Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_001650.2 Length=184439 Score E Sequences producing significant alignments: (Bits) Value seq5045 235 6e-57 seq2601 235 6e-57 >seq5045 Length=16147 Score = 235 bits (260), Expect = 6e-57 Identities = 509/745 (68%), Gaps = 15/745 (2%) Strand=Plus/Plus Query 145532 CCAATTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAA 145591 ||| ||| |||| |||| |||| ||| | | ||||| | |||||| |||||| ||| Sbjct 9163 CCACTTATACCGACATCGCCATCTTGATCGTGCCATGGGGCTTGTAGCCTTCCAGCTCAA 9222 Query 145592 AGTCCTCCGCCCTGAAGTCATCTATG-TCCTCCACCCGCCTCAG--GATCCTGAGCCTGG 145648 ||||||| || ||||| ||| | || | || | |||| | ||| | | Sbjct 9223 AGTCCTCAAAGACAAACTCATCAATGCTGCTGGTCTTTTCTGGGTTGATCTTCAGCGTCG 9282 Query 145649 GAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGA 145708 | || | || || | | ||||| | ||| |||||||| || |||| ||||||| Sbjct 9283 GGAAAGTTCGCGGAGTGCGACCAAGCTGCACCTTGAGGGGCTCGACATGGTCCAGGTAGA 9342 Query 145709 CGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCC-GTGAGGTGGGCG 145767 ||||||||| || | ||||||||| || || | | || |||| |||| || ||| Sbjct 9343 TGTGCGCGTCACCAATCGTGTGGATGAACTCGCCAG-CACGCAGCCCTGTGACCTGCGCG 9401 Query 145768 ACCATGTAG-GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTC 145826 || | || | |||| ||| | |||||| || |||||||| ||||| || || ||||| || Sbjct 9402 ACGA-GTCGCGTCAACAGCGCGTAGCTCGCGATGTTGAATGGCACGCCGAGACCCATATC 9460 Query 145827 CCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAG 145886 | ||||| ||||||| ||| ||||||||||| || ||| ||||| |||||||| | Sbjct 9461 TGCTGAGCGTTGGTACATCTGACAGGAGAGCTCACCATTCGCAACGTAAAACTGGCAGAA 9520 Query 145887 GAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGAC 145946 | |||||| |||||||| ||||| | |||||||| |||||||| || | | || Sbjct 9521 CATGTGGCACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGAT 9580 Query 145947 GAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCA 146005 || | || | || | |||||| |||||| | |||| ||| |||||| || | Sbjct 9581 GATGCGCC-GATCGTTCGGGTTCGTCTTGAGTTTGTGGATCACCTCCGCGAGCTGATCGA 9639 Query 146006 CGCCCTGCCCCCGGTAATCTGTCTTGGA--GTCCACGTACGCGGCCCCGAAGTGCCTCCA 146063 | ||||| || ||| || | | || | || | |||| ||| || ||||| | ||| Sbjct 9640 CTCCCTGGCCAGAGTAGTC-GGCGTGCATCGT-CGTGTACTTGGCTCCAAAGTGGCGCCA 9697 Query 146064 CTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGC 146123 |||||| || || || || || || || || | || | || || || ||| | | Sbjct 9698 CTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCGCGATGTCCGAGGCCGATGCTCTC 9757 Query 146124 GAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCT-CGCGGAGAGCTCAT 146182 ||| | ||| || || ||| | ||||||||||||| ||| | | | | || | Sbjct 9758 TAGGTATTCCTTCGATCCATTGCCATCCCAGATCTTGATACCCTTGTCCTGCAATGTC-T 9816 Query 146183 TGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGA 146242 ||| | || || ||||||||||| |||||||| || ||| || | |||||||| Sbjct 9817 TGGCATTGGTATCGCCACTGATGAACCACAGCAGCTCCTCCGCGACACCGCGCCAGAAGA 9876 Query 146243 CCCTCTTGGTGGTCAGCAGGGGGAA 146267 | | |||||| || ||||| || || Sbjct 9877 CGCGCTTGGTCGTGAGCAGCGGAAA 9901 >seq2601 Length=2056 Score = 235 bits (260), Expect = 6e-57 Identities = 509/745 (68%), Gaps = 15/745 (2%) Strand=Plus/Plus Query 145532 CCAATTAGACCGCCATCTCCATGGGGATGGCCGCGTGGGGGTGGTAGCCCTCCAGCGCAA 145591 ||| ||| |||| |||| |||| ||| | | ||||| | |||||| |||||| ||| Sbjct 790 CCACTTATACCGACATCGCCATCTTGATCGTGCCATGGGGCTTGTAGCCTTCCAGCTCAA 849 Query 145592 AGTCCTCCGCCCTGAAGTCATCTATG-TCCTCCACCCGCCTCAG--GATCCTGAGCCTGG 145648 ||||||| || ||||| ||| | || | || | |||| | ||| | | Sbjct 850 AGTCCTCAAAGACAAACTCATCAATGCTGCTGGTCTTTTCTGGGTTGATCTTCAGCGTCG 909 Query 145649 GAAAGGGCCGGGGGCTCCTGGTCAGCTGGAGCTTCAGGGGCTCCACGTGGTTGAGGTAGA 145708 | || | || || | | ||||| | ||| |||||||| || |||| ||||||| Sbjct 910 GGAAAGTTCGCGGAGTGCGACCAAGCTGCACCTTGAGGGGCTCGACATGGTCCAGGTAGA 969 Query 145709 CGTGCGCGTCCCCCAGGACGTGGATGAAGTCCCCGGGCTCGAGGCCC-GTGAGGTGGGCG 145767 ||||||||| || | ||||||||| || || | | || |||| |||| || ||| Sbjct 970 TGTGCGCGTCACCAATCGTGTGGATGAACTCGCCAG-CACGCAGCCCTGTGACCTGCGCG 1028 Query 145768 ACCATGTAG-GTCAGCAGGGAGTAGCTGGCTATGTTGAAGGGCACCCCCAGCCCCATGTC 145826 || | || | |||| ||| | |||||| || |||||||| ||||| || || ||||| || Sbjct 1029 ACGA-GTCGCGTCAACAGCGCGTAGCTCGCGATGTTGAATGGCACGCCGAGACCCATATC 1087 Query 145827 CCCCGAGCGCTGGTACAGCTGGCAGGAGAGCTCCCCGCCCGCCACGTAGAACTGGCACAG 145886 | ||||| ||||||| ||| ||||||||||| || ||| ||||| |||||||| | Sbjct 1088 TGCTGAGCGTTGGTACATCTGACAGGAGAGCTCACCATTCGCAACGTAAAACTGGCAGAA 1147 Query 145887 GAGGTGGCAGGGCGGCAGGGCCATGGCGGGCAGGTCCGCCGGGTTCCAGGCGGTGAGGAC 145946 | |||||| |||||||| ||||| | |||||||| |||||||| || | | || Sbjct 1148 CATGTGGCACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGAT 1207 Query 145947 GAGCCTCCTGCTC-TCGGGGTTCCTCTTGATCTCCCCTATCAGGTCCCTGAGCTGGTCCA 146005 || | || | || | |||||| |||||| | |||| ||| |||||| || | Sbjct 1208 GATGCGCC-GATCGTTCGGGTTCGTCTTGAGTTTGTGGATCACCTCCGCGAGCTGATCGA 1266 Query 146006 CGCCCTGCCCCCGGTAATCTGTCTTGGA--GTCCACGTACGCGGCCCCGAAGTGCCTCCA 146063 | ||||| || ||| || | | || | || | |||| ||| || ||||| | ||| Sbjct 1267 CTCCCTGGCCAGAGTAGTC-GGCGTGCATCGT-CGTGTACTTGGCTCCAAAGTGGCGCCA 1324 Query 146064 CTGGAACCCGTAGACGGGCCCCAGGTCCCCGGGCTCCCTGTGCCCCAGCCCGGCCCGGGC 146123 |||||| || || || || || || || || | || | || || || ||| | | Sbjct 1325 CTGGAAGCCATACACTGGTCCGAGATCGCCAGCTTCGCGATGTCCGAGGCCGATGCTCTC 1384 Query 146124 GAGGAAGTCCCGGGACCCGTTGGCGTCCCAGATCTTGACGCCCCT-CGCGGAGAGCTCAT 146182 ||| | ||| || || ||| | ||||||||||||| ||| | | | | || | Sbjct 1385 TAGGTATTCCTTCGATCCATTGCCATCCCAGATCTTGATACCCTTGTCCTGCAATGTC-T 1443 Query 146183 TGGAGTCCGTGGACCCCCTGATGAACCAGAGCAGCTCTTCGAGGACCCCCCTCCAGAAGA 146242 ||| | || || ||||||||||| |||||||| || ||| || | |||||||| Sbjct 1444 TGGCATTGGTATCGCCACTGATGAACCACAGCAGCTCCTCCGCGACACCGCGCCAGAAGA 1503 Query 146243 CCCTCTTGGTGGTCAGCAGGGGGAA 146267 | | |||||| || ||||| || || Sbjct 1504 CGCGCTTGGTCGTGAGCAGCGGAAA 1528 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 590010475367680