Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_002816.1 Length=123500 Score E Sequences producing significant alignments: (Bits) Value seq1220 131 1e-25 seq2702 125 6e-24 >seq1220 Length=9499 Score = 131 bits (144), Expect = 1e-25 Identities = 155/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||||||||| ||||||||| ||||||||||| ||| ||| |||| ||| Sbjct 242 ACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTGCGGCCGTCCTCC 183 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || || ||||| |||| ||||| ||||| || || | |||||||||||| | Sbjct 182 AGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCCTCCTTGTCCTGA 123 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||||| || | | |||| |||||| || | || ||||||||| Sbjct 122 ATCTTCTGCTTGACGTTGTCGATCGAGTCCGACGGCTCCACGTCGAGCGTGATCGTCTTG 63 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATG 45337 |||||||| |||||||| ||||| |||||| Sbjct 62 CCCGTCAGCGTCTTCACGAAGATCTGCATG 33 >seq2702 Length=56295 Score = 125 bits (138), Expect = 6e-24 Identities = 155/212 (73%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 45128 ACCAAGTGCAGCGTGCTCTCCTTCTGAATGTTGTAGTCGTTCAGTTGGCGATCGTCGTCC 45187 |||| ||| ||||| ||||||||| ||||||||||| || ||| |||| || Sbjct 26973 ACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCCTCG 26914 Query 45188 AGTTGTTTTCCGGCGAATATCAACCGCTGTTGGTCGGGAGGCACACCCTCCTTGTCCGCA 45247 || || || |||||||| |||| ||||| || || ||||| | |||||||||||| Sbjct 26913 AGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCCTGG 26854 Query 45248 ATTTTTTGCTTAACCGCCGCCACGCTGTCCCCACCCTCCACCTCCACGGTAATCGTCTTG 45307 || || ||||| || | | ||||||| | ||| || || | || ||||||||| Sbjct 26853 ATCTTCTGCTTGACATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTCTTG 26794 Query 45308 CCCGTCAGAGTCTTCACAAAGATTTGCATGTT 45339 || ||||||||||| || ||||| ||||| || Sbjct 26793 CCGGTCAGAGTCTTGACGAAGATCTGCATCTT 26762 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 395031903708832