Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq5045 104 2e-17 seq2601 104 2e-17 >seq5045 Length=16147 Score = 104 bits (114), Expect = 2e-17 Identities = 410/631 (65%), Gaps = 13/631 (2%) Strand=Plus/Minus Query 18594 CGATACAATTTGCGA---AATGAATTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGG 18650 |||| |||| ||||| |||| ||||| || | || || ||||| || || ||| | Sbjct 9925 CGATTCAATCTGCGAGATAATGTTTTTCCGCTGCTCACGACCAAGCGCGTCTTCTGGCGC 9866 Query 18651 GCCGTCGTGGAAGAGTTGTTATGGTTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCC 18710 | |||| ||| ||| || | ||||| ||| | || ||| || |||| || | || Sbjct 9865 GGTGTCGCGGAGGAGCTGCTGTGGTTCATCAGTGGCGATACCAATGCCAA-GACATTGCA 9807 Query 18711 GCTAAAGA-TATACACATATGGGATATATACGGATCGAGCAAATTTCTAAATAGGAATGG 18769 | ||| ||| | || |||||| | ||||||| ||| ||| | || | || Sbjct 9806 GGACAAGGGTATCAAGATCTGGGATGGCAATGGATCGAAGGAATACCTAGAGAGCATCGG 9747 Query 18770 CTTCCATAAAAGACACACGGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTT 18829 | || | | | | || || || || || | || |||||||||||| | || || Sbjct 9746 CCTCGGACATCGCGAAGCTGGCGATCTCGGACCAGTGTATGGCTTCCAGTGGCGCCACTT 9687 Query 18830 TGGAGCGGAATATAAAGACTGT-CAATCAAACTATTTACAGCAAGGAATCGATCAGCT-G 18887 |||||| | || | ||| | || | |||| | || ||| |||||||||| | Sbjct 9686 TGGAGCCAAGTACAC-GACGATGCACGCCGACTACTCTGGCCAGGGAGTCGATCAGCTCG 9628 Query 18888 CAAACTGTTATAGATACAATTAAAACAAACCCAGAAAGC-CGACGAATGATTATATCGTC 18946 | | || || | | | | || || ||||| ||| | || || || || || ||| | Sbjct 9627 CGGAG-GTGATCCACAAACTCAAGACGAACCC-GAACGATCGGCGCATCATCATGTCGGC 9570 Query 18947 TTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTT 19006 ||||| || ||| || |||| || || || || |||| ||| || ||||| Sbjct 9569 ATGGAACCCTGCGGACCTCAAGGAGATGGCGCTGCCGCCGTGCCACATGTTCTGCCAGTT 9510 Query 19007 TTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCT 19066 ||||||||| || ||||| | ||||| || | ||||| | || | |||||||| || Sbjct 9509 TTACGTTGCGAATGGTGAGCTCTCCTGTCAGATGTACCAACGCTCAGCAGATATGGGTCT 9450 Query 19067 TGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTAC-CTACATAGTAGCGCATGTTA 19125 || || || |||||||| || | || || || | || | || | || ||||| || | Sbjct 9449 CGGCGTGCCATTCAACATCGCGAGCTACGCGCTGTTGACGCGAC-TCGTCGCGCAGGTCA 9391 Query 19126 CAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATC 19185 |||| || | || || || || || || || || || || || || ||| || | | Sbjct 9390 CAGGGCTGCGTGCTGGCGAGTTCATCCACACGATTGGTGACGCGCACATCTACCTGGACC 9331 Query 19186 ATATAGATGCTTTAAAAGTGCAGCTAGCTCG 19216 || | || | | || |||||||| | ||| Sbjct 9330 ATGTCGAGCCCCTCAAGGTGCAGCTTGGTCG 9300 >seq2601 Length=2056 Score = 104 bits (114), Expect = 2e-17 Identities = 410/631 (65%), Gaps = 13/631 (2%) Strand=Plus/Minus Query 18594 CGATACAATTTGCGA---AATGAATTTCCTCTTTTAACTACAAAGCGTGTTTTTTGGAGG 18650 |||| |||| ||||| |||| ||||| || | || || ||||| || || ||| | Sbjct 1552 CGATTCAATCTGCGAGATAATGTTTTTCCGCTGCTCACGACCAAGCGCGTCTTCTGGCGC 1493 Query 18651 GCCGTCGTGGAAGAGTTGTTATGGTTTATCCGCGGGTCAACCGATTCCAAAGAACTCGCC 18710 | |||| ||| ||| || | ||||| ||| | || ||| || |||| || | || Sbjct 1492 GGTGTCGCGGAGGAGCTGCTGTGGTTCATCAGTGGCGATACCAATGCCAA-GACATTGCA 1434 Query 18711 GCTAAAGA-TATACACATATGGGATATATACGGATCGAGCAAATTTCTAAATAGGAATGG 18769 | ||| ||| | || |||||| | ||||||| ||| ||| | || | || Sbjct 1433 GGACAAGGGTATCAAGATCTGGGATGGCAATGGATCGAAGGAATACCTAGAGAGCATCGG 1374 Query 18770 CTTCCATAAAAGACACACGGGGGACCTTGGCCCCATTTACGGCTTCCAGTGGAGACATTT 18829 | || | | | | || || || || || | || |||||||||||| | || || Sbjct 1373 CCTCGGACATCGCGAAGCTGGCGATCTCGGACCAGTGTATGGCTTCCAGTGGCGCCACTT 1314 Query 18830 TGGAGCGGAATATAAAGACTGT-CAATCAAACTATTTACAGCAAGGAATCGATCAGCT-G 18887 |||||| | || | ||| | || | |||| | || ||| |||||||||| | Sbjct 1313 TGGAGCCAAGTACAC-GACGATGCACGCCGACTACTCTGGCCAGGGAGTCGATCAGCTCG 1255 Query 18888 CAAACTGTTATAGATACAATTAAAACAAACCCAGAAAGC-CGACGAATGATTATATCGTC 18946 | | || || | | | | || || ||||| ||| | || || || || || ||| | Sbjct 1254 CGGAG-GTGATCCACAAACTCAAGACGAACCC-GAACGATCGGCGCATCATCATGTCGGC 1197 Query 18947 TTGGAATCCAAAGGATATCCCCTTAATGGTACTACCTCCATGTCACACGTTATGTCAGTT 19006 ||||| || ||| || |||| || || || || |||| ||| || ||||| Sbjct 1196 ATGGAACCCTGCGGACCTCAAGGAGATGGCGCTGCCGCCGTGCCACATGTTCTGCCAGTT 1137 Query 19007 TTACGTTGCAAACGGTGAATTATCCTGCCAAGTATACCAGAGATCGGGGGATATGGGCCT 19066 ||||||||| || ||||| | ||||| || | ||||| | || | |||||||| || Sbjct 1136 TTACGTTGCGAATGGTGAGCTCTCCTGTCAGATGTACCAACGCTCAGCAGATATGGGTCT 1077 Query 19067 TGGGGTACCGTTCAACATTGCTGGATATGCACTTCTTAC-CTACATAGTAGCGCATGTTA 19125 || || || |||||||| || | || || || | || | || | || ||||| || | Sbjct 1076 CGGCGTGCCATTCAACATCGCGAGCTACGCGCTGTTGACGCGAC-TCGTCGCGCAGGTCA 1018 Query 19126 CAGGACTTAAAACCGGAGATTTAATTCATACAATGGGGGATGCACATATTTACTTGAATC 19185 |||| || | || || || || || || || || || || || || ||| || | | Sbjct 1017 CAGGGCTGCGTGCTGGCGAGTTCATCCACACGATTGGTGACGCGCACATCTACCTGGACC 958 Query 19186 ATATAGATGCTTTAAAAGTGCAGCTAGCTCG 19216 || | || | | || |||||||| | ||| Sbjct 957 ATGTCGAGCCCCTCAAGGTGCAGCTTGGTCG 927 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399460218356640