Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= NC_033423.1 Length=208501 Score E Sequences producing significant alignments: (Bits) Value seq2111 98.7 1e-15 >seq2111 Length=5547 Score = 98.7 bits (108), Expect = 1e-15 Identities = 113/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 50712 TTATCCTGTCAATGTTATCAAAGATCAGCTGATATGGGTTTAGGCGTTCCTTTCAACGTA 50771 |||||||| || | ||||||||| || ||||| |||||| || ||||| ||| || Sbjct 3263 TTATCCTGCCAGTTATATCAAAGAAGCGCCGATATCTTTTTAGGAGTGCCTTTTAACATA 3322 Query 50772 GCTTCTTACGCTTTATTAACGTATTTGATCGCTCAAGCCGTCGATATGAAACCGGGAGAA 50831 || ||||| || ||||| || | |||| ||||| | |||| | ||||||||||| Sbjct 3323 GCATCTTATGCATTATTGACATTGATGATTGCTCAGGTTTGCGATTTAAAACCGGGAGAT 3382 Query 50832 TTTATTCATACGTTAGGAGACGCTCATATTTA 50863 ||||| ||||| || || ||||| || || || Sbjct 3383 TTTATCCATACTTTTGGTGACGCGCACATCTA 3414 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 666778860180840