Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq3132 526 2e-144 >seq3132 Length=41768 Score = 526 bits (582), Expect = 2e-144 Identities = 1256/1879 (67%), Gaps = 60/1879 (3%) Strand=Plus/Plus Query 93718 TACGATTACTTTGCCTTCAAAACTCTGGAGAAGTCGTACCTCCTCAAGATGGATGGCAGG 93777 ||||| ||||||| |||||| || || ||||||||||| |||||| | | |||| | Sbjct 31645 TACGACTACTTTGGCTTCAAGACGCTCGAGAAGTCGTATCTCCTCCGCGTCGGCGGCAAG 31704 Query 93778 GTTTCCGAGCGACCGCACCAGCTGCTGATGCGCGTCGCCATCGGGATTCACGGCCACGAC 93837 || | ||||| ||||| ||| || | |||| |||||| |||| || ||| |||||| Sbjct 31705 GTCGCGGAGCGTCCGCAGCAGATGATTCTGCGTGTCGCCGTCGGCATCCACAAGCACGAC 31764 Query 93838 AT-GCCGAATGTTTTGCGGGCTTTCAGAG-ACATGCGGGACAAGAGGTATACCATG---G 93892 || | || || | | | | | ||| ||||| | ||| || | || | | Sbjct 31765 ATTGACGC-TGCGCTCGAGACGTAC-GAGTACATGTCG--CAA-AGCTTCTTCACGCACG 31819 Query 93893 CCACCCCGACCCTGTTCAACGCGGGGACCCCGGTGCCACAGATGTCTTCGTGTTTCCTGA 93952 | || ||||| |||||||||||||| || ||| || ||| |||| ||||| |||||| Sbjct 31820 CGACGCCGACGCTGTTCAACGCGGGCACGCCGCGCCCGCAGCTGTCGTCGTGCTTCCTGC 31879 Query 93953 TGACGAACAAGGCCGACTCCATCTCCGGAATTTTCGACAGCCTCAAGGACTGTGCGACCA 94012 | | | |||| |||||| ||| || || | ||||| |||||| | || ||| || Sbjct 31880 TCGCCATGAAGGACGACTCGATCGAGGGCATCTACGACACGCTCAAGCAGTGCGCGTGCA 31939 Query 94013 TCTCAAAATACGCGGGGGGAATCGGGATCAGTGTCCACGACGTACGTGCCAGGGGTTCCT 94072 |||| || | || || || ||||| |||| || ||| || | || || | | || | Sbjct 31940 TCTCCAAGTGGGCTGGCGGCATCGGCGTCAGCGTGCACAACATCCGCGCGACGAACTCGT 31999 Query 94073 ACATCCGCGGTACCAATGGCACCTCCAACGGCCTCGTCCCTATGCTCCGGGTCTTCAACA 94132 |||||||||| || || ||| | || ||||||||||| || ||||| || ||||||||| Sbjct 32000 ACATCCGCGGCACGAACGGCTCGTCGAACGGCCTCGTGCCCATGCTGCGCGTCTTCAACG 32059 Query 94133 ACGCGGCGCGCTACGTGGACCAGGGTGGTGGGAGGAGGAAGGGTTCTTTCGCGGTCTATC 94192 || ||||||||||||| |||||||| || || | | | ||||| || |||||| | || | Sbjct 32060 ACACGGCGCGCTACGTCGACCAGGGCGGCGGCAAGCGCAAGGGCTCGTTCGCGATGTACC 32119 Query 94193 TCGAGCCCTGGCACGCGGACGTGCAGGCTTTCATCGACCTGCGAAAGAACCACGGCAACG 94252 | ||||| |||||||| ||| | | ||| | ||||| |||||||||||||||| Sbjct 32120 TGGAGCCGTGGCACGCCGACATCTTCGAGTTCCTGGACCTCAAGAAGAACCACGGCAACG 32179 Query 94253 ATCTGGAGAGGGCCAGAGACCTCTTCTACGCTCTCTGGGTGCCAGACCTTTTTATGAAAC 94312 | ||| | | || | || ||||||||||| | ||| | || || || || ||||| | Sbjct 32180 AGCTGCACCGCGCGCGTGATCTCTTCTACGCGATGTGGATCCCCGATCTCTTCATGAAGC 32239 Query 94313 GCGTCGAGAAAAACTCCGCCTGGAGTCTTTTTTGTCCCAATGAATGTCCCGGACTGT--C 94370 |||||||| ||| || ||||| || || || || || || || || || | Sbjct 32240 GCGTCGAGGCCAACGGCGAGTGGAGCCTGTTCTGCCCGAACGAGGCGCCGGGGCTCTACA 32299 Query 94371 CGACGTTTGTGGATCGCGTTTTGAAGACTTGTATGCTCGTTACGAATCGC-AGGGCAAGG 94429 |||||| | || || | || || | |||| | |||| | ||| ||||| | Sbjct 32300 CGACGTGGGGCGA-CGAG-TTCGAGGCGCTGTACCACCAGTACG-AGCGCGAGGGCCGCG 32356 Query 94430 CCAGGAAGGTTATGGATGCTAGGAAGCTGTGGGATCAGATCGTGGACGTACAGGTGGAGA 94489 | | ||| || || | |||| ||| |||| | || ||| | |||| Sbjct 32357 CGCGCAAGACGATCCGCGCGCAGCAGCTCTGGTTCGCGATCCTCGAGTCGCAGATCGAGA 32416 Query 94490 CGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAGCACC 94549 |||| ||||| ||||| ||| ||||||||| |||| |||||| ||||||||| ||| Sbjct 32417 CGGGCACGCCGTACATGCTGTACAAGGACTCGTGCAACCGCAAGTCGAACCAGCAGAACC 32476 Query 94550 TCGGGGTGATCAAGAGCTCG---AATCTGTGCACCGAGATTGTCGAGTATACTTCTCCGG 94606 |||| |||| ||||| || || ||| |||| | ||||||| || || || | Sbjct 32477 TCGGCACGATC---CGCTCGAGCAACCTCTGCTGCGAGGTGCTCGAGTACACGTCGCCCG 32533 Query 94607 ACGAGATTGCTGTGTGTAACCTGGGCTCCATCAACCTGTCCACTTTCGTGCGAGATGCCT 94666 | ||| | || ||||| ||||| | |||||| ||||||| || ||| || | Sbjct 32534 ATGAGGTCGCGGTGTGCAACCTCGCGTCCATCGCGCTGTCCAAGTTTGTGACCGA---CG 32590 Query 94667 ACACGTCTACTGCTTCGTTCGATCTGGAGGAGCTTGTGAACTTCGCGGGAAGGATGGTCT 94726 ||| | | || || | || |||| || || | |||| | ||| Sbjct 32591 ACAAG---------ACCTTTGACTTCAAGAAGCTCTACGACATCAC--CAAGG-TCGTCA 32638 Query 94727 TG---AACCTGAACAGGGTAATCGACAAGAACTTCTACCCCGTCCCGGAGGCGGAGAACT 94783 | |||||||||| ||| ||||||| |||| |||||| |||| ||||| ||| | Sbjct 32639 CGCGCAACCTGAACAAGGTCATCGACATCAACTACTACCCGATCCCCGAGGCCGAGCGCA 32698 Query 94784 CAAACCTGAAGCATCGGCCCATCGGCATCGGCGTCCAGGGTTTCGCGGACGCGCTGGTGA 94843 |||||| || || || |||||||||||||| |||||| ||||||||||| | | Sbjct 32699 GCAACCTGCGCCACCGCCCGATCGGCATCGGCGTGCAGGGTCTCGCGGACGCGTTCATCC 32758 Query 94844 TGATGCGTCTGC-CCTACGACTCTGTCGACG-CGGCGGGTTTGAATTTGAACATATTCGA 94901 | ||| | || | | | ||| | ||| | | ||| | | || |||||| ||||| Sbjct 32759 TCATG-GGCTACGCGTTCGAGAGCGACGAGGCCCGCGAG-CTCAACAAGAACATCTTCGA 32816 Query 94902 AAGCATTTATTACGGGGCCATGAAACAATCCGTCCACTTGGCCAGATCGGACGG-----C 94956 | | || | || || ||| | | || | ||| || ||| |||| | Sbjct 32817 GACGCTGTACTTTGGCGCTATG----GAGGCCTCGA--TGG--AGCTCGCACGGGAGCAC 32868 Query 94957 GGGCCACACGAATCGTTCCGCGGATCGCCCTTGGAACAGGGCATTTTTCAGTTCGACCTC 95016 || || ||| | | || |||||| || ||||||| || ||||||||| | Sbjct 32869 GGCCCGTACGGCAGCTACGAGGGTTCGCCCGTGAGCAAGGGCATCTTCCAGTTCGACATG 32928 Query 95017 TGGGGTGTGAAGC---CCTCGGGTCTGTACGACTGGGAAGCTCTACGCGCTGATGTTATC 95073 ||||| || | || | |||||||| | ||||||| || || || || Sbjct 32929 TGGGGCGTCACGCCGACGTCGGGTCTCTGGGACTGGGCCGCGCTCAAGGCGAGCGTCGCG 32988 Query 95074 AAACACGGTGTGAAAAACGCGCTGCTTGTGGCCCCCATGCCCACGGCCTCCACGGCGCAG 95133 | |||| ||| ||| ||||||| | || || ||||| ||||| || || |||||| Sbjct 32989 CAGTACGGCGTGCGCAACTCGCTGCTGCTCGCGCCGATGCCGACGGCGTCGACCGCGCAG 33048 Query 95134 ATCCTTGGCAACAACGAGTCGTTCGAACCCTTCACCTCCAACGTGTACAACAGGCGGGTG 95193 ||||| ||||||||||||||| |||| || ||||| ||||| |||||||| | || ||| Sbjct 33049 ATCCTCGGCAACAACGAGTCGATCGAGCCGTTCACGACCAACATGTACAACCGCCGCGTG 33108 Query 95194 CTCGCCGGGGAATTCCCCGTCATCAACAAGCACCTCCTACGGGACCTGACGTCTCTGGGT 95253 ||||| || || ||| | || | |||||| ||||| | ||| || | || || Sbjct 33109 CTCGCTGGCGAGTTCACGATCGTGAACAAGTACCTCATGAAGGAGCTCATCGAGCTCGGC 33168 Query 95254 GTGTGGGGTGACAAGGTCAAGAACCAACTGCTACGCGCCAACGGCTCCGTCCAGAACATC 95313 | ||| | |||| ||||| | || | || | ||||||| || |||||| | Sbjct 33169 ATCTGGACGCCCGAGGTGCGCAACCAGATCCTCCACGACCACGGCTCGGTGCAGAACGTG 33228 Query 95314 CCGCAAATACCGGAGGACATCAAGGCGCTCTACAAGACCGTGTGGGAGATCCCGCAGCGC 95373 | || ||||| | | | |||| | ||||||||||||||||||||| |||| Sbjct 33229 CGCGTGATCCCGGACGCCGTGAAGGAGAAGTACAAGACCGTGTGGGAGATCAAGCAGAAG 33288 Query 95374 GTGATACTCGACCACGCGGCCGCCCGCGGGCCCTTCATCTGCCAGAGNNNNNNNNNNNNN 95433 | | |||||| || |||| |||||| ||| |||||||||||| Sbjct 33289 GCCGTGCTCGACATGGCCGCCGACCGCGGCGCCTACATCTGCCAGAGCCAGTCGCTCAAC 33348 Query 95434 NNNNNNATGGCCGAGCCCAGTCGCGGAAAAATAACGTCCATGTTGTTCTACGGGTGGAGA 95493 || || ||||| | | | || | ||||||||| ||||||| ||||| Sbjct 33349 GTGCACATCGCGGAGCCGACGATCAGCAAGCTGACGTCCATGCACTTCTACGCGTGGAAG 33408 Query 95494 AAGGGTCTCAAGACCGGTATGTATTATTTGCGAACCAGGCCAAAGGCGGACTCCATACAG 95553 |||||||||||||| || ||||| || |||| || | || ||||| ||| | || ||| Sbjct 33409 AAGGGTCTCAAGACGGGCATGTACTACCTGCGCACGCGACCGAAGGCCGACGCGATTCAG 33468 Query 95554 TTCGCCCTAGAAAAGTCGG 95572 ||| | | || ||| ||| Sbjct 33469 TTCACGGTCGACAAGGCGG 33487 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494667593112320