Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_008586.1 Length=131204 Score E Sequences producing significant alignments: (Bits) Value seq2702 118 9e-22 seq3132 111 1e-19 seq1220 89.7 4e-13 >seq2702 Length=56295 Score = 118 bits (130), Expect = 9e-22 Identities = 148/203 (73%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 22213 GTAAAGATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAA 22272 ||||||||||| || || || || ||| | ||||| || ||| |||| || || || || Sbjct 26759 GTAAAGATGCAGATCTTCGTCAAGACTCTGACCGGCAAGACGATCACGCTCGACGTCGAG 26818 Query 22273 ACCACCGATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCC 22332 | | || | | | ||| || |||| || || || || ||||||||||| || || || Sbjct 26819 CCTTCGGACAGCATTGACAATGTCAAGCAGAAGATCCAGGACAAGGAGGGAATCCCTCCG 26878 Query 22333 GATCAACAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGAT 22392 ||||| || || || || || |||||||| ||| | ||||| |||||| |||| || Sbjct 26879 GATCAGCAGCGCCTGATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGCACGCTCTCGGAC 26938 Query 22393 TACAACATTCAAAAAGAATCCAC 22415 |||||||| || || || || || Sbjct 26939 TACAACATCCAGAAGGAGTCGAC 26961 >seq3132 Length=41768 Score = 111 bits (122), Expect = 1e-19 Identities = 290/437 (66%), Gaps = 9/437 (2%) Strand=Plus/Minus Query 129961 GTGTCGAGCAACGGCGATTCACGCGGACACATCAAACTCCACATTCCATCCGCTTCGACT 130020 |||| |||| ||||| || ||| || | || |||||| || | || ||||| Sbjct 32300 GTGTAGAGCCCCGGCGCCTCGTTCGGGCAGAACAGGCTCCACTCGCCGTTGGCCTCGACG 32241 Query 130021 CGTTTCATAAACAAATCGGGTACCCACAGGGCGTACAACAAATCTCGCGCTTTTCTATCC 130080 || ||||| || | |||||| | ||||| ||||| || | ||| ||||| | Sbjct 32240 CGCTTCATGAAGAGATCGGGGATCCACATCGCGTAGAAGAGATCACGCGCGCGGTGCAGC 32181 Query 130081 TCGGCACCCATGTTACGTTTCAGTTCAAGGAAATCGTAAATGTCGGCGTGCCACGGTTCA 130140 ||| || ||| || || || ||||| ||| | ||||||||||||||||| || Sbjct 32180 TCGTTGCCGTGGTTCTTCTTGAGGTCCAGGAACTCGAAGATGTCGGCGTGCCACGGCTCC 32121 Query 130141 ACATAAATTGCCATTGCGCCCTTCCGTTT---GCCCCCTTGGTCAACGTGGCGCACGGCA 130197 | || || || | | |||||| || || ||| || ||||| |||| |||| | | Sbjct 32120 AGGTACATCGCGAACGAGCCCTTGCGCTTGCCGCCGCCCTGGTCGACGTAGCGCGCCGTG 32061 Query 130198 TTGTTGTAGACTCGCAACATTGCCTCCAATCCGTTGGCCGTGCCGTTTGTGCTCTCAATG 130257 | |||| |||| |||| ||| | | | | ||||| | || |||||| |||| ||| Sbjct 32060 TCGTTGAAGACGCGCAGCATGGGCACGAGGCCGTTCGACGAGCCGTTCGTGCCGCGGATG 32001 Query 130258 AA--ACTGCCACGAGCCCGAACGTTATGAACGCTTAGACCTATGCCGCCGCCAAATTTTG 130315 | | | | | || || | ||| || ||||| | || |||||||| | | || | Sbjct 32000 TACGAGTTCGTC--GCGCGGATGTTGTGCACGCTGACGCCGATGCCGCCAGCCCACTTGG 31943 Query 130316 ATATCAACGCGCAATCGCGT-AGCGTTTCATAAATGCCAACGATACTGTCTTCTTTAATG 130374 | || ||||||| | || | ||||| || || ||||| |||| ||| || || ||| Sbjct 31942 AGATGCACGCGCACT-GCTTGAGCGTGTCGTAGATGCCCTCGATCGAGTCGTCCTTCATG 31884 Query 130375 TTTAGGAGGAAACACGA 130391 || ||||| ||||| Sbjct 31883 GCGAGCAGGAAGCACGA 31867 >seq1220 Length=9499 Score = 89.7 bits (98), Expect = 4e-13 Identities = 138/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 22219 ATGCAAATTTTTGTTAAAACTTTAACCGGTAAAACGGTCACTCTTGAAGTGGAAACCACC 22278 ||||| || || || || || | || || || ||| |||| || || ||||| | | Sbjct 34 ATGCAGATCTTCGTGAAGACGCTGACGGGCAAGACGATCACGCTCGACGTGGAGCCGTCG 93 Query 22279 GATACCGTGGACGATATCAAACAAAAAATTCAAGACAAGGAGGGTATTCCACCCGATCAA 22338 || | | ||| | |||| || || ||||| ||||||||||| ||||| || || || Sbjct 94 GACTCGATCGACAACGTCAAGCAGAAGATTCAGGACAAGGAGGGCATTCCGCCGGACCAG 153 Query 22339 CAACGTCTTATATTTGCCGGCAAACAGTTAGAGGATCACCGCACCGTCTCCGATTACAAC 22398 || || || || || || ||||| ||| | ||||| |||||| | || || |||||| Sbjct 154 CAGCGCCTGATCTTCGCTGGCAAGCAGCTGGAGGACGGCCGCACGCTGTCGGACTACAAC 213 Query 22399 ATTCAAAAAGAATCCAC 22415 || || || || || || Sbjct 214 ATCCAGAAGGAGTCGAC 230 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419682002008480