Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_005832.1 Length=106332 Score E Sequences producing significant alignments: (Bits) Value seq5045 141 6e-29 seq2601 141 6e-29 >seq5045 Length=16147 Score = 141 bits (156), Expect = 6e-29 Identities = 375/569 (66%), Gaps = 23/569 (4%) Strand=Plus/Plus Query 25413 AGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGG 25472 ||||| ||| || || || || || |||||||||| ||| ||||| || | |||||| Sbjct 9306 AGCTGCACCTTGAGGGGCTCGACATGGTCCAGGTAGATGTGCGCGTCACCAATCGTGTGG 9365 Query 25473 ACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAG 25532 | ||||| || | ||||| || || | || | | ||| | || |||| Sbjct 9366 ATGAACTCGCCAGCACGCAGCCCTGTGACCTGCGCGACGAGTCGCGTCAACAGCGCGTAG 9425 Query 25533 CTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACA 25592 || |||||||| || || || |||| ||||| || | || | ||||| | |||||| Sbjct 9426 CTCGCGATGTTGAATGGCACGCCGAGACCCATATCTGCT-GAGCGTTGGTACATCTGACA 9484 Query 25593 CGAGAGCTCTTCGT-CGCTCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTA 25651 |||||||| | | ||| ||||||||||| || | ||| |||||| || || || | Sbjct 9485 GGAGAGCTCACCATTCGCA-ACGTAAAACTGGCAGAACATGTGGCACGGCGGCAGCGCCA 9543 Query 25652 TAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGT 25711 | | ||| ||||||||| || ||| |||||||| || || | ||||| Sbjct 9544 TCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGCCGATCGTTCGGGTTCG 9603 Query 25712 CCCTGA---------TAAGATCCGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGT 25762 | ||| | | |||||| |||||||| || ||| || |||| Sbjct 9604 TCTTGAGTTTGTGGATCACCTCCGCG---------AGCTGATCGACTCCCTGGCCAGAGT 9654 Query 25763 AGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCG 25822 |||| || ||| |||||||| ||||| || | | ||||||||| || ||||| | Sbjct 9655 AGTCGGCGTGCATCGTCGTGTACTTGGCTCCAAAGTGGCGCCACTGGAAGCCATACACTG 9714 Query 25823 GTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAAC 25882 |||| || || ||| |||| | || | | ||| | | || | | || | || | Sbjct 9715 GTCCGAGATCGCCAGCTTCGCGATGTCCGAGGCCGATGCTCTCTAGGTATTCCTTCGATC 9774 Query 25883 CATTGGCGTCCCAGATCTTTACCCCCTTCTCG-GAGAGCTCTTTGGAGTTTGTGGACCCT 25941 ||||| | ||||||||||| | ||||| || | | |||| | | || || || Sbjct 9775 CATTGCCATCCCAGATCTTGATACCCTTGTCCTGCAATGTCTTGGCA-TTGGTATCGCCA 9833 Query 25942 CTGACGAACCACAGCAGCTCCGCCGTGAC 25970 |||| |||||||||||||||| ||| ||| Sbjct 9834 CTGATGAACCACAGCAGCTCCTCCGCGAC 9862 >seq2601 Length=2056 Score = 141 bits (156), Expect = 6e-29 Identities = 375/569 (66%), Gaps = 23/569 (4%) Strand=Plus/Plus Query 25413 AGCTGAGTCTTCAGCGGTTCTACGTGATCCAGGTAGACGTGAGCGTCTCCCAGAGTGTGG 25472 ||||| ||| || || || || || |||||||||| ||| ||||| || | |||||| Sbjct 933 AGCTGCACCTTGAGGGGCTCGACATGGTCCAGGTAGATGTGCGCGTCACCAATCGTGTGG 992 Query 25473 ACAAACTCTCCCGGTTCTAGCCCGGTAACGTAAGCCATCATGTACGTGAGGAGAAAGTAG 25532 | ||||| || | ||||| || || | || | | ||| | || |||| Sbjct 993 ATGAACTCGCCAGCACGCAGCCCTGTGACCTGCGCGACGAGTCGCGTCAACAGCGCGTAG 1052 Query 25533 CTGGCGATGTTAAAGGGTACCCCGAACCCCATGTCCCCCCGACCTCTGGTAGAGCTGACA 25592 || |||||||| || || || |||| ||||| || | || | ||||| | |||||| Sbjct 1053 CTCGCGATGTTGAATGGCACGCCGAGACCCATATCTGCT-GAGCGTTGGTACATCTGACA 1111 Query 25593 CGAGAGCTCTTCGT-CGCTCACGTAAAACTGACACATGGTGTAGCACGGAGGAAGAGCTA 25651 |||||||| | | ||| ||||||||||| || | ||| |||||| || || || | Sbjct 1112 GGAGAGCTCACCATTCGCA-ACGTAAAACTGGCAGAACATGTGGCACGGCGGCAGCGCCA 1170 Query 25652 TAAGGCCCAAGTCTTTAGGGTTCCAGGCGCACACGATGATGCACCTGTCTTCTGGGTTGT 25711 | | ||| ||||||||| || ||| |||||||| || || | ||||| Sbjct 1171 TCTCCTTGAGGTCCGCAGGGTTCCATGCCGACATGATGATGCGCCGATCGTTCGGGTTCG 1230 Query 25712 CCCTGA---------TAAGATCCGCGGTGTTTTGCAGCTGATCCACCCCCATCCCCGAGT 25762 | ||| | | |||||| |||||||| || ||| || |||| Sbjct 1231 TCTTGAGTTTGTGGATCACCTCCGCG---------AGCTGATCGACTCCCTGGCCAGAGT 1281 Query 25763 AGTCTGCCCTCATGTCCGTGTACTCTGCTCCGAAATACCTCCACTGGAACCCGTACACCG 25822 |||| || ||| |||||||| ||||| || | | ||||||||| || ||||| | Sbjct 1282 AGTCGGCGTGCATCGTCGTGTACTTGGCTCCAAAGTGGCGCCACTGGAAGCCATACACTG 1341 Query 25823 GTCCTAGGTCTCCATCTTCCCTGTGCTCAAAGCCCCTCTTATCCAAAAAGTCTCTGGAAC 25882 |||| || || ||| |||| | || | | ||| | | || | | || | || | Sbjct 1342 GTCCGAGATCGCCAGCTTCGCGATGTCCGAGGCCGATGCTCTCTAGGTATTCCTTCGATC 1401 Query 25883 CATTGGCGTCCCAGATCTTTACCCCCTTCTCG-GAGAGCTCTTTGGAGTTTGTGGACCCT 25941 ||||| | ||||||||||| | ||||| || | | |||| | | || || || Sbjct 1402 CATTGCCATCCCAGATCTTGATACCCTTGTCCTGCAATGTCTTGGCA-TTGGTATCGCCA 1460 Query 25942 CTGACGAACCACAGCAGCTCCGCCGTGAC 25970 |||| |||||||||||||||| ||| ||| Sbjct 1461 CTGATGAACCACAGCAGCTCCTCCGCGAC 1489 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 340100324320416