Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_002686.2 Length=124784 Score E Sequences producing significant alignments: (Bits) Value seq5045 104 2e-17 seq2601 104 2e-17 >seq5045 Length=16147 Score = 104 bits (114), Expect = 2e-17 Identities = 305/464 (66%), Gaps = 12/464 (3%) Strand=Plus/Minus Query 20152 AAGATTTGG-AGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCG 20210 ||||| ||| | ||| ||||||| ||| ||| || | |||| || | | | || Sbjct 9793 AAGATCTGGGATGGCA-ATGGATCGAAGGAATACCTAGAGAGCATCGGCCTCGGACATCG 9735 Query 20211 TCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATA 20270 ||| || ||| | || || |||||||| || || ||| | || |||||||| | || Sbjct 9734 CGAAGCTGGCGATCTCGGACCAGTGTATGGCTTCCAGTGGCGCCACTTTGGAGCCAAGTA 9675 Query 20271 TGTTGAC-ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTA 20329 ||| ||| || | | || | ||| || ||||| ||||| | | || || Sbjct 9674 CAC-GACGATGCACGCCGACTACTCTGGCCAGGGAGTCGATCAGCTCGCGGAGGTGATCC 9616 Query 20330 ATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAG 20389 | | | || |||||||| ||||| | | || || | | || |||||| || | Sbjct 9615 ACAAACTCAAGACGAACCCGAACGATCGGCGCATCATCATGTCGGCATGGAACCCTGCGG 9556 Query 20390 ATGTGCCTTTA----ATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCT 20445 | ||| | ||||| |||| || || || ||| | ||||| ||||||||||| Sbjct 9555 A----CCTCAAGGAGATGGCGCTGCCGCCGTGCCACATGTTCTGCCAGTTTTACGTTGCG 9500 Query 20446 AATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCT 20505 ||| ||| | || ||||| ||||| ||||| || || |||||||| || || || || Sbjct 9499 AATGGTGAGCTCTCCTGTCAGATGTACCAACGCTCAGCAGATATGGGTCTCGGCGTGCCA 9440 Query 20506 TTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAA 20565 ||||| || || || || |||||| | ||| | | || || || |||| | Sbjct 9439 TTCAACATCGCGAGCTACGCGCTGTTGACGCGACTCGTCGCGCAGGTCACAGGGCTGCGT 9380 Query 20566 ACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCT 20609 | || || || ||||||| || || |||||||| || ||||| Sbjct 9379 GCTGGCGAGTTCATCCACACGATTGGTGACGCGCACATCTACCT 9336 >seq2601 Length=2056 Score = 104 bits (114), Expect = 2e-17 Identities = 305/464 (66%), Gaps = 12/464 (3%) Strand=Plus/Minus Query 20152 AAGATTTGG-AGCGCACATGGATCTAAGCAATTTTTACACAGCAATGGATTTGACAACCG 20210 ||||| ||| | ||| ||||||| ||| ||| || | |||| || | | | || Sbjct 1420 AAGATCTGGGATGGCA-ATGGATCGAAGGAATACCTAGAGAGCATCGGCCTCGGACATCG 1362 Query 20211 TCAAGAGGGGGATTTGGGTCCTGTGTATGGATTTCAATGGAGACATTTTGGAGCTGAATA 20270 ||| || ||| | || || |||||||| || || ||| | || |||||||| | || Sbjct 1361 CGAAGCTGGCGATCTCGGACCAGTGTATGGCTTCCAGTGGCGCCACTTTGGAGCCAAGTA 1302 Query 20271 TGTTGAC-ATGAACACAAATTATTTTGGACAAGGAGTAGATCAATTACAAAATGTTATTA 20329 ||| ||| || | | || | ||| || ||||| ||||| | | || || Sbjct 1301 CAC-GACGATGCACGCCGACTACTCTGGCCAGGGAGTCGATCAGCTCGCGGAGGTGATCC 1243 Query 20330 ATTTAATTAAAACGAACCCAAACGACAGAAGAATTATTTTATGCGCCTGGAACGCTAAAG 20389 | | | || |||||||| ||||| | | || || | | || |||||| || | Sbjct 1242 ACAAACTCAAGACGAACCCGAACGATCGGCGCATCATCATGTCGGCATGGAACCCTGCGG 1183 Query 20390 ATGTGCCTTTA----ATGGCTTTGCCTCCATGTCATATGCTATGCCAATTTTACGTTGCT 20445 | ||| | ||||| |||| || || || ||| | ||||| ||||||||||| Sbjct 1182 A----CCTCAAGGAGATGGCGCTGCCGCCGTGCCACATGTTCTGCCAGTTTTACGTTGCG 1127 Query 20446 AATAATGAATTGTCGTGTCAAATGTATCAACGATCCGCTGATATGGGACTGGGTGTTCCT 20505 ||| ||| | || ||||| ||||| ||||| || || |||||||| || || || || Sbjct 1126 AATGGTGAGCTCTCCTGTCAGATGTACCAACGCTCAGCAGATATGGGTCTCGGCGTGCCA 1067 Query 20506 TTCAATATTGCAAGTTATGCGCTGCTTACGTATATGATTGCACATGTTACAGATTTAAAA 20565 ||||| || || || || |||||| | ||| | | || || || |||| | Sbjct 1066 TTCAACATCGCGAGCTACGCGCTGTTGACGCGACTCGTCGCGCAGGTCACAGGGCTGCGT 1007 Query 20566 ACGGGTGACTTAGTCCACACCATAGGAGACGCGCATATTTACCT 20609 | || || || ||||||| || || |||||||| || ||||| Sbjct 1006 GCTGGCGAGTTCATCCACACGATTGGTGACGCGCACATCTACCT 963 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399140253425440