Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_011055.1 Length=76312 Score E Sequences producing significant alignments: (Bits) Value seq8357 187 1e-42 >seq8357 Length=31560 Score = 187 bits (206), Expect = 1e-42 Identities = 348/505 (69%), Gaps = 21/505 (4%) Strand=Plus/Minus Query 65232 CGCCTACATCGACGCTGAGCACTCCCTGGACCCTGAGTACGCCAAGGCGCTCGGTGTGGA 65291 ||| | ||||||||| |||||| || | ||| | | ||||||||| |||||| || | Sbjct 17777 CGCGTTCATCGACGCCGAGCACGCCATCGACGCGCACTACGCCAAGCAGCTCGGCGTCAA 17718 Query 65292 CCTCGACAACCTCGTGGTGGTTCAGCCGGACACTGGCGAGCAGGCCCTGGAGATCGTTGA 65351 | | ||| | ||| | ||||| ||| | || |||||||| || ||||||| || Sbjct 17717 CATTGACGAGCTCTACATCTCGCAGCCCGACTCGGGGGAGCAGGCGCTTGAGATCGCCGA 17658 Query 65352 CCTCCTCGTCAAGTCTGGCGAGCTGTCCA--TCGTCGTCGTTGACTCTGTGGCGGCCCTG 65409 | ||||| |||||||| | ||| | |||||||||| ||| ||||| || || Sbjct 17657 CACGCTCGTGCGGTCTGGCG--CCGTCGACGTCGTCGTCGTCGACAGCGTGGCCGCGCTC 17600 Query 65410 GTGCCGCGCGCCGAGCTCGAAGGCGACATCGGGGACAGTCACGTCGGCCTGCACGCGCGC 65469 ||||||||||| || ||||| ||||| || || ||| || ||| ||||| ||||| Sbjct 17599 GTGCCGCGCGCTGAACTCGAGGGCGAGATGGGCGACCAGCAGATCGCGCTGCAGGCGCGA 17540 Query 65470 CTCATGTCGCAGGCCATGCGCAAGCTCACTGGCACCATCTC-CAGCA---CCAA---CAC 65522 |||||| ||||| ||||||||||||| || ||| | |||| |||| || Sbjct 17539 CTCATGAGCCAGGCGCTGCGCAAGCTCACGGG----ATCGCTGAGCAAGTCCAACTGCAT 17484 Query 65523 GCTGACGCTCTGGGTCAACCAGTTGCGCGAGAAGATCGGCAACGTGGGCTACGGCCCGAA 65582 ||| | ||| | |||||| | ||| |||| | |||| | | || || || Sbjct 17483 GCTCA---TCTTTCTGAACCAGATCCGCCAGAAAGTGGGCATCCT---CTTTGGGTCGCC 17430 Query 65583 CGAGACCACCACGGGCGGCAAGGCTTTGAGGTTCTACGCCTCAGTCCGCATGGATGTCCG 65642 |||| ||| ||||||||| ||| || | | |||||| || || || | || | || Sbjct 17429 CGAGGTCACGTCGGGCGGCACGGCGCTGCGCTACTACGCGTCGGTGCGGCTCGACATTCG 17370 Query 65643 TCGCATCGCCACCGAGAAGGAAGGCGATGAGGCTGTCGGCAACCGCACCCGGGTGAAGGT 65702 |||| ||| | ||||||||||| ||| ||||||||| | | || ||||| Sbjct 17369 GCGCAAGGCCGCGATCAAGGAAGGCGACAAGGTCGTCGGCAACGAGATCGTCGTCAAGGT 17310 Query 65703 CGTCAAGAACAAGCTGGCCCCGCCG 65727 || |||||||||||| || ||||| Sbjct 17309 CGCCAAGAACAAGCTCGCGTCGCCG 17285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 244046851974176