Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1220 145 2e-29 seq2702 129 1e-24 seq7397 93.3 1e-13 >seq1220 Length=9499 Score = 145 bits (160), Expect = 2e-29 Identities = 163/218 (75%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 || || | ||| || ||||| || ||||||||||| |||| ||||||||| | || || Sbjct 254 CGCAGACGCAGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGACAGCGTG 195 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | || || ||||||||||| || |||||||| || |||||||||||||| ||| || Sbjct 194 CGGCCGTCCTCCAGCTGCTTGCCAGCGAAGATCAGGCGCTGCTGGTCCGGCGGAATGCCC 135 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || ||||||||||| ||||| ||| |||| | ||| | | || || || | | Sbjct 134 TCCTTGTCCTGAATCTTCTGCTTGACGTTGTCGATCGAGTCCGACGGCTCCACGTCGAGC 75 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||||||||| ||||| || || ||||| || || || Sbjct 74 GTGATCGTCTTGCCCGTCAGCGTCTTCACGAAGATCTG 37 >seq2702 Length=56295 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || |||||||| ||||||||||| |||| ||||||||| | | || | || || Sbjct 26976 AGCACCAGGTGGAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGCGTGCGGCCGTCC 26917 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || |||||||| ||||||||||| || |||||||| |||||| ||||| || ||| Sbjct 26916 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCCTCCTTGTCC 26857 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| ||||| || || | | |||| | | || || || | |||||||||| Sbjct 26856 TGGATCTTCTGCTTGACATTGTCAATGCTGTCCGAAGGCTCGACGTCGAGCGTGATCGTC 26797 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || || ||||| || || || || || Sbjct 26796 TTGCCGGTCAGAGTCTTGACGAAGATCTG 26768 >seq7397 Length=9624 Score = 93.3 bits (102), Expect = 1e-13 Identities = 87/111 (78%), Gaps = 0/111 (0%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || || ||||| || ||||||||||| |||| ||||||||| | | || | || || Sbjct 4208 AGCACCAGGTGCAGCGTCGACTCCTTCTGGATGTTGTAGTCCGAAAGGGTGCGGCCGTCC 4267 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 || |||||||| ||||||||||| || |||||||| |||||| |||||| Sbjct 4268 TCGAGCTGCTTGCCGGCGAAGATCAGGCGCTGCTGATCCGGAGGGATTCCT 4318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178785776442464