Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_001132.2 Length=161773 Score E Sequences producing significant alignments: (Bits) Value seq4347 114 1e-20 >seq4347 Length=93765 Score = 114 bits (126), Expect = 1e-20 Identities = 381/587 (65%), Gaps = 8/587 (1%) Strand=Plus/Plus Query 16956 ACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTAGAAA 17015 ||| ||| || ||||| ||||| || | ||||| || | ||| || ||||| || | Sbjct 72713 ACAGCAGGCAAGCGAAGTCGCAGTGGAGGCCCTCATCGCGCGAGATGAGCTCGTTCGAGA 72772 Query 17016 ATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGACCCAG 17075 | | | || ||||| || || ||||| | ||| || || | | |||||| || | Sbjct 72773 AGCTGAGGCCAGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGCAGAACGAGCCCG 72832 Query 17076 AAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCGTCTT 17135 | ||||| || ||||| |||| || ||||||| | || || || | | |||| | Sbjct 72833 AGAAGAAAATGCCCTCAACGGCAGCGAACGCGACAATGCGCTCAGCAAAAGCCGCG-CGG 72891 Query 17136 TGTTA--CGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTTTC 17193 | | || | ||| || || |||| | || || | || | ||| || || || Sbjct 72892 CGCGAGTCGCA-CCACTTGAGCGCCCAGTGCGCCTTCTTCTGCACGCATGGAATGGTCTC 72950 Query 17194 TATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGTAG 17253 ||||| | | | | || ||| |||| | || ||||| || ||||| || Sbjct 72951 GATGGCGCGGAGGAGGTGGTTCTTCTCCGTCTGGTCCTTGATGTACGTGTCAATGAGCAG 73010 Query 17254 GCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGGGC 17313 ||||| || ||||| |||||||| ||||| ||||| || || || ||||| || || Sbjct 73011 CGAGTACACCTCCGAGTGGATGTTCTCAATGGCGATCTGGAAGCCATAGAAGCAACGCGC 73070 Query 17314 TTCCGCTATTTGAACTTCCACGTAGAATCGTTC--CGCTAGATTTTCGTTCACGATGCCG 17371 || | | || || || | ||| |||| ||| || || ||||| ||||| ||| Sbjct 73071 CTCAGGAACCTGCACCTCGCTGCTGAA--GTTCATCGCGAGGTTCTCGTTGACGATACCG 73128 Query 17372 TCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAAGA 17431 |||||||| ||||| ||||| | | ||||| || || | |||| || || Sbjct 73129 TCGCTCGCCGCGAAGAACGCGAGGACGTGCTTGATAAAGTGGCGCTCGTTGTCCGTGAGG 73188 Query 17432 ACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAGCC 17491 || ||||||||| | || | | ||| | || |||| |||||| || || ||| Sbjct 73189 TTGCCCCAGTCCTTGAGGTCGTGCACGAGATCGATCTCCTCGGCGGTCCAGAAGCTCGCC 73248 Query 17492 ACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAA 17538 | ||||| || ||||| | ||| | || || | || || ||||| Sbjct 73249 TCGGCCTTCTTGTACATCTGCCACACCTCGTTCTCCTGGATCGGGAA 73295 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517487427874560