Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq3132 316 2e-81 seq2702 140 3e-28 seq1220 129 6e-25 seq7397 102 8e-17 >seq3132 Length=41768 Score = 316 bits (350), Expect = 2e-81 Identities = 1149/1765 (65%), Gaps = 55/1765 (3%) Strand=Plus/Minus Query 144749 GTGCGCAAATAGTACATGCCCGTTTTGAGTCCCGAGCGCCAAGTGTAGTCGTGTATCGAC 144808 ||||||| |||||||||||||| ||||| ||| ||| | |||| ||| || ||| Sbjct 33443 GTGCGCAGGTAGTACATGCCCGTCTTGAGACCCTTCTTCCACGCGTAGAAGTGCATGGAC 33384 Query 144809 GTCATCAGAGCGTACGTGGGCTCCGCCACAAACAAATTTAGCGATTGGCTTTGATCAATG 144868 |||| | | ||| |||||||| | || || ||||| ||||| || ||| Sbjct 33383 GTCAGCTTGCTGATCGTCGGCTCCGCGATGTGCACGTTGAGCGACTGGCTCTGGCAGATG 33324 Query 144869 AAAGCGTTGCGGTCGGCGGCCATCTCAATCATA--CGTTTGCATTTCATTTCCCAAGCGG 144926 | ||| ||||||||||||||| || | || | | ||| || || ||||| ||| Sbjct 33323 TAGGCGCCGCGGTCGGCGGCCATGTCGAGCACGGCCTTCTGC--TTGATCTCCCACACGG 33266 Query 144927 TCTTGTACAAACGTTTAATGTGGTCCGGAATGCCGTCAATCGCCTGAATCGACCCCTTGT 144986 |||||||| || | | |||||| || || | ||| | ||| || | || Sbjct 33265 TCTTGTACTTCTCCTTCACGGCGTCCGGGATCACGCGCACGTTCTGCACCGAGCCGTGGT 33206 Query 144987 -GCGCAA-ATATGGCGTTCCGCATTTCGGACGTGTACAGTTTTAACTTGATCAAGTCGTC 145044 | | | || ||| || |||| |||| ||| | | | || ||| | || | Sbjct 33205 CGTGGAGGATCTGG--TTGCGCACCTCGGGCGTCCAGATGCCGAGCTCGATGAGCTCCTT 33148 Query 145045 AATTAAGTACTGATTGACGACCTGAAACTCGCCGGCCAACACACGACGCAAATACACGTT 145104 || | ||||| || |||| | |||||||| || | ||| || || |||| ||| Sbjct 33147 CATGAGGTACTTGTTCACGATCGTGAACTCGCCAGCGAGCACGCGGCGGTTGTACATGTT 33088 Query 145105 AGACGTGAAGGGTTCAAAAGACTCGTTATTGCCCAGGATTTGAGCGGTCGTTGCGGTGGG 145164 | |||||| || || | |||||||| ||||| ||||| || ||||||| || || || Sbjct 33087 GGTCGTGAACGGCTCGATCGACTCGTTGTTGCCGAGGATCTGCGCGGTCGACGCCGTCGG 33028 Query 145165 CATGTACGCCACCAATAATGAATTGCGCAGGCCGTGCTTCTTGATGTCTTCCTTTAGCGT 145224 ||| ||| | || | || ||||||| ||||| || | || | |||| |||| Sbjct 33027 CATCGGCGCGAGCAGCAGCGAGTTGCGCACGCCGTACTGCGCGACGCTCGCCTTGAGCGC 32968 Query 145225 ACCCCAATCCCATAG---CGAAGTCGGCCTCACGTCCCACATGTCGTACTGCAAAATGCC 145281 |||| ||||| || ||| |||||| | ||| ||||||||||| |||| || ||||| Sbjct 32967 GGCCCAGTCCCAGAGACCCGACGTCGGCGTGACGCCCCACATGTCGAACTGGAAGATGCC 32908 Query 145282 CTCGCTGGCGGGGCTGCCTTGAAAGGAACTGTAACTGCCCCAAGTTTTG-GCGAGCTCGC 145340 || ||| |||| || | || | || || | || | | |||||||| | Sbjct 32907 CTTGCTCACGGGCGAACCCTCGTAGCTGCCGT-ACGGGCCGTGCTCCCGTGCGAGCTC-C 32850 Query 145341 AAC-TCGCCTCCAGAGCGCCGAAATAAATTGTCTCGGCAATTTGCCTGTTGAGCAGCATC 145399 | | ||||||| |||||| || || | |||||| || | | |||||||| Sbjct 32849 ATCGAGGCCTCCATAGCGCCAAAGTACAGCGTCTCGAAGATGTTCTTGTTGAGCTCGCGG 32790 Query 145400 GCTTCATCGCTCTCGTACGGCATGCGCAGCAGTACAAAAGCATCGGCGAGCCCCTGTATT 145459 || || ||||||||| ||| || || || | || || || ||||| ||||| | Sbjct 32789 GCCTCGTCGCTCTCGAACGCGTAGCCCATGAGGATGAACGCGTCCGCGAGACCCTGCACG 32730 Query 145460 CCCACGCCGATGGGCCGATGTTTCATGTTGCTCATCCTCGCCGACTC---GATAGGATAT 145516 || | |||||| || || || || ||||| | | | | | ||| ||| || || Sbjct 32729 CCGATGCCGATCGGGCGGTGGCGCAGGTTGC---TGCGCTCGGCCTCGGGGATCGGGTAG 32673 Query 145517 CGATTACGGTCGATAATTTTATTCAAGTTTCGCACTACTACCTTTGTAATGTGCCGCAAC 145576 || |||||| | || |||| ||| ||| || ||||| || |||| | | Sbjct 32672 TAGTTGATGTCGATGACCTTGTTCAGGTTGCGCGTGACGACCTTGGTGATGTCGTAGAGC 32613 Query 145577 TTTTCAAAGTCAAACCGAGCCTCGTCAACGACCACACAGCTATTGAC--GGCGATCGACG 145634 || | |||||||| | || ||| || |||| | || | ||| ||||| |||| Sbjct 32612 TTCTTGAAGTCAAA---GGTCTTGTCGTCGGTCACA-AACT-TGGACAGCGCGATGGACG 32558 Query 145635 CCAAATTACAAACTGCCGTCTCCTC-GGCGTCGCTGTATTGTACGATCTCGGCGCACAAA 145693 | | || || || || ||| || |||| || |||| | | | |||| ||| | Sbjct 32557 CGAGGTTGCACACCGCGACCTCATCGGGCGACG-TGTACTCGAGCACCTCGCAGCAGAGG 32499 Query 145694 TTGCTACATTTGATGGTTCCCAGATTTTGCTGATTACTTTTCCTGTTGCACGCGTCCTTG 145753 ||||| | ||| || || || || ||||| || || | |||||||| ||||||| Sbjct 32498 TTGCTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCACGAGTCCTTG 32439 Query 145754 TAGAGCATGTACGGTCCGCCAGTCTCCACCTGCGTCTCCACGAT---AAAACGGTGCAAG 145810 || ||||||||||| ||| ||||| | ||||| ||| | ||| || | | || Sbjct 32438 TACAGCATGTACGGCGTGCCCGTCTCGATCTGCGACTCGAGGATCGCGAACCAGAGC--- 32382 Query 145811 TCCTGCGCACGCACCTGCTGCTGGTAGCGGCCCTCTTCTTCGTATTTCCTGTAGAGCTCC 145870 | |||||| || | | || | ||||||||| ||||| | ||| ||| || Sbjct 32381 TGCTGCGCGCGGATCGTCTTGCGCGCGCGGCCCTCGCGCTCGTACTGGTGGTACAGCGCC 32322 Query 145871 TCAAACGCGGAACCGTAGCAATCGGACAGGCCGGGACACTTGTTGGGACACATCAGCGAC 145930 || ||| || || | | | || || || || ||| || || | ||| | Sbjct 32321 TCGAACTCGTCGCCCCACGTCGTGTAGAGCCCCGGCGCCTCGTTCGGGCAGAACAGGCTC 32262 Query 145931 CATACGCCGTTGGCGTTGACGCGCTCCATAAACAAATCTGGCACCCACAGCGCGTACATC 145990 || |||||||||| | |||||||| ||| || | ||| || | ||||| |||||| | Sbjct 32261 CACTCGCCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGATCCACATCGCGTAGAAG 32202 Query 145991 AAGT--CGCGCGCTTTGCAATCCTCAGCACCCATGTTTC-GCTTCAAATTAAGCACACT- 146046 | | ||||||| |||| ||| | || || ||| ||| | | || | ||| Sbjct 32201 AGATCACGCGCGCGGTGCA--GCTC-GTTGCCGTGGTTCTTCTTGAGGTCCAGGA-ACTC 32146 Query 146047 ATAGATGTCCGCGTGCCACGGTTCAATATAGACGGCGAGGGCTCCTTTTCGTTT---GCC 146103 ||||||| ||||||||||| || | || | |||| | || || || || ||| Sbjct 32145 GAAGATGTCGGCGTGCCACGGCTCCAGGTACATCGCGAACGAGCCCTTGCGCTTGCCGCC 32086 Query 146104 ACCCTGGTCCACGTGACGTACCATGTTGTTAAAGACGCGCACCATGGGCTCGACGCCGCT 146163 |||||||| |||| || || ||| ||| |||||||||| ||||||| ||| |||| | Sbjct 32085 GCCCTGGTCGACGTAGCGCGCCGTGTCGTTGAAGACGCGCAGCATGGGCACGAGGCCGTT 32026 Query 146164 GGCTACGCCGTTCGT--AGAGTTTATTCTGGTGCCGCGGGAGCGCACGCAATGAACATTC 146221 | ||||||||| | | | | | || | | | ||| | | || || | Sbjct 32025 CGACGAGCCGTTCGTGCCGCGGATGTACGAGTTCGTC--GCGCGGATGTTGTGCACGCTG 31968 Query 146222 ACGCCGAGACCGCCGCCGTACTTGGATATAGCGGCGCAGTCGCCGAGCGTCTCGTAGATG 146281 ||||||| ||||| | ||||||| || ||||| | |||||| ||||||||| Sbjct 31967 ACGCCGATGCCGCCAGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTCGTAGATG 31908 Query 146282 CCGTCAATGCTATCG--CTTCGAATGCCGAGCAGAAAGCACGAGCACATCTGCGCCATCG 146339 || || || ||| |||| ||| ||||||| |||||||| ||| ||||| || Sbjct 31907 CCCTCGATCGAGTCGTCCTTC--ATGGCGAGCAGGAAGCACGACGACAGCTGCGGGCGCG 31850 Query 146340 GCGTCCCCGCCGAGAACAACGTCGGGCTCGCGTGCGTAAACATTTTTCGGCTCATCATCC 146399 |||| ||||| ||||| |||||| |||||||||| || | || | ||| | Sbjct 31849 GCGTGCCCGCGTTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACATGTACT 31790 Query 146400 GATACGTTTCGATAGCGTCTTGAATGTCGTCGCCATGAATGCCCAAAGCGACGCGCATGA 146459 ||||| |||| || | | |||||||| || ||||| | ||||| |||| | Sbjct 31789 CGTACGTCTCGAGCGCAGCGTCAATGTCGTGCTTGTGGATGCCGACGGCGACACGCAGAA 31730 Query 146460 GCATGTGTTGGGGCCGCTCCGCCAC 146484 ||| || || || |||||||| || Sbjct 31729 TCATCTGCTGCGGACGCTCCGCGAC 31705 >seq2702 Length=56295 Score = 140 bits (154), Expect = 3e-28 Identities = 167/227 (74%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||||||||||| || |||||||| || Sbjct 26991 CCACCACGCAGGCGGAGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAG 26932 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | ||||| |||||| ||||||||||| ||| |||| | |||||||| ||||||||| Sbjct 26931 AGCGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGG 26872 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGATG 131187 ||||| || ||||| ||| |||||||||| | || | | || | | ||||| | Sbjct 26871 ATTCCCTCCTTGTCCTGGATCTTCTGCTTGACATTGTCAATGCTGTCCGAAGGCTCGACG 26812 Query 131188 TCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 |||| || | || || ||||| ||||| || ||||| |||||||| Sbjct 26811 TCGAGCGTGATCGTCTTGCCGGTCAGAGTCTTGACGAAGATCTGCAT 26765 >seq1220 Length=9499 Score = 129 bits (142), Expect = 6e-25 Identities = 166/229 (72%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 131007 GCCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCT 131066 |||||| |||| ||||||||| | || | ||||||||||| || |||||||| || Sbjct 261 GCCACCACGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGA 202 Query 131067 CATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGG 131126 || ||||| |||||| ||||||||||| ||| |||| | |||||||||||||| || Sbjct 201 CAGCGTGCGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGCGG 142 Query 131127 GATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 || || || ||||| || |||||||||| | || | | || | | ||| | Sbjct 141 AATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATCGAGTCCGACGGCTCCAC 82 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCATG 131235 ||||| || | || || || || || || || ||||| ||||||||| Sbjct 81 GTCGAGCGTGATCGTCTTGCCCGTCAGCGTCTTCACGAAGATCTGCATG 33 >seq7397 Length=9624 Score = 102 bits (112), Expect = 8e-17 Identities = 98/126 (78%), Gaps = 0/126 (0%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 ||||| |||| || ||||| | || | ||||||||||| || |||||||| || Sbjct 4193 CCACCACGCAGGCGGAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAA 4252 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | |||||| |||||| ||||||||||| ||| |||| | |||||||| ||||||||| Sbjct 4253 AGGGTGCGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGG 4312 Query 131128 ATTCCT 131133 |||||| Sbjct 4313 ATTCCT 4318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 471959745761280