Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_011056.1 Length=75811 Score E Sequences producing significant alignments: (Bits) Value seq8357 143 1e-29 >seq8357 Length=31560 Score = 143 bits (158), Expect = 1e-29 Identities = 397/599 (66%), Gaps = 25/599 (4%) Strand=Plus/Minus Query 65973 CGGGTAGTGGAGATCTACGGTCCTGAGTCTTCAGGGAAGTCAACGTT-GTGC----CTCC 66027 || || |||||||| |||||||| ||| || || ||| | ||| | | || || | Sbjct 17869 CGCGTTGTGGAGATTTACGGTCCCGAGAGCTCTGGCAAGACGACGCTCGCGCTCAGCTGC 17810 Query 66028 A-CGCGGTGGC-CAATGCCCAG-AAGGCCGGTGGCAACGCCGCCTACATCGACGCCGAAC 66084 | |||| ||| ||| ||| ||||| ||| | ||| | |||||||||||| | Sbjct 17809 ATCGCGCAGGCGCAA----CAGCAAGGC----GGCGTCTGCGCGTTCATCGACGCCGAGC 17758 Query 66085 ATTCTCTCGACCCTGAGTACGCCGCGGCGCTCGGGGTGGATGTCGACAATCTCGTGGTTG 66144 | | ||||| | | |||||| | |||||| || | | ||| | ||| | Sbjct 17757 ACGCCATCGACGCGCACTACGCCAAGCAGCTCGGCGTCAACATTGACGAGCTCTACATCT 17698 Query 66145 TGCAGCCAGACACTGGCGAGCAGGCCCTGGAGATCGTTGACCTTCTCGTCAAGTCTGGCG 66204 |||||| ||| | || |||||||| || ||||||| ||| ||||| |||||||| Sbjct 17697 CGCAGCCCGACTCGGGGGAGCAGGCGCTTGAGATCGCCGACACGCTCGTGCGGTCTGGCG 17638 Query 66205 AGGTTTCCATCATCGTTGTGGACTCTGTGGCGGCCCTGGTGCCGCGGGCGGAGCTCGAAG 66264 || | || |||| || ||| ||||| || || |||||||| || || ||||| | Sbjct 17637 CCGTCGACGTCGTCGTCGTCGACAGCGTGGCCGCGCTCGTGCCGCGCGCTGAACTCGAGG 17578 Query 66265 GGGACATCGGGGACTCGCACGTCGGCCTGCATGCCCGCCTGATGTCTCAGGCCATGCGCA 66324 | || || || ||| ||| ||| ||||| || || || ||| ||||| |||||| Sbjct 17577 GCGAGATGGGCGACCAGCAGATCGCGCTGCAGGCGCGACTCATGAGCCAGGCGCTGCGCA 17518 Query 66325 AGCTGACCGGCACGAT-TGCCAG--CACCAACACGCTCACCCTGTGGGTGAATCAGCTGC 66381 |||| || || || | || || || | || ||||| | | |||| ||| | | Sbjct 17517 AGCTCACGGGATCGCTGAGCAAGTCCAACTGCATGCTCA---TCTTTCTGAACCAGATCC 17461 Query 66382 GCGAGAAGATCGGCAACGTGGGCTACGGCCCGAATGAGACCACCACCGGTGGTAAGGCTC 66441 || |||| | |||| | | || || || ||| ||| | || || | ||| | Sbjct 17460 GCCAGAAAGTGGGCATCCT---CTTTGGGTCGCCCGAGGTCACGTCGGGCGGCACGGCGC 17404 Query 66442 TGCGCTTCTACGCCTCGGTGCGTATGGATGTCCGCAGGATCGCCACCGAGAAGGAAGGCG 66501 |||||| |||||| |||||||| | || | || | | ||| | |||||||||| Sbjct 17403 TGCGCTACTACGCGTCGGTGCGGCTCGACATTCGGCGCAAGGCCGCGATCAAGGAAGGCG 17344 Query 66502 ATGAGGCTGTCGGCAACCGCACGCGCGTGAAGGTTGTCAAGAACAAGCTGGCGCCTCCG 66560 | ||| ||||||||| | ||| ||||| | |||||||||||| ||| | ||| Sbjct 17343 ACAAGGTCGTCGGCAACGAGATCGTCGTCAAGGTCGCCAAGAACAAGCTCGCGTCGCCG 17285 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 242443827668864