Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq3132 242 4e-59 seq4347 203 4e-47 seq7148 93.3 5e-14 >seq3132 Length=41768 Score = 242 bits (268), Expect = 4e-59 Identities = 1118/1749 (64%), Gaps = 71/1749 (4%) Strand=Plus/Minus Query 113597 CGGAGGTAGTACATCCCCGTCTTGAGCCCCTGCTTCCAGGCATACATATGCATCGAGGAC 113656 || ||||||||||| ||||||||||| |||| |||||| || || | ||||| || | | Sbjct 33440 CGCAGGTAGTACATGCCCGTCTTGAGACCCTTCTTCCACGCGTAGAAGTGCATGGACGTC 33381 Query 113657 AACTTGGAGAGTGTTGGACTTTCCATGAAGAGGTTCATACTTTGGGATTGATCGATGAAG 113716 | |||| || || || | ||| | ||| | ||| || |||| || Sbjct 33380 AGCTTGCTGATCGTCGGCTCCGCGATGTGCACGTTGAGCGACTGGCTCTGGCAGATGTAG 33321 Query 113717 CGTCCACGATCCGCCGCCATATCAATCACATCCTTCATCTTGATTTCCCACACAGTTCTG 113776 || || || || ||||| || | ||| ||||| |||||| |||||||| || || Sbjct 33320 GCGCCGCGGTCGGCGGCCATGTCGAGCACGGCCTTCTGCTTGATCTCCCACACGGTCTTG 33261 Query 113777 TAGAGGTTCTTAATATCATCTGGGATATC---CACGATATTTTGGATGGAGCCACCCGCC 113833 || | ||| | | || ||||| | |||| || || | ||||| | Sbjct 33260 TACTTCTCCTTCACGGCGTCCGGGATCACGCGCACG---TTCTGCACCGAGCCGTGGTCG 33204 Query 113834 TTGACCATGAGATCCTTCATATCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACG 113893 | || || | | || || | ||||| || | || |||| |||| || | Sbjct 33203 TGGAGGATCTGGTTGCGCACCTCGGGCGTCCAGATGCCGAGCTCGATGAGCTCCTTCATG 33144 Query 113894 AGATGCTTATTGACAACAACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTC 113953 || | ||| || || | ||||| || ||||| ||| | || || |||||| Sbjct 33143 AGGTACTTGTTCACGATCGTGAACTCGCCAGCGAGCACGCGGCGGTTGTACATGTTGGTC 33084 Query 113954 GTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATG 114013 ||| | ||||| | |||| ||||| || | ||| || ||||| || || || ||||| Sbjct 33083 GTGAACGGCTCGATCGACTCGTTGTTGCCGAGGATCTGCGCGGTCGACGCCGTCGGCATC 33024 Query 114014 GGTGCCATGAGAAGGCTGTTACGGAGACCCTTTTCCCTAATGCGTTCCTTGAGGGCGTCC 114073 || || | || || ||| || | || | | | | || ||||||| ||| || Sbjct 33023 GGCGCGAGCAGCAGCGAGTTGCGCACGCCGTACTGCGCGACGCTCGCCTTGAGCGCGGCC 32964 Query 114074 CAGTCGTAGTTGAGCTTTGTC-TCCCCCTG-----CCACATATCAAACTGGAGGATACCT 114127 ||||| || || | | | || | || |||||| || ||||||| ||| || Sbjct 32963 CAGTCCCAGA-GACCC--GACGTCGGCGTGACGCCCCACATGTCGAACTGGAAGATGCCC 32907 Query 114128 TGGGAGGCTGGCGATCCCTCAAATGTCTCGTATGGGCCCTCAACCTCCGCCAATTCGGAG 114187 | | | ||||| ||||| | | |||| ||||| | || || ||| Sbjct 32906 TTGCTCACGGGCGAACCCTCGTAGCTGCCGTACGGGCCGTGCTCCCGTGC-------GAG 32854 Query 114188 CTCGCCTCGAGGGCT-----GCGTGA---TACATTGTCTCAAAAATGCGAGCATTCATTG 114239 ||| | |||||| || ||| | |||| ||||| || ||| || | Sbjct 32853 CTC-CATCGAGGCCTCCATAGCGCCAAAGTACAGCGTCTCGAAGATGTTCTTGTTGAGCT 32795 Query 114240 CCTTGGCCTCGTCGGAATCAAACGCG-AGTCGGCACAAA-ATAAATACATCCGCGAGACC 114297 | |||||||||| || |||||| || | || | || || | ||||||||||| Sbjct 32794 CGCGGGCCTCGTCGCTCTCGAACGCGTAGCC--CATGAGGATGAACGCGTCCGCGAGACC 32737 Query 114298 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACG-- 114355 || || |||| ||| || ||||| || | || || | || ||| ||| | Sbjct 32736 CTGCACGCCGATGCCGATCGGGCGGTGGCGCAGGTTGC---TGCGCTCGGCCTCGGGGAT 32680 Query 114356 -GGATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTC 114414 || || | || | ||||| ||| | || || || ||||| ||||| ||||| || Sbjct 32679 CGGGTAGTAGTTGATGTCGATGACCTTGTTCAGGTTGCGCGTGACGACCTTGGTGATGTC 32620 Query 114415 ATGAAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGGGCGAT 114474 | ||||| | | | ||||| | | || || | ||| |||| | || ||||| Sbjct 32619 GTAGAGCTTCTTGAAGTCAAAGGTCT---TGTCGTCGGTCACAAACTTGGACAGCGCGAT 32563 Query 114475 TGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTACA 114534 ||||| || || ||||| | | |||||| |||||||| | | || || Sbjct 32562 GGACGCGAGGTTGCACACCGCGACCTCATCGGGCGACGTGTACTCGAGCACCTCGCAGCA 32503 Query 114535 CAAATTTGAACTCTTA---ATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGC 114591 | || ||| || ||||| | ||||| || || ||||| ||| |||| Sbjct 32502 GAGGTTG---CTCGAGCGGATCGTGCCGAGGTTCTGCTGGTTCGACTTGCGGTTGCACGA 32446 Query 114592 ATCCTTGTAAAGCATGTATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCA 114651 |||||||| |||||||| ||||| |||||||| | || |||| ||| || || ||| Sbjct 32445 GTCCTTGTACAGCATGTACGGCGTGCCCGTCTCGATCTGCGACTCGAGGATCGCGAACCA 32386 Query 114652 GACATCGGCGGCTG-GCACAG-TGGCGTTG---GCTCGCCCCTCCTCCTCGTACTTTGTG 114706 || || |||| || | | | | ||| || || ||||| |||||||| | Sbjct 32385 GA-----GCTGCTGCGCGCGGATCGTCTTGCGCGCGCGGCCCTCGCGCTCGTACTGGTGG 32331 Query 114707 TAGAGGGCTTCAAACTCTTCACCC-ACGGCCTCTGAGAGCCCTGGTGCCTTATCTGGGCA 114765 || || || || ||||| || ||| ||| | | | ||||||| || |||| | ||||| Sbjct 32330 TACAGCGCCTCGAACTCGTCGCCCCACGTCGTGT-AGAGCCCCGGCGCCTCGTTCGGGCA 32272 Query 114766 GAAGAGAGACCATTGACCACCCTCCTCAACACGCTTCATGAAGAGGTCTGGGATCCAGAG 114825 ||| || ||| | || |||| || |||||||||||||| || |||||||| | Sbjct 32271 GAACAGGCTCCACTCGCCGTTGGCCTCGACGCGCTTCATGAAGAGATCGGGGATCCACAT 32212 Query 114826 AGCTGAGAAGAGATCCCGACAGCGA-GCTTCTTCATCCCCCTGATTGAGACGCAACTCCA 114884 || |||||||||| || ||| || || | | || || || | |||| Sbjct 32211 CGCGTAGAAGAGATCACGCGCGCGGTGCAGCT-CGTTGCCGTGGTTCTTCTTGAGGTCCA 32153 Query 114885 AAAAGTCCATGATATCCGCGTGCCACGGTTCCAGGTACACCGCGATTGACCCCTTACGA- 114943 || || | ||| || ||||||||||| |||||||||| ||||| || ||||| || Sbjct 32152 GGAACTCGAAGATGTCGGCGTGCCACGGCTCCAGGTACATCGCGAACGAGCCCTTGCGCT 32093 Query 114944 --CGACCAGCCTGGTTTACATACCTCGCTGTGGCATTAAATACGCGAAGCATTGGAATGA 115001 | || |||||| || || | ||| ||| | || || ||||| ||||| || | || Sbjct 32092 TGCCGCCGCCCTGGTCGACGTAGCGCGCCGTGTCGTTGAAGACGCGCAGCATGGGCACGA 32033 Query 115002 TACCATCAGATTGGCCATTTGTCCCCCGAAT--ACGAGACTTATTGGCTCTGACATCATG 115059 || | || ||| || || || || || ||||| || | || | || | || Sbjct 32032 GGCCGTTCGACGAGCCGTTCGTGCCGCGGATGTACGAG--TTCGTCGCGCGGATGTTGTG 31975 Query 115060 GATGTGCATACCAATACCCCCTGCCCACTTTGAGATTTGCGCGCACTCCGTGAGACTGCC 115119 | | | || || || || |||||||| ||||| |||||||| | |||| || | Sbjct 31974 CACGCTGACGCCGATGCCGCCAGCCCACTTGGAGATGCACGCGCACTGCTTGAGCGTGTC 31915 Query 115120 GTAGATCCCGTCGATCGAGTCACCCTTATTTGCGATAAGGAAGCAGCTCGACATTTGTGG 115179 |||||| || ||||||||||| |||| | |||| |||||||| ||||| || || Sbjct 31914 GTAGATGCCCTCGATCGAGTCGTCCTTCATGGCGAGCAGGAAGCACGACGACAGCTGCGG 31855 Query 115180 CCTTGGTGTACCAGCGTTGAAGAGGGTTGGTGTCGCGTGGATGAACATACCTTGGGACAT 115239 | || || || |||||||| || || || |||||||| |||| | | ||| ||||| Sbjct 31854 GCGCGGCGTGCCCGCGTTGAACAGCGTCGGCGTCGCGTGCGTGAAGAAGCTTTGCGACAT 31795 Query 115240 CTTATCGTAGGTCTCCAAGACGGCGGGAATGTCTTCCCCGTGAATACCGATCGAGACCCG 115299 | ||||| ||||| | | ||| |||||| | | ||| || |||| | ||| || Sbjct 31794 GTACTCGTACGTCTCGAGCGCAGCGTCAATGTCGTGCTTGTGGATGCCGACGGCGACACG 31735 Query 115300 CATAAACAT 115308 || || ||| Sbjct 31734 CAGAATCAT 31726 >seq4347 Length=93765 Score = 203 bits (224), Expect = 4e-47 Identities = 399/580 (69%), Gaps = 14/580 (2%) Strand=Plus/Plus Query 125758 GTAGTCCCCAACCCGCTTCTCGAAGAAGTTTGTCTTCCCGTCCAAGCTGATATTCTCCAT 125817 ||| || ||||| ||||||||||||||||| ||||| || | | ||| | ||||| Sbjct 72435 GTACTCGCCAACGCGCTTCTCGAAGAAGTTGGTCTTGCCCTGGAGCGAGATCATGTCCAT 72494 Query 125818 AAAATCAAATGGGTTCTTTGAGTTCCAAATTGTTGGC-ACCCCAATCTGTTTGAGGAGAC 125876 | ||||| |||||| || |||| ||||| || |||| | | |||||| | Sbjct 72495 CCAGTCAAACGGGTTCGACACCTTGTAAATC-TTGGCGACACCAAGCGCGTGGAGGAGGC 72553 Query 125877 GATCCGAGACGTACTCAATGTACTCAGACATCTTCTCAGAGTTCATACCGATGAGGTTAC 125936 |||| | | | |||| ||||||| |||| | |||||||| ||||| || | Sbjct 72554 GATCGGCGCAGAACTCGATGTACTGGCACATGAGCGACGAGTTCATGCCGATCAGCTCGA 72613 Query 125937 ATGGGAGCGCGTCCAAGATGAACCCCTTCTCAATTTCCACGGCTTCCCGCACGATGGCGT 125996 || |||| |||| || |||| |||||||||| | ||||| || || | ||| | | Sbjct 72614 CCGGAAGCGAGTCCTGGACGAACTCCTTCTCAATCGCGACGGCATCGCGAATGATCTCAT 72673 Query 125997 GAATGGTGTCCACCCCAGGTCTATTGCGCAAAGTCTTGAAGAGTTCCAC-GGCAAAC--- 126052 | ||| | || || || | | ||| |||| |||| | | ||||| | Sbjct 72674 GGATGCG--CGACTCCGGGAGCTTGTTGACAAG-CTTG--GAGTACAGCAGGCAAGCGAA 72728 Query 126053 -TCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCCTGGCAT 126111 || |||||| ||||| || || |||||||| || |||||||||| || || ||||| Sbjct 72729 GTCGCAGTGGAGGCCCTCATCGCGCGAGATGAGCTCGTTCGAGAAGCTGAGGCCAGGCAT 72788 Query 126112 GAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGATTCCCTC 126171 |||||| |||||||| | |||||| || | || || || ||||||||||| || ||||| Sbjct 72789 GAGACCACGCTTCTTGAGCCAGAAGATGGAGCAGAACGAGCCCGAGAAGAAAATGCCCTC 72848 Query 126172 CACACACGCGAACGCAAAGAGACGCTCAGC-AAAGGAGCGCGACTTTGTGTCAAACCACT 126230 || |||||||| | | |||||||| |||| ||||| | | ||| |||||| Sbjct 72849 AACGGCAGCGAACGCGACAATGCGCTCAGCAAAAGCCGCGCGGC-GCGAGTCGCACCACT 72907 Query 126231 TCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAAAGAGTT 126290 | | |||||| |||||||| |||| | || || | ||||| ||| || | ||| | Sbjct 72908 TGAGCGCCCAGTGCGCCTTCTTCTGCACGCATGGAATGGTCTCGATGGCGCGGAGGAGGT 72967 Query 126291 CCTTCTTTTCTGATGGATCTTTGATGTACTTATCTATGAG 126330 ||||| || | | || ||||||||| | || ||||| Sbjct 72968 GGTTCTTCTCCGTCTGGTCCTTGATGTACGTGTCAATGAG 73007 >seq7148 Length=46129 Score = 93.3 bits (102), Expect = 5e-14 Identities = 119/164 (73%), Gaps = 0/164 (0%) Strand=Plus/Minus Query 172808 AGAGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACTGCGAGGGTC 172867 || || ||||||||||| | ||||| ||||| || || || ||| | ||||| |||| Sbjct 11155 AGTGGAAACACACCGTAATAGTCACGTCCAACAACGGAGAGTCCACTGATTGCGAAGGTC 11096 Query 172868 TTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTTTCCAGATTGTGCCGTCCCCGCC 172927 || || || || ||||| |||| |||||||| || ||| | | || || || || Sbjct 11095 TTGGCTGATTCGCCCTCAGTCAAAATGAGCGTGCAGTTTTGACCCTTCGCTGTACCAGCG 11036 Query 172928 TTGTTCGCATCGTCCAACTTGGGAATACCAGTAATTTTGGACTT 172971 | |||||||||||| | ||| ||||| || || | || ||||| Sbjct 11035 TAGTTCGCATCGTCGAGCTTCGGAATTCCGGTGAGCTTCGACTT 10992 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597286457455360