1e-12 seq121 87.8 4e-12 >seq19645 Length=690 Score = 188 bits (208), Expect = 1e-42 Identities = 180/228 (79%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || || || || | || || || |||||||||||||| ||| Sbjct 574 CCACCACGGAGACGGAGCACAAGGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCA 515 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 ||||||||||||||||| || || |||||||||||||||| | || ||||| ||| Sbjct 514 AGCGTGCGGCCATCCTCGAGCTGCTTCCCGGCAAAGATCAGCCTCTGCTGGTCCGGAGGA 455 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || ||||||||||| ||||||||||| || ||| ||||||| |||| || |||| || || Sbjct 454 ATCCCCTCCTTGTCCTGGATCTTTGCCTTGACGTTATCGATCGTGT-CGGAGCTCTCCAC 396 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||| || || ||||| || |||| ||||| ||||| |||||||| Sbjct 395 CTCGAGGGTTATGGTCTTCCCGGTCAGCGTCTTCACGAAGATCTGCAT 348 Score = 136 bits (150), Expect = 8e-27 Identities = 147/192 (77%), Gaps = 2/192 (1%) Strand=Plus/Minus Query 282909 TCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAG 282968 || || |||||||| ||||| || || |||||||||||||| || || |||||||| || Sbjct 310 TCCTTCTGGATGTTATAGTCCGCGAGTGTGCGGCCATCCTCGAGCTGCTTCCCGGCGAAT 251 Query 282969 ATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTA 283028 |||| | || ||||| ||||| || |||||||| |||||||| || || || | Sbjct 250 ATCAGCCTCTGCTGGTCCGGGGGAATGCCTTCCTTGTCCTGGATCTTCGCCTTGACATTG 191 Query 283029 TCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAAC 283087 || || |||| || |||| || || ||||| ||||| ||||| || || | ||||| || Sbjct 190 TCAATCGTGT-CGGAGCTCTCCACCTCGAGCGTGATGGTCTTCCCGGTAAGGGTCTTCAC 132 Query 283088 GAATATCTGCAT 283099 ||| |||||||| Sbjct 131 GAAGATCTGCAT 120 Score = 102 bits (112), Expect = 2e-16 Identities = 91/114 (80%), Gaps = 0/114 (0%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 ||||||||| ||||| || ||||| || | ||| ||||||||||||||||||||||| Sbjct 119 ACCACCACGAAGGCGCAGCACCAGGTGGAGGGTGGACTCTTTTTGGATGTTGTAGTCAGC 60 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTC 282985 || || ||||| ||||| || || |||||||| ||||||| | || ||||| Sbjct 59 GAGGGTCCGGCCGTCCTCAAGCTGCTTCCCGGCGAAGATCAGCCTCTGCTGGTC 6 >seq7414 Length=1926 Score = 176 bits (194), Expect = 9e-39 Identities = 175/227 (77%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 282876 CCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCAAGC 282935 || ||||| ||||| || || || | ||| || || || ||||||||||| | | Sbjct 1 CCGCGCAGACGAAGCACAAGGTGCAGCGTCGACTCCTTCTGAATGTTGTAGTCGCTCAAC 60 Query 282936 GTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGAATA 282995 |||||||||||||| || || || ||||| || |||||||| || |||||| ||||| Sbjct 61 GTGCGGCCATCCTCCAGCTGCTTGCCGGCGAAAATCAAACGCTGCTGGTCAGGAGGAATG 120 Query 282996 CCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACTTCG 283055 || |||||||| || ||||| | || ||| | ||||| | |||||| | ||||| || Sbjct 121 CCTTCCTTGTCCTGAATCTTCGTCTTCACGTTGTCGATCGAGTCCGACGACTCGACGTCA 180 Query 283056 AGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 |||||||||||||| |||||||| ||||| ||||| |||||||| || Sbjct 181 AGAGTGATCGTCTTGCCCGTCAACGTCTTCACGAAAATCTGCATCTT 227 >seq14623 Length=969 Score = 174 bits (192), Expect = 3e-38 Identities = 177/228 (78%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||| || || ||||| || || ||| |||||| ||||||||||| || ||| Sbjct 716 CCACCCCTCAGACGGAGGACCAGGTGCAAGGTGGATTCTTTCTGGATGTTGTAATCGGCA 657 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || | |||||||| || || || ||||||||||| ||||| || |||||| ||| Sbjct 656 AGGGTTCTACCATCCTCGAGCTGCTTTCCGGCAAAGATTAAACGCTGCTGGTCAGGGGGA 597 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || ||||| ||||| |||||||| || || || |||| ||||| ||||| ||| || || Sbjct 596 ATGCCCTCTTTGTCCTGGATCTTGGCCTTGACATTATCAATAGTATCCGA-GCTCTCAAC 538 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||||||||||| || || | || ||||| || |||||||| Sbjct 537 TTCCAAGGTGATCGTCTTTCCAGTGAGGGTTTTAACAAAAATCTGCAT 490 Score = 158 bits (174), Expect = 3e-33 Identities = 174/229 (76%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || || || || ||||| | || ||| ||||| || |||||||| || Sbjct 489 ACCACCCCTCAAACGGAGGACGAGATGCAGGGTTGATTCCTTTTGAATATTGTAGTCTGC 430 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || || ||||| || || || || || |||||||| |||| |||||| |||||| ||| Sbjct 429 CAGGGTTCGGCCGTCTTCGAGCTGCTTTCCGGCAAATATCAGACGTTGCTGGTCAGGCGG 370 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 || || |||||||| |||||||| |||||||| | || || || ||||| ||| || | Sbjct 369 GATTCCTTCCTTGTCCTGGATCTTGGCTTTTACATTGTCAATGGTATCCGA-GCTCTCAA 311 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 |||| | || ||||||||||| |||| || || ||||| |||||||| Sbjct 310 CTTCCAACGTTATCGTCTTACCAGTCAGGGTTTTGACGAAGATCTGCAT 262 Score = 156 bits (172), Expect = 9e-33 Identities = 173/228 (76%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||| | ||| || || || ||||| || || |||||| || || |||||||||||| Sbjct 944 CCACCTCTCAGACGGAGGACAAGATGCAAGGTAGATTCTTTCTGAATATTGTAGTCAGCA 885 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || |||||||| || || ||||| || |||||||||| || || |||||| || Sbjct 884 AGGGTTCGGCCATCTTCGAGCTGTTTTCCAGCAAAGATCAGGCGCTGCTGGTCAGGGGGG 825 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || || |||||||| || ||||| || || || | ||||| ||||||| |||| || || Sbjct 824 ATGCCTTCCTTGTCCTGTATCTTAGCCTTCACATTGTCGATGGTGTCCG-AGCTCTCCAC 766 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||| | ||| || |||||||| || | || || || || |||||||| Sbjct 765 TTCCAAAGTAATGGTCTTACCTGTTAGGGTTTTGACAAAGATCTGCAT 718 >seq34320 Length=242 Score = 145 bits (160), Expect = 2e-29 Identities = 149/192 (78%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 282912 TTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATC 282971 || |||||||||||||| || | || ||||||||||| || || || || || |||||| Sbjct 1 TTCTGGATGTTGTAGTCGGCCAAGGTACGGCCATCCTCGAGCTGCTTGCCAGCGAAGATC 60 Query 282972 AAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCG 283031 | | || ||||| ||| || || |||||||| |||||||| || || ||| | ||| Sbjct 61 AGCCTCTGCTGGTCCGGCGGGATGCCTTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCG 120 Query 283032 ATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAA 283090 || |||| || |||| ||||| ||||||||||| ||||| || || | ||||| ||||| Sbjct 121 ATGGTGT-CGGAGCTCTCGACCTCGAGAGTGATGGTCTTGCCGGTGAGGGTCTTGACGAA 179 Query 283091 TATCTGCATTTT 283102 |||||||| || Sbjct 180 GATCTGCATCTT 191 >seq20474 Length=655 Score = 145 bits (160), Expect = 2e-29 Identities = 173/232 (75%), Gaps = 2/232 (1%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||| | || || || ||||| || | |||| || || ||||| ||||||||||| Sbjct 325 ACCACCCCTCAACCGGAGGACCAGGTGGAGCGTGGACTCCTTCTGGATATTGTAGTCAGC 384 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 | ||||||||||| || || || || || || ||||| | | || ||||| || Sbjct 385 CAAGGTGCGGCCATCTTCAAGCTGCTTACCAGCGAAGATGAGCCTCTGCTGGTCCGGGGG 444 Query 282992 AATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGA 283050 || ||||||||||| |||||||| | ||||| ||||||| |||| || |||| |||| Sbjct 445 GATTCCCTCCTTGTCCTGGATCTTGGACTTTACATTATCGATTGTGT-CGGAGCTCTCGA 503 Query 283051 CTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCATTTT 283102 | || || ||||| ||||| || || | ||||||||||| || ||||| || Sbjct 504 CCTCAAGGGTGATGGTCTTGCCGGTAAGGGTCTTAACGAAGATTTGCATCTT 555 Score = 134 bits (148), Expect = 3e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 || || | ||| ||||| || || || | ||| || || || ||||| ||||| || Sbjct 98 CCTCCCCTCAGACGAAGGACAAGGTGGAGGGTGGACTCCTTCTGAATGTTATAGTCGGCC 157 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 | ||||||||||| || || || ||||| |||||||| | | || ||||| || Sbjct 158 AAGGTGCGGCCATCTTCGAGCTGCTTCCCAGCAAAGATGAGCCTCTGCTGGTCTGGTGGG 217 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || |||||||||||||||||||| || || || | || || || | || |||| || || Sbjct 218 ATTCCCTCCTTGTCTTGGATCTTGGCCTTAACATTGTCAATTGTAT-CGGAGCTCTCTAC 276 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 ||||||||||| |||||||| || | ||||| || || |||||||| Sbjct 277 CTCGAGAGTGATTGTCTTACCAGTGAGGGTCTTCACAAAAATCTGCAT 324 >seq25614 Length=477 Score = 140 bits (154), Expect = 7e-28 Identities = 134/169 (79%), Gaps = 2/169 (1%) Strand=Plus/Plus Query 282908 TTCTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAA 282967 |||||| ||||||||||| || ||||| || ||||| ||||| || || || || || || Sbjct 307 TTCTTTCTGGATGTTGTAATCGGCAAGGGTTCGGCCGTCCTCAAGCTGCTTTCCTGCGAA 366 Query 282968 GATCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGT 283027 ||||| ||| || ||||| || || || |||||||| |||||||| ||||| || | Sbjct 367 GATCAGACGCTGCTGGTCGGGGGGGATCCCTTCCTTGTCCTGGATCTTAGCTTTAACATT 426 Query 283028 ATCGATAGTGTCCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGT 283075 || || ||||| | |||| ||||||||||||||||| |||||||| || Sbjct 427 GTCAATGGTGTCAG-AGCTCTCGACTTCGAGAGTGATGGTCTTACCGGT 474 >seq32362 Length=298 Score = 138 bits (152), Expect = 2e-27 Identities = 169/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || | || || || | || ||| || |||||||| || || || Sbjct 232 CCACCACGCAGACGCAAGACAAGGTGAAGTGTAGATTCCTTCTGGATGTTATAATCGGCC 173 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || |||||||| || ||||| || ||||| || | | || || ||| ||| Sbjct 172 AGAGTTCGCCCATCCTCCAGCTGTTTACCAGCAAATATGAGCCTCTGCTGATCAGGTGGA 113 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCT-TCGAC 283051 || || |||||||| || || || ||||||||| |||| || || || || ||| || || Sbjct 112 ATCCCTTCCTTGTCCTGAATTTTCGCTTTTACGTTATCAATCGTATCGGA-GCTCTCAAC 54 Query 283052 TTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGCAT 283099 || || ||||| ||||| || ||||| ||||| || ||||||||||| Sbjct 53 CTCCAGTGTGATAGTCTTGCCTGTCAACGTCTTCACAAATATCTGCAT 6 >seq26026 Length=465 Score = 132 bits (146), Expect = 1e-25 Identities = 165/226 (73%), Gaps = 0/226 (0%) Strand=Plus/Minus Query 301321 TTTATGTTCATCACCGGCGGCGTTTCAAGTTCATTGGGGAAAGGCCTCGCTGCTGCGAGT 301380 || || ||| |||| || || ||| |||||||||||||||| |||| | || Sbjct 240 TTCATCTTCGTCACGGGTGGTGTTGTTTCTTCATTGGGGAAAGGCATCGCCTCGGCATCC 181 Query 301381 ATCGCCAGTTTACTAGAGAGGCGATGCTTAAAGATAGCGATGCTTAAAATGGACCCCTAT 301440 | || | || ||| ||| || | ||| | ||||||| ||| |||| || || Sbjct 180 TTGGCGGCAATCCTGGAGGCGCGGGGCCTGAAGGTCACGATGCTCAAACTGGATCCGTAC 121 Query 301441 ATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACATGGAGAAGTGTTCGTGACGGAT 301500 ||||||||||||||||| || ||||||||| || ||||| || |||||||| || | Sbjct 120 ATCAACGTCGATCCGGGCACCATGAGCCCGTTCCAGCATGGTGAGGTGTTCGTCACCCAC 61 Query 301501 GATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCA 301546 ||||| || || || || || ||||||||||||||||| ||||||| Sbjct 60 GATGGCGCCGAGACTGACCTCGATCTGGGGCACTACGAGCGTTTCA 15 >seq2166 Length=5462 Score = 131 bits (144), Expect = 4e-25 Identities = 145/191 (76%), Gaps = 2/191 (1%) Strand=Plus/Plus Query 282910 CTTTTTGGATGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGA 282969 |||| |||||||||||||| | |||||| ||||||||||| || || || |||||||| | Sbjct 774 CTTTCTGGATGTTGTAGTCCGAAAGCGTTCGGCCATCCTCGAGCTGCTTGCCGGCAAAAA 833 Query 282970 TCAAACGTTGTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTT-TGCTTTTACGGTA 283028 ||| || || |||||| ||||||||| ||||| || ||||| || ||| || || | Sbjct 834 TCAGGCGCTGCTGGTCAGGCGGAATACCTTCCTTTTCCTGGATTTTCTGC-TTGACATTG 892 Query 283029 TCGATAGTGTCCGAAGCTTCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACG 283088 || || ||| || | || || || | ||||| ||||| || |||| ||||| || Sbjct 893 TCAATGCAGTCGGACGGCTCCACGTCCAACGTGATGGTCTTGCCGGTCAGGGTCTTCACA 952 Query 283089 AATATCTGCAT 283099 || |||||||| Sbjct 953 AAGATCTGCAT 963 >seq34564 Length=234 Score = 127 bits (140), Expect = 4e-24 Identities = 139/182 (76%), Gaps = 2/182 (1%) Strand=Plus/Minus Query 282919 TGTTGTAGTCAGCAAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTT 282978 |||||||||| ||||| || | || ||||| || || || || |||||||| | | | Sbjct 234 TGTTGTAGTCCGCAAGGGTCCTCCCGTCCTCGAGCTGCTTACCCGCAAAGATAAGCCTCT 175 Query 282979 GTTGGTCACCCGGAATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGT 283038 | ||||| || || ||||||||||| |||||||| || || ||| ||||||| |||| Sbjct 174 GCTGGTCCGGAGGGATGCCCTCCTTGTCCTGGATCTTGGCCTTCACGTTATCGATGGTGT 115 Query 283039 CCGAAGCT-TCGACTTCGAGAGTGATCGTCTTACCCGTCAAAGTCTTAACGAATATCTGC 283097 ||| |||| || || ||||| ||||| ||||| || || | ||||| || || |||||| Sbjct 114 CCG-AGCTCTCCACCTCGAGGGTGATGGTCTTCCCGGTGAGGGTCTTGACAAAGATCTGC 56 Query 283098 AT 283099 || Sbjct 55 AT 54 >seq27836 Length=415 Score = 116 bits (128), Expect = 8e-21 Identities = 135/182 (74%), Gaps = 0/182 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| || || || ||||| || | || ||| || || || ||||| || || Sbjct 184 CCACCACGGAGACGGAGCACCAGGTGAAGGGTCGATTCCTTCTGAATATTGTAATCGGCC 125 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || || ||||| || || || || |||||||||||||| | || |||||| ||| Sbjct 124 AGAGTACGACCATCTTCCAGCTGCTTACCGGCAAAGATCAACCTCTGCTGGTCAGGTGGA 65 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGAAGCTTCGACT 283052 || ||||||||||| |||||||| || || || | || || |||||||| ||| ||| Sbjct 64 ATTCCCTCCTTGTCCTGGATCTTAGCCTTCACATTGTCAATGGTGTCCGAGCTTTCCACT 5 Query 283053 TC 283054 || Sbjct 4 TC 3 >seq15490 Length=911 Score = 116 bits (128), Expect = 8e-21 Identities = 102/127 (80%), Gaps = 0/127 (0%) Strand=Plus/Plus Query 301420 ATGCTTAAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAACAT 301479 ||| | ||| |||| || || ||||||||||||||||| || ||||||||| || ||| Sbjct 743 ATGATGAAACTGGATCCGTACATCAACGTCGATCCGGGCACCATGAGCCCGTTCCAGCAT 802 Query 301480 GGAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAA 301539 || || |||||||| || | ||||| || || || || || ||||||||||||||||| Sbjct 803 GGTGAGGTGTTCGTCACCCACGATGGCGCCGAGACTGACCTCGATCTGGGGCACTACGAG 862 Query 301540 CGTTTCA 301546 ||||||| Sbjct 863 CGTTTCA 869 >seq1527 Length=6971 Score = 116 bits (128), Expect = 8e-21 Identities = 263/390 (67%), Gaps = 19/390 (5%) Strand=Plus/Plus Query 301406 GCTTAAAGATAGCGATGCTTAAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGA 301465 ||||||| | | ||| |||||||||| || || || || |||||||||||||| |||| Sbjct 3297 GCTTAAAAGTCACAATGGTTAAAATGGATCCTTACATTAATGTCGATCCGGGGACAATGA 3356 Query 301466 GCCCGACTCAACATGGAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATC 301525 | || |||||||| ||||| || || || || |||||||| ||||| ||||| || Sbjct 3357 GTCCTTTCCAACATGGTGAAGTTTTTGTCACAGAGGATGGTGCCGAAACTGATCTAGACT 3416 Query 301526 TGGGGCACTACGAACGTTTC--ACTTC-------ATTAACCCTTAAGCGTGAAAGTAATT 301576 |||| | |||||||||||| || || | | ||| || | |||| ||| | Sbjct 3417 TGGGTTATTACGAACGTTTCTTACGTCGTGCGAAAATGACC---AAAC-TGAA--TAACT 3470 Query 301577 TTACGACTGGCCAAGTTTATTTAAAAGTTATCGAAAATGAACGCGAAGGTAGCTATCTCG 301636 |||| | ||| | || ||| | | ||| | | || ||||| ||| ||| | | Sbjct 3471 TTACAAGTGGTCGTGTATATCAAGATGTTCTAAATAAAGAACGTCGTGGTGACTACTTAG 3530 Query 301637 GAAAGACGGTGCAAGTTGTTCCCCACATCACCGATGAAATCAAAAGAAGAATTCACATTG 301696 | ||||| |||||| |||| || || || || | || ||| | | | || | | Sbjct 3531 GTGGTACGGTTCAAGTTATTCCACATATTACTGACAATATTAAAGAACGCGT--ACTTCG 3588 Query 301697 CG--GCTGAAAAATCAGATATACTTATTGGAGAAATTGGAGGAACGGTCGGAGATATCGA 301754 || | |||| | || | || | || ||||| || ||||| || |||||||| Sbjct 3589 CGCAGGTGAAGGTTACGACGTTGCAATCGTTGAGATTGGTGGTACGGTTGGTGATATCGA 3648 Query 301755 ATCGCTTCCTTTTATAGAAGCGATTCGTCA 301784 ||| ||||| ||||| ||| | | ||||| Sbjct 3649 ATCACTTCCATTTATGGAATCAGTCCGTCA 3678 >seq31848 Length=311 Score = 109 bits (120), Expect = 1e-18 Identities = 126/170 (74%), Gaps = 0/170 (0%) Strand=Plus/Minus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 ||||||||||| || | || || || | || ||| || |||||||| || || || Sbjct 182 CCACCACGCAGACGCAAGACAAGGTGGAGGGTTGATTCCTTCTGGATGTTATAATCGGCG 123 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || || ||||||||||| || || |||||||||||||| | | || || || ||| Sbjct 122 AGTGTTCGGCCATCCTCCAGCTGCTTCCCGGCAAAGATGAGTCTCTGCTGATCTGGAGGA 63 Query 282993 ATACCCTCCTTGTCTTGGATCTTTGCTTTTACGGTATCGATAGTGTCCGA 283042 ||||| ||||||||||| ||||| || || ||| |||| || || || || Sbjct 62 ATACCTTCCTTGTCTTGAATCTTAGCCTTCACGTTATCAATCGTATCAGA 13 >seq15722 Length=896 Score = 109 bits (120), Expect = 1e-18 Identities = 101/128 (79%), Gaps = 0/128 (0%) Strand=Plus/Minus Query 301418 CGATGCTTAAAATGGACCCCTATATCAACGTCGATCCGGGGACGATGAGCCCGACTCAAC 301477 ||||| | ||| |||||||||| ||||||||||| ||||| || ||||||||| || | Sbjct 728 CGATGATGAAACTGGACCCCTACATCAACGTCGACCCGGGCACCATGAGCCCGTTCCAGC 669 Query 301478 ATGGAGAAGTGTTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACG 301537 | || || |||| ||| || || ||||| || || ||||| |||||||| || || |||| Sbjct 668 ACGGCGAGGTGTACGTCACCGACGATGGCGCCGAGACCGACCTGGATCTTGGCCATTACG 609 Query 301538 AACGTTTC 301545 | || ||| Sbjct 608 AGCGCTTC 601 >seq19291 Length=708 Score = 107 bits (118), Expect = 4e-18 Identities = 96/118 (81%), Gaps = 2/118 (2%) Strand=Plus/Plus Query 301430 TGGACCCCTATATCAACGTCGATCCGGGGACGATGA-GCCCGACTCAACATGGAGAAGTG 301488 ||||||| || |||||||| || ||||| || ||| |||| | || || || |||||| Sbjct 65 TGGACCCGTACATCAACGTGGACCCGGGCACCATGTCGCCCTTC-CAGCACGGTGAAGTG 123 Query 301489 TTCGTGACGGATGATGGTGCTGAAACCGATCTGGATCTGGGGCACTACGAACGTTTCA 301546 |||||||| || ||||| || || ||||||||||| ||||| |||||||| ||||||| Sbjct 124 TTCGTGACCGACGATGGCGCAGAGACCGATCTGGACCTGGGCCACTACGAGCGTTTCA 181 >seq79 Length=34262 Score = 91.5 bits (100), Expect = 3e-13 Identities = 97/128 (76%), Gaps = 0/128 (0%) Strand=Plus/Plus Query 316162 TCTTTGTCTTCACCGGAAGCATAACGCCATTGGATGTACTGATTGGGCGTCATGTCAAGA 316221 || ||||| ||||| || ||||||| || ||||||||||| | |||| || | | Sbjct 19907 TCCTTGTCCTCACCAGACTGGAAACGCCACTGAATGTACTGATTCGCCGTCTCATCCAAA 19966 Query 316222 TGATCCTCGATGTGGTGGAAAGCGTGCTGTGCCACGTAAGCAAGACGCATATTTGGATGC 316281 ||| ||| |||||||||||||||||||| || || || |||| |||||| || ||| Sbjct 19967 TGAGACTCAATGTGGTGGAAAGCGTGCTGAGCAACATACGCAAAACGCATCGAAGGGTGC 20026 Query 316282 TTCCAAAC 316289 ||||| || Sbjct 20027 TTCCACAC 20034 >seq31347 Length=324 Score = 89.7 bits (98), Expect = 1e-12 Identities = 103/139 (74%), Gaps = 0/139 (0%) Strand=Plus/Plus Query 282873 CCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGCA 282932 |||||||| ||||| || || || || | || ||| || || |||||||| || ||| Sbjct 186 CCACCACGGAGGCGGAGGACAAGGTGGAGGGTCGATTCCTTCTGAATGTTGTAATCCGCA 245 Query 282933 AGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGGA 282992 || ||||| || ||||| || || ||||| || ||||| | | || ||||| ||| Sbjct 246 AGGGTGCGCCCGTCCTCGAGCTGCTTCCCAGCGAAGATAAGCCTCTGCTGGTCCGGCGGG 305 Query 282993 ATACCCTCCTTGTCTTGGA 283011 || ||||||||||| |||| Sbjct 306 ATCCCCTCCTTGTCCTGGA 324 >seq121 Length=30622 Score = 87.8 bits (96), Expect = 4e-12 Identities = 95/126 (75%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 282872 ACCACCACGCAGGCGAAGTACCAGATGTAACGTGCTTTCTTTTTGGATGTTGTAGTCAGC 282931 |||||||||||| || || || || || ||||| ||||| ||||||||||| || || Sbjct 21083 ACCACCACGCAGACGCAGCACGAGGTGCAACGTCGACTCTTTCTGGATGTTGTAATCCGC 21142 Query 282932 AAGCGTGCGGCCATCCTCTAGTTGTTTCCCGGCAAAGATCAAACGTTGTTGGTCACCCGG 282991 || | ||| ||||| || || || || || || ||||||| ||| || |||||| || Sbjct 21143 CAGAGAGCGACCATCTTCCAGCTGCTTGCCAGCGAAGATCAGACGCTGCTGGTCAGGGGG 21202 Query 282992 AATACC 282997 ||| || Sbjct 21203 AATTCC 21208 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1046262574174506