Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_003401.1 Length=133719 Score E Sequences producing significant alignments: (Bits) Value seq5045 206 2e-48 seq2601 206 2e-48 >seq5045 Length=16147 Score = 206 bits (228), Expect = 2e-48 Identities = 326/461 (71%), Gaps = 6/461 (1%) Strand=Plus/Plus Query 20877 ATCTTCAGCCGCGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACG 20936 ||||||||| ||| || | ||||| || | | ||||| | | ||||| || || Sbjct 9270 ATCTTCAGCGTCGGGAAAGTTCGCGGAGTGCGACCAAGCTGCACCTTGAGGGGCTCGACA 9329 Query 20937 TGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCC 20996 |||| ||| | ||| |||||||| | ||||| | || || || | ||| || Sbjct 9330 TGGTCCAGGTAGATGTGCGCGTCACCAATCGTGTGGATGAACTCGCCAGCACGCAGCCCT 9389 Query 20997 GTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCG 21056 ||||| || |||| || ||||| || |||||||| |||||||| || || || ||| Sbjct 9390 GTGACCTGCGCGACGAGTCGCGTCAACAGCGCGTAGCTCGCGATGTTGAATGGCACGCCG 9449 Query 21057 AGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAA 21116 || ||||| || || || | ||||||| ||| ||||| ||||| || || |||||| Sbjct 9450 AGACCCATATCTGCTGAGCGTTGGTACATCTGACAGGAGAGCTCACCATTCGCAACGTAA 9509 Query 21117 AACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCAC 21176 ||||| || || | ||| || || || || |||||| | ||||||||| |||||||| Sbjct 9510 AACTGGCAGAACATGTGGCACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCAT 9569 Query 21177 GCGCACATAACGATGCGCCGATCGT--GGGGCCGCCTGTTAATTAGATCCACCACGTAAC 21234 || |||| | |||||||||||||| ||| || || | | || | | | ||| | | Sbjct 9570 GCCGACATGATGATGCGCCGATCGTTCGGGTTCGTCT-TGAGTTTG-TGGATCACCT-CC 9626 Query 21235 GC-AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCA 21293 || ||||| || || ||||| || ||||| ||||| | | |||||| || ||| Sbjct 9627 GCGAGCTGATCGACTCCCTGGCCAGAGTAGTCGGCGTGCATCGTCGTGTACTTGGCTCCA 9686 Query 21294 AAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCC 21334 || || | ||||||||| || ||||| || || |||||||| Sbjct 9687 AAGTGGCGCCACTGGAAGCCATACACTGGTCCGAGATCGCC 9727 >seq2601 Length=2056 Score = 206 bits (228), Expect = 2e-48 Identities = 326/461 (71%), Gaps = 6/461 (1%) Strand=Plus/Plus Query 20877 ATCTTCAGCCGCGGAAACGGACGCGGGGTCCTCCGCAGCTGAAGCAGCAGGGGATCAACG 20936 ||||||||| ||| || | ||||| || | | ||||| | | ||||| || || Sbjct 897 ATCTTCAGCGTCGGGAAAGTTCGCGGAGTGCGACCAAGCTGCACCTTGAGGGGCTCGACA 956 Query 20937 TGGTTGTTGTAAACGTGGGCGTCACCCAAGGTGTGCACAAAGTCTCCCGGGGTCAGGCCC 20996 |||| ||| | ||| |||||||| | ||||| | || || || | ||| || Sbjct 957 TGGTCCAGGTAGATGTGCGCGTCACCAATCGTGTGGATGAACTCGCCAGCACGCAGCCCT 1016 Query 20997 GTGACGTGAGCGATCAGATACGTCAGGAGGGCGTAGCTGGCGATGTTAAACGGGACCCCG 21056 ||||| || |||| || ||||| || |||||||| |||||||| || || || ||| Sbjct 1017 GTGACCTGCGCGACGAGTCGCGTCAACAGCGCGTAGCTCGCGATGTTGAATGGCACGCCG 1076 Query 21057 AGGCCCATGTCGGCGGACCTCTGGTACAGCTGGCAGGACAGCTCCCCCCGAGCCACGTAA 21116 || ||||| || || || | ||||||| ||| ||||| ||||| || || |||||| Sbjct 1077 AGACCCATATCTGCTGAGCGTTGGTACATCTGACAGGAGAGCTCACCATTCGCAACGTAA 1136 Query 21117 AACTGACACAAAACGTGACAAGGAGGGAGAGCCATCCGCGCGAGGTCCGCGGGGTTCCAC 21176 ||||| || || | ||| || || || || |||||| | ||||||||| |||||||| Sbjct 1137 AACTGGCAGAACATGTGGCACGGCGGCAGCGCCATCTCCTTGAGGTCCGCAGGGTTCCAT 1196 Query 21177 GCGCACATAACGATGCGCCGATCGT--GGGGCCGCCTGTTAATTAGATCCACCACGTAAC 21234 || |||| | |||||||||||||| ||| || || | | || | | | ||| | | Sbjct 1197 GCCGACATGATGATGCGCCGATCGTTCGGGTTCGTCT-TGAGTTTG-TGGATCACCT-CC 1253 Query 21235 GC-AGCTGGTCCACCCCCTGACCCTCGTAGTTGGCGTCGGCCCCCCTGTACTCCGCCCCA 21293 || ||||| || || ||||| || ||||| ||||| | | |||||| || ||| Sbjct 1254 GCGAGCTGATCGACTCCCTGGCCAGAGTAGTCGGCGTGCATCGTCGTGTACTTGGCTCCA 1313 Query 21294 AAATGTCTCCACTGGAACCCGTACACCGGCCCCAGATCGCC 21334 || || | ||||||||| || ||||| || || |||||||| Sbjct 1314 AAGTGGCGCCACTGGAAGCCATACACTGGTCCGAGATCGCC 1354 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427729120028160