Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_004681.1 Length=75931 Score E Sequences producing significant alignments: (Bits) Value seq8357 172 3e-38 >seq8357 Length=31560 Score = 172 bits (190), Expect = 3e-38 Identities = 345/505 (68%), Gaps = 21/505 (4%) Strand=Plus/Minus Query 66838 CGCCTACATCGACGCTGAGCACTCCCTGGACCCCGAGTACGCCAAGGCGCTCGGTGTGGA 66897 ||| | ||||||||| |||||| || | ||| | | ||||||||| |||||| || | Sbjct 17777 CGCGTTCATCGACGCCGAGCACGCCATCGACGCGCACTACGCCAAGCAGCTCGGCGTCAA 17718 Query 66898 CCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGA 66957 | | ||| | ||| | ||||| ||| | || |||||||| || ||||||| || Sbjct 17717 CATTGACGAGCTCTACATCTCGCAGCCCGACTCGGGGGAGCAGGCGCTTGAGATCGCCGA 17658 Query 66958 CCTCCTCGTCAAGTCTGGCGAGCTGTCCA--TCGTCGTCGTTGACTCTGTGGCGGCCCTG 67015 | ||||| |||||||| | ||| | |||||||||| ||| ||||| || || Sbjct 17657 CACGCTCGTGCGGTCTGGCG--CCGTCGACGTCGTCGTCGTCGACAGCGTGGCCGCGCTC 17600 Query 67016 GTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGC 67075 ||||||||||| || ||||| ||||| || || ||| || ||| ||||| ||||| Sbjct 17599 GTGCCGCGCGCTGAACTCGAGGGCGAGATGGGCGACCAGCAGATCGCGCTGCAGGCGCGA 17540 Query 67076 CTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATCTC-CAGCA---CCAA---CAC 67128 |||||| ||||| ||||||||||||| || ||| | |||| |||| || Sbjct 17539 CTCATGAGCCAGGCGCTGCGCAAGCTCACGGG----ATCGCTGAGCAAGTCCAACTGCAT 17484 Query 67129 GCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAA 67188 ||| | ||| | |||||| | ||| |||| | |||| | | || || || Sbjct 17483 GCTCA---TCTTTCTGAACCAGATCCGCCAGAAAGTGGGCATCCT---CTTTGGGTCGCC 17430 Query 67189 TGAGACCACCACGGGCGGAAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCG 67248 ||| ||| ||||||| | ||| || | | |||||| || || || | || | || Sbjct 17429 CGAGGTCACGTCGGGCGGCACGGCGCTGCGCTACTACGCGTCGGTGCGGCTCGACATTCG 17370 Query 67249 TCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAAGT 67308 |||| ||| | ||||||||||| ||| ||||||||| | | || || || Sbjct 17369 GCGCAAGGCCGCGATCAAGGAAGGCGACAAGGTCGTCGGCAACGAGATCGTCGTCAAGGT 17310 Query 67309 CGTCAAGAACAAGCTGGCCCCGCCG 67333 || |||||||||||| || ||||| Sbjct 17309 CGCCAAGAACAAGCTCGCGTCGCCG 17285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242827785586304